Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2463 and EX28DRAFT_2464 overlap by 4 nucleotides EX28DRAFT_2464 and EX28DRAFT_2465 are separated by 0 nucleotides EX28DRAFT_2465 and EX28DRAFT_2466 are separated by 28 nucleotides EX28DRAFT_2466 and EX28DRAFT_2467 are separated by 58 nucleotides
EX28DRAFT_2463: EX28DRAFT_2463 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 2,492,307 to 2,494,721
_2463
EX28DRAFT_2464: EX28DRAFT_2464 - Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component, at 2,494,718 to 2,495,404
_2464
EX28DRAFT_2465: EX28DRAFT_2465 - Lysophospholipase L1 and related esterases, at 2,495,405 to 2,495,998
_2465
EX28DRAFT_2466: EX28DRAFT_2466 - Short-chain dehydrogenases of various substrate specificities, at 2,496,027 to 2,496,797
_2466
EX28DRAFT_2467: EX28DRAFT_2467 - Thioredoxin domain-containing protein, at 2,496,856 to 2,497,710
_2467
Position (kb)
2495
2496 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2494.405 kb on + strand, within EX28DRAFT_2463 at 2494.409 kb on + strand, within EX28DRAFT_2463 at 2494.738 kb on + strand at 2495.113 kb on + strand, within EX28DRAFT_2464 at 2495.327 kb on - strand, within EX28DRAFT_2464 at 2495.786 kb on + strand, within EX28DRAFT_2465 at 2495.786 kb on + strand, within EX28DRAFT_2465 at 2495.787 kb on - strand, within EX28DRAFT_2465 at 2495.787 kb on - strand, within EX28DRAFT_2465 at 2495.798 kb on + strand, within EX28DRAFT_2465 at 2495.801 kb on - strand, within EX28DRAFT_2465 at 2495.822 kb on + strand, within EX28DRAFT_2465 at 2495.822 kb on + strand, within EX28DRAFT_2465 at 2495.823 kb on - strand, within EX28DRAFT_2465 at 2495.823 kb on - strand, within EX28DRAFT_2465 at 2495.945 kb on - strand at 2496.020 kb on + strand at 2496.021 kb on - strand at 2496.044 kb on - strand at 2496.739 kb on + strand at 2496.825 kb on + strand at 2496.825 kb on + strand at 2496.826 kb on - strand at 2496.826 kb on - strand at 2496.826 kb on - strand at 2496.826 kb on - strand at 2496.880 kb on - strand at 2496.940 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,494,405 + EX28DRAFT_2463 0.87 -0.9 2,494,409 + EX28DRAFT_2463 0.87 +0.5 2,494,738 + -1.9 2,495,113 + EX28DRAFT_2464 0.57 -2.0 2,495,327 - EX28DRAFT_2464 0.89 -0.4 2,495,786 + EX28DRAFT_2465 0.64 -1.5 2,495,786 + EX28DRAFT_2465 0.64 -2.0 2,495,787 - EX28DRAFT_2465 0.64 -0.7 2,495,787 - EX28DRAFT_2465 0.64 -0.6 2,495,798 + EX28DRAFT_2465 0.66 +0.5 2,495,801 - EX28DRAFT_2465 0.67 +0.0 2,495,822 + EX28DRAFT_2465 0.70 -0.6 2,495,822 + EX28DRAFT_2465 0.70 -0.2 2,495,823 - EX28DRAFT_2465 0.70 -0.4 2,495,823 - EX28DRAFT_2465 0.70 +0.2 2,495,945 - +0.5 2,496,020 + +0.0 2,496,021 - -1.1 2,496,044 - +0.1 2,496,739 + +0.5 2,496,825 + -3.1 2,496,825 + -0.2 2,496,826 - -0.1 2,496,826 - +0.1 2,496,826 - +0.4 2,496,826 - -0.4 2,496,880 - +0.1 2,496,940 + -2.3
Or see this region's nucleotide sequence