Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3356 and EX28DRAFT_3357 are separated by 44 nucleotides EX28DRAFT_3357 and EX28DRAFT_3358 are separated by 19 nucleotides
EX28DRAFT_3356: EX28DRAFT_3356 - EF-P lysine aminoacylase GenX, at 22,442 to 23,419
_3356
EX28DRAFT_3357: EX28DRAFT_3357 - Small-conductance mechanosensitive channel, at 23,464 to 26,787
_3357
EX28DRAFT_3358: EX28DRAFT_3358 - phosphatidylserine decarboxylase precursor, at 26,807 to 27,775
_3358
Position (kb) 23
24
25
26
27 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 23.428 kb on - strand at 23.569 kb on - strand at 23.569 kb on - strand at 23.631 kb on + strand at 23.654 kb on + strand at 23.658 kb on + strand at 23.690 kb on - strand at 23.704 kb on + strand at 23.704 kb on + strand at 23.705 kb on - strand at 23.705 kb on - strand at 23.705 kb on - strand at 23.757 kb on - strand at 23.983 kb on - strand, within EX28DRAFT_3357 at 24.043 kb on + strand, within EX28DRAFT_3357 at 24.044 kb on - strand, within EX28DRAFT_3357 at 24.061 kb on + strand, within EX28DRAFT_3357 at 24.061 kb on + strand, within EX28DRAFT_3357 at 24.062 kb on - strand, within EX28DRAFT_3357 at 24.152 kb on + strand, within EX28DRAFT_3357 at 24.152 kb on + strand, within EX28DRAFT_3357 at 24.152 kb on + strand, within EX28DRAFT_3357 at 24.152 kb on + strand, within EX28DRAFT_3357 at 24.194 kb on - strand, within EX28DRAFT_3357 at 24.301 kb on - strand, within EX28DRAFT_3357 at 24.645 kb on - strand, within EX28DRAFT_3357 at 24.719 kb on + strand, within EX28DRAFT_3357 at 24.719 kb on + strand, within EX28DRAFT_3357 at 24.822 kb on - strand, within EX28DRAFT_3357 at 24.878 kb on - strand, within EX28DRAFT_3357 at 24.989 kb on + strand, within EX28DRAFT_3357 at 24.989 kb on + strand, within EX28DRAFT_3357 at 24.990 kb on - strand, within EX28DRAFT_3357 at 24.993 kb on - strand, within EX28DRAFT_3357 at 25.567 kb on + strand, within EX28DRAFT_3357 at 25.657 kb on - strand, within EX28DRAFT_3357 at 25.722 kb on + strand, within EX28DRAFT_3357 at 26.127 kb on - strand, within EX28DRAFT_3357 at 26.292 kb on + strand, within EX28DRAFT_3357 at 26.331 kb on + strand, within EX28DRAFT_3357 at 26.332 kb on - strand, within EX28DRAFT_3357 at 26.582 kb on + strand at 26.583 kb on - strand at 26.768 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 23,428 - -0.0 23,569 - +0.2 23,569 - +0.2 23,631 + -2.6 23,654 + +0.4 23,658 + -2.7 23,690 - +0.1 23,704 + -1.7 23,704 + +0.5 23,705 - -0.0 23,705 - -0.7 23,705 - -0.7 23,757 - -2.1 23,983 - EX28DRAFT_3357 0.16 -2.6 24,043 + EX28DRAFT_3357 0.17 +1.0 24,044 - EX28DRAFT_3357 0.17 +0.6 24,061 + EX28DRAFT_3357 0.18 -0.4 24,061 + EX28DRAFT_3357 0.18 +0.1 24,062 - EX28DRAFT_3357 0.18 +0.2 24,152 + EX28DRAFT_3357 0.21 +2.3 24,152 + EX28DRAFT_3357 0.21 +1.0 24,152 + EX28DRAFT_3357 0.21 +0.1 24,152 + EX28DRAFT_3357 0.21 +0.2 24,194 - EX28DRAFT_3357 0.22 +0.1 24,301 - EX28DRAFT_3357 0.25 +1.2 24,645 - EX28DRAFT_3357 0.36 -0.0 24,719 + EX28DRAFT_3357 0.38 -0.4 24,719 + EX28DRAFT_3357 0.38 -0.8 24,822 - EX28DRAFT_3357 0.41 -0.4 24,878 - EX28DRAFT_3357 0.43 -0.8 24,989 + EX28DRAFT_3357 0.46 -0.9 24,989 + EX28DRAFT_3357 0.46 +0.3 24,990 - EX28DRAFT_3357 0.46 -3.8 24,993 - EX28DRAFT_3357 0.46 -0.9 25,567 + EX28DRAFT_3357 0.63 +0.2 25,657 - EX28DRAFT_3357 0.66 +0.7 25,722 + EX28DRAFT_3357 0.68 +0.3 26,127 - EX28DRAFT_3357 0.80 +1.3 26,292 + EX28DRAFT_3357 0.85 -3.4 26,331 + EX28DRAFT_3357 0.86 -0.3 26,332 - EX28DRAFT_3357 0.86 -0.3 26,582 + -0.4 26,583 - -0.0 26,768 - -0.7
Or see this region's nucleotide sequence