Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3749 and EX28DRAFT_3750 are separated by 131 nucleotides EX28DRAFT_3750 and EX28DRAFT_3751 are separated by 146 nucleotides
EX28DRAFT_3749: EX28DRAFT_3749 - deoxyguanosinetriphosphate triphosphohydrolase, putative, at 427,912 to 429,426
_3749
EX28DRAFT_3750: EX28DRAFT_3750 - periplasmic serine protease, Do/DeqQ family, at 429,558 to 430,994
_3750
EX28DRAFT_3751: EX28DRAFT_3751 - Sugar diacid utilization regulator, at 431,141 to 432,298
_3751
Position (kb) 429
430
431 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 428.594 kb on - strand, within EX28DRAFT_3749 at 428.594 kb on - strand, within EX28DRAFT_3749 at 428.617 kb on + strand, within EX28DRAFT_3749 at 428.618 kb on - strand, within EX28DRAFT_3749 at 428.637 kb on + strand, within EX28DRAFT_3749 at 428.701 kb on - strand, within EX28DRAFT_3749 at 428.718 kb on + strand, within EX28DRAFT_3749 at 428.719 kb on - strand, within EX28DRAFT_3749 at 428.883 kb on - strand, within EX28DRAFT_3749 at 428.893 kb on - strand, within EX28DRAFT_3749 at 428.893 kb on - strand, within EX28DRAFT_3749 at 428.910 kb on + strand, within EX28DRAFT_3749 at 428.911 kb on - strand, within EX28DRAFT_3749 at 428.911 kb on - strand, within EX28DRAFT_3749 at 428.911 kb on - strand, within EX28DRAFT_3749 at 428.914 kb on + strand, within EX28DRAFT_3749 at 428.915 kb on - strand, within EX28DRAFT_3749 at 428.915 kb on - strand, within EX28DRAFT_3749 at 428.928 kb on + strand, within EX28DRAFT_3749 at 428.928 kb on + strand, within EX28DRAFT_3749 at 428.928 kb on + strand, within EX28DRAFT_3749 at 428.933 kb on + strand, within EX28DRAFT_3749 at 428.938 kb on - strand, within EX28DRAFT_3749 at 429.057 kb on + strand, within EX28DRAFT_3749 at 429.081 kb on - strand, within EX28DRAFT_3749 at 429.081 kb on - strand, within EX28DRAFT_3749 at 429.222 kb on - strand, within EX28DRAFT_3749 at 429.274 kb on + strand, within EX28DRAFT_3749 at 429.275 kb on - strand at 429.275 kb on - strand at 429.331 kb on + strand at 429.331 kb on + strand at 429.331 kb on + strand at 429.332 kb on - strand at 429.334 kb on + strand at 429.335 kb on - strand at 429.335 kb on - strand at 429.351 kb on + strand at 429.361 kb on + strand at 429.361 kb on + strand at 429.362 kb on - strand at 429.364 kb on - strand at 429.385 kb on + strand at 429.424 kb on + strand at 429.491 kb on - strand at 429.722 kb on + strand, within EX28DRAFT_3750 at 429.722 kb on + strand, within EX28DRAFT_3750 at 429.722 kb on + strand, within EX28DRAFT_3750 at 429.723 kb on - strand, within EX28DRAFT_3750 at 429.752 kb on + strand, within EX28DRAFT_3750 at 429.753 kb on - strand, within EX28DRAFT_3750 at 429.923 kb on + strand, within EX28DRAFT_3750 at 429.924 kb on - strand, within EX28DRAFT_3750 at 429.924 kb on - strand, within EX28DRAFT_3750 at 429.942 kb on + strand, within EX28DRAFT_3750 at 429.942 kb on + strand, within EX28DRAFT_3750 at 429.943 kb on - strand, within EX28DRAFT_3750 at 430.134 kb on + strand, within EX28DRAFT_3750 at 430.380 kb on - strand, within EX28DRAFT_3750 at 430.653 kb on - strand, within EX28DRAFT_3750 at 430.682 kb on + strand, within EX28DRAFT_3750 at 431.110 kb on + strand at 431.138 kb on + strand at 431.138 kb on + strand at 431.139 kb on - strand at 431.180 kb on - strand at 431.181 kb on - strand at 431.209 kb on + strand at 431.209 kb on + strand at 431.216 kb on - strand at 431.223 kb on + strand at 431.468 kb on - strand, within EX28DRAFT_3751 at 431.558 kb on - strand, within EX28DRAFT_3751 at 431.575 kb on + strand, within EX28DRAFT_3751 at 431.575 kb on + strand, within EX28DRAFT_3751 at 431.576 kb on - strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.990 kb on + strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 428,594 - EX28DRAFT_3749 0.45 -0.4 428,594 - EX28DRAFT_3749 0.45 -0.6 428,617 + EX28DRAFT_3749 0.47 +0.3 428,618 - EX28DRAFT_3749 0.47 +0.6 428,637 + EX28DRAFT_3749 0.48 -0.8 428,701 - EX28DRAFT_3749 0.52 +0.2 428,718 + EX28DRAFT_3749 0.53 -1.2 428,719 - EX28DRAFT_3749 0.53 -0.5 428,883 - EX28DRAFT_3749 0.64 -1.0 428,893 - EX28DRAFT_3749 0.65 -0.5 428,893 - EX28DRAFT_3749 0.65 -0.0 428,910 + EX28DRAFT_3749 0.66 +0.3 428,911 - EX28DRAFT_3749 0.66 +3.3 428,911 - EX28DRAFT_3749 0.66 -0.8 428,911 - EX28DRAFT_3749 0.66 +1.8 428,914 + EX28DRAFT_3749 0.66 -0.4 428,915 - EX28DRAFT_3749 0.66 +0.4 428,915 - EX28DRAFT_3749 0.66 -0.5 428,928 + EX28DRAFT_3749 0.67 +1.7 428,928 + EX28DRAFT_3749 0.67 +0.3 428,928 + EX28DRAFT_3749 0.67 +1.1 428,933 + EX28DRAFT_3749 0.67 +1.5 428,938 - EX28DRAFT_3749 0.68 -0.1 429,057 + EX28DRAFT_3749 0.76 +1.7 429,081 - EX28DRAFT_3749 0.77 +0.9 429,081 - EX28DRAFT_3749 0.77 -3.1 429,222 - EX28DRAFT_3749 0.86 +0.4 429,274 + EX28DRAFT_3749 0.90 -0.1 429,275 - +1.3 429,275 - -1.9 429,331 + +0.7 429,331 + +0.6 429,331 + +1.5 429,332 - +0.5 429,334 + +0.3 429,335 - +0.4 429,335 - -0.3 429,351 + +1.1 429,361 + +0.2 429,361 + -0.8 429,362 - +1.3 429,364 - +0.2 429,385 + +0.6 429,424 + -0.6 429,491 - -2.7 429,722 + EX28DRAFT_3750 0.11 +0.8 429,722 + EX28DRAFT_3750 0.11 -3.7 429,722 + EX28DRAFT_3750 0.11 -0.2 429,723 - EX28DRAFT_3750 0.11 -0.7 429,752 + EX28DRAFT_3750 0.14 -0.7 429,753 - EX28DRAFT_3750 0.14 -1.1 429,923 + EX28DRAFT_3750 0.25 +0.1 429,924 - EX28DRAFT_3750 0.25 +0.3 429,924 - EX28DRAFT_3750 0.25 -1.0 429,942 + EX28DRAFT_3750 0.27 +0.2 429,942 + EX28DRAFT_3750 0.27 -0.7 429,943 - EX28DRAFT_3750 0.27 -0.3 430,134 + EX28DRAFT_3750 0.40 +0.2 430,380 - EX28DRAFT_3750 0.57 +0.3 430,653 - EX28DRAFT_3750 0.76 -0.5 430,682 + EX28DRAFT_3750 0.78 +1.0 431,110 + -1.0 431,138 + +0.1 431,138 + -0.5 431,139 - -1.8 431,180 - +0.3 431,181 - +1.4 431,209 + -2.7 431,209 + -2.0 431,216 - -0.6 431,223 + +0.6 431,468 - EX28DRAFT_3751 0.28 -1.1 431,558 - EX28DRAFT_3751 0.36 +0.2 431,575 + EX28DRAFT_3751 0.37 +1.7 431,575 + EX28DRAFT_3751 0.37 +1.1 431,576 - EX28DRAFT_3751 0.38 +0.6 431,897 + EX28DRAFT_3751 0.65 +0.7 431,897 + EX28DRAFT_3751 0.65 -0.1 431,897 + EX28DRAFT_3751 0.65 +0.0 431,897 + EX28DRAFT_3751 0.65 +0.4 431,898 - EX28DRAFT_3751 0.65 +1.3 431,898 - EX28DRAFT_3751 0.65 +0.4 431,898 - EX28DRAFT_3751 0.65 -0.4 431,990 + EX28DRAFT_3751 0.73 +0.5 431,991 - EX28DRAFT_3751 0.73 -0.4 431,991 - EX28DRAFT_3751 0.73 +0.1 431,991 - EX28DRAFT_3751 0.73 +1.1 431,991 - EX28DRAFT_3751 0.73 +0.1
Or see this region's nucleotide sequence