Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2857 and EX28DRAFT_2858 are separated by 165 nucleotides EX28DRAFT_2858 and EX28DRAFT_2859 overlap by 44 nucleotides EX28DRAFT_2859 and EX28DRAFT_2860 are separated by 219 nucleotides
EX28DRAFT_2857: EX28DRAFT_2857 - PTS system, glucose-like IIB component, at 158,663 to 160,222
_2857
EX28DRAFT_2858: EX28DRAFT_2858 - transcriptional regulator, RpiR family, at 160,388 to 161,212
_2858
EX28DRAFT_2859: EX28DRAFT_2859 - hypothetical protein, at 161,169 to 161,351
_2859
EX28DRAFT_2860: EX28DRAFT_2860 - Male sterility protein, at 161,571 to 162,680
_2860
Position (kb) 160
161
162 Strain fitness (log2 ratio) -2
-1
0
1 at 159.496 kb on - strand, within EX28DRAFT_2857 at 159.496 kb on - strand, within EX28DRAFT_2857 at 159.496 kb on - strand, within EX28DRAFT_2857 at 159.546 kb on + strand, within EX28DRAFT_2857 at 159.672 kb on - strand, within EX28DRAFT_2857 at 160.103 kb on + strand at 160.357 kb on + strand at 160.358 kb on - strand at 160.377 kb on - strand at 160.500 kb on - strand, within EX28DRAFT_2858 at 160.587 kb on - strand, within EX28DRAFT_2858 at 160.775 kb on + strand, within EX28DRAFT_2858 at 160.817 kb on + strand, within EX28DRAFT_2858 at 161.073 kb on + strand, within EX28DRAFT_2858 at 161.073 kb on + strand, within EX28DRAFT_2858 at 161.095 kb on + strand, within EX28DRAFT_2858 at 161.249 kb on + strand, within EX28DRAFT_2859 at 161.249 kb on + strand, within EX28DRAFT_2859 at 161.555 kb on + strand at 161.570 kb on - strand at 161.581 kb on + strand at 161.768 kb on + strand, within EX28DRAFT_2860 at 161.769 kb on - strand, within EX28DRAFT_2860 at 161.772 kb on - strand, within EX28DRAFT_2860 at 161.846 kb on + strand, within EX28DRAFT_2860 at 161.847 kb on - strand, within EX28DRAFT_2860 at 162.058 kb on - strand, within EX28DRAFT_2860
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 159,496 - EX28DRAFT_2857 0.53 +0.3 159,496 - EX28DRAFT_2857 0.53 +1.1 159,496 - EX28DRAFT_2857 0.53 -0.0 159,546 + EX28DRAFT_2857 0.57 -1.3 159,672 - EX28DRAFT_2857 0.65 -0.9 160,103 + -2.0 160,357 + +0.1 160,358 - +0.3 160,377 - -0.1 160,500 - EX28DRAFT_2858 0.14 +0.7 160,587 - EX28DRAFT_2858 0.24 -0.6 160,775 + EX28DRAFT_2858 0.47 +0.3 160,817 + EX28DRAFT_2858 0.52 -0.5 161,073 + EX28DRAFT_2858 0.83 +0.1 161,073 + EX28DRAFT_2858 0.83 -1.1 161,095 + EX28DRAFT_2858 0.86 -0.7 161,249 + EX28DRAFT_2859 0.44 +0.5 161,249 + EX28DRAFT_2859 0.44 -1.3 161,555 + +0.3 161,570 - -0.5 161,581 + +0.3 161,768 + EX28DRAFT_2860 0.18 -0.1 161,769 - EX28DRAFT_2860 0.18 -0.4 161,772 - EX28DRAFT_2860 0.18 -0.5 161,846 + EX28DRAFT_2860 0.25 -0.1 161,847 - EX28DRAFT_2860 0.25 -0.7 162,058 - EX28DRAFT_2860 0.44 -0.3
Or see this region's nucleotide sequence