Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3811 and EX28DRAFT_3812 are separated by 163 nucleotides EX28DRAFT_3812 and EX28DRAFT_3813 are separated by 129 nucleotides
EX28DRAFT_3811: EX28DRAFT_3811 - molybdopterin guanine dinucleotide-containing S/N-oxide reductases, at 14,365 to 16,692
_3811
EX28DRAFT_3812: EX28DRAFT_3812 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 16,856 to 17,518
_3812
EX28DRAFT_3813: EX28DRAFT_3813 - Transcriptional regulators, at 17,648 to 18,664
_3813
Position (kb) 16
17
18 Strain fitness (log2 ratio) -1
0
1
2 at 15.857 kb on + strand, within EX28DRAFT_3811 at 15.858 kb on - strand, within EX28DRAFT_3811 at 15.885 kb on + strand, within EX28DRAFT_3811 at 16.203 kb on - strand, within EX28DRAFT_3811 at 16.281 kb on - strand, within EX28DRAFT_3811 at 16.281 kb on - strand, within EX28DRAFT_3811 at 16.301 kb on + strand, within EX28DRAFT_3811 at 16.302 kb on - strand, within EX28DRAFT_3811 at 16.385 kb on + strand, within EX28DRAFT_3811 at 16.385 kb on + strand, within EX28DRAFT_3811 at 16.386 kb on - strand, within EX28DRAFT_3811 at 16.721 kb on - strand at 16.745 kb on - strand at 16.769 kb on + strand at 16.769 kb on + strand at 16.802 kb on + strand at 16.803 kb on - strand at 16.869 kb on + strand at 17.093 kb on + strand, within EX28DRAFT_3812 at 17.093 kb on + strand, within EX28DRAFT_3812 at 17.094 kb on - strand, within EX28DRAFT_3812 at 17.094 kb on - strand, within EX28DRAFT_3812 at 17.182 kb on + strand, within EX28DRAFT_3812 at 17.277 kb on - strand, within EX28DRAFT_3812 at 17.497 kb on + strand at 17.516 kb on + strand at 17.619 kb on + strand at 17.713 kb on + strand at 17.770 kb on + strand, within EX28DRAFT_3813 at 17.950 kb on + strand, within EX28DRAFT_3813 at 17.954 kb on - strand, within EX28DRAFT_3813 at 17.985 kb on - strand, within EX28DRAFT_3813 at 18.005 kb on + strand, within EX28DRAFT_3813 at 18.006 kb on - strand, within EX28DRAFT_3813 at 18.006 kb on - strand, within EX28DRAFT_3813 at 18.085 kb on + strand, within EX28DRAFT_3813 at 18.086 kb on - strand, within EX28DRAFT_3813
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 15,857 + EX28DRAFT_3811 0.64 -0.3 15,858 - EX28DRAFT_3811 0.64 +0.3 15,885 + EX28DRAFT_3811 0.65 -0.5 16,203 - EX28DRAFT_3811 0.79 -0.2 16,281 - EX28DRAFT_3811 0.82 +0.6 16,281 - EX28DRAFT_3811 0.82 +1.0 16,301 + EX28DRAFT_3811 0.83 +0.2 16,302 - EX28DRAFT_3811 0.83 +0.2 16,385 + EX28DRAFT_3811 0.87 +1.8 16,385 + EX28DRAFT_3811 0.87 -1.0 16,386 - EX28DRAFT_3811 0.87 -0.2 16,721 - +0.8 16,745 - +0.4 16,769 + +0.5 16,769 + -0.5 16,802 + +0.3 16,803 - +1.1 16,869 + -0.7 17,093 + EX28DRAFT_3812 0.36 +0.9 17,093 + EX28DRAFT_3812 0.36 +0.8 17,094 - EX28DRAFT_3812 0.36 -1.7 17,094 - EX28DRAFT_3812 0.36 -1.1 17,182 + EX28DRAFT_3812 0.49 +0.2 17,277 - EX28DRAFT_3812 0.63 +0.2 17,497 + -0.7 17,516 + -1.2 17,619 + +0.3 17,713 + +0.2 17,770 + EX28DRAFT_3813 0.12 +0.6 17,950 + EX28DRAFT_3813 0.30 +0.1 17,954 - EX28DRAFT_3813 0.30 -0.4 17,985 - EX28DRAFT_3813 0.33 +0.5 18,005 + EX28DRAFT_3813 0.35 -0.1 18,006 - EX28DRAFT_3813 0.35 +0.9 18,006 - EX28DRAFT_3813 0.35 -1.3 18,085 + EX28DRAFT_3813 0.43 -0.3 18,086 - EX28DRAFT_3813 0.43 -0.0
Or see this region's nucleotide sequence