Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2102 and EX28DRAFT_2103 are separated by 184 nucleotides EX28DRAFT_2103 and EX28DRAFT_2104 are separated by 30 nucleotides EX28DRAFT_2104 and EX28DRAFT_2105 are separated by 273 nucleotides
EX28DRAFT_2102: EX28DRAFT_2102 - Nitroreductase, at 2,125,917 to 2,126,639
_2102
EX28DRAFT_2103: EX28DRAFT_2103 - Glutaredoxin, GrxA family, at 2,126,824 to 2,127,093
_2103
EX28DRAFT_2104: EX28DRAFT_2104 - Putative inner membrane protein of Enterobacteriaceae, at 2,127,124 to 2,127,498
_2104
EX28DRAFT_2105: EX28DRAFT_2105 - Predicted permease, at 2,127,772 to 2,129,457
_2105
Position (kb)
2127
2128 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2126.241 kb on - strand, within EX28DRAFT_2102 at 2126.257 kb on + strand, within EX28DRAFT_2102 at 2126.257 kb on + strand, within EX28DRAFT_2102 at 2126.258 kb on - strand, within EX28DRAFT_2102 at 2126.546 kb on + strand, within EX28DRAFT_2102 at 2126.625 kb on + strand at 2126.682 kb on + strand at 2126.683 kb on - strand at 2126.704 kb on - strand at 2126.704 kb on - strand at 2126.704 kb on - strand at 2126.718 kb on - strand at 2126.718 kb on - strand at 2126.723 kb on + strand at 2126.723 kb on + strand at 2126.723 kb on + strand at 2126.724 kb on - strand at 2126.728 kb on + strand at 2126.779 kb on + strand at 2126.779 kb on + strand at 2126.780 kb on - strand at 2126.780 kb on - strand at 2126.780 kb on - strand at 2126.781 kb on + strand at 2126.781 kb on + strand at 2126.782 kb on - strand at 2126.782 kb on - strand at 2126.782 kb on - strand at 2126.782 kb on - strand at 2126.788 kb on + strand at 2126.789 kb on - strand at 2127.091 kb on + strand at 2127.125 kb on + strand at 2127.147 kb on + strand at 2127.156 kb on + strand at 2127.157 kb on - strand at 2127.170 kb on + strand, within EX28DRAFT_2104 at 2127.170 kb on + strand, within EX28DRAFT_2104 at 2127.171 kb on - strand, within EX28DRAFT_2104 at 2127.247 kb on + strand, within EX28DRAFT_2104 at 2127.251 kb on + strand, within EX28DRAFT_2104 at 2127.251 kb on + strand, within EX28DRAFT_2104 at 2127.251 kb on + strand, within EX28DRAFT_2104 at 2127.252 kb on - strand, within EX28DRAFT_2104 at 2127.447 kb on + strand, within EX28DRAFT_2104 at 2127.489 kb on + strand at 2127.489 kb on + strand at 2127.514 kb on + strand at 2127.514 kb on + strand at 2127.515 kb on - strand at 2127.528 kb on - strand at 2127.608 kb on + strand at 2127.608 kb on + strand at 2127.608 kb on + strand at 2127.609 kb on - strand at 2127.612 kb on + strand at 2127.627 kb on - strand at 2127.659 kb on + strand at 2127.667 kb on - strand at 2127.797 kb on + strand at 2127.808 kb on + strand at 2127.821 kb on + strand at 2127.822 kb on - strand at 2127.914 kb on + strand at 2127.978 kb on + strand, within EX28DRAFT_2105 at 2128.395 kb on + strand, within EX28DRAFT_2105 at 2128.402 kb on + strand, within EX28DRAFT_2105
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,126,241 - EX28DRAFT_2102 0.45 +0.5 2,126,257 + EX28DRAFT_2102 0.47 -0.1 2,126,257 + EX28DRAFT_2102 0.47 -3.4 2,126,258 - EX28DRAFT_2102 0.47 +0.6 2,126,546 + EX28DRAFT_2102 0.87 -3.6 2,126,625 + +0.9 2,126,682 + +0.2 2,126,683 - -0.0 2,126,704 - +0.5 2,126,704 - -0.2 2,126,704 - +1.2 2,126,718 - +0.0 2,126,718 - +0.2 2,126,723 + +0.8 2,126,723 + -0.7 2,126,723 + -1.3 2,126,724 - +0.5 2,126,728 + -0.3 2,126,779 + -0.5 2,126,779 + +0.2 2,126,780 - +0.3 2,126,780 - +0.6 2,126,780 - +0.6 2,126,781 + +1.3 2,126,781 + -0.0 2,126,782 - +0.3 2,126,782 - +0.6 2,126,782 - +0.2 2,126,782 - -0.1 2,126,788 + -0.4 2,126,789 - +0.7 2,127,091 + -0.8 2,127,125 + -0.8 2,127,147 + -0.4 2,127,156 + +2.2 2,127,157 - +0.3 2,127,170 + EX28DRAFT_2104 0.12 -0.7 2,127,170 + EX28DRAFT_2104 0.12 -0.2 2,127,171 - EX28DRAFT_2104 0.13 +0.1 2,127,247 + EX28DRAFT_2104 0.33 +0.5 2,127,251 + EX28DRAFT_2104 0.34 -0.5 2,127,251 + EX28DRAFT_2104 0.34 -2.7 2,127,251 + EX28DRAFT_2104 0.34 -0.5 2,127,252 - EX28DRAFT_2104 0.34 -0.5 2,127,447 + EX28DRAFT_2104 0.86 -0.2 2,127,489 + +0.2 2,127,489 + -0.5 2,127,514 + -0.3 2,127,514 + -0.1 2,127,515 - -0.0 2,127,528 - +2.3 2,127,608 + +0.0 2,127,608 + -0.1 2,127,608 + -2.4 2,127,609 - -1.4 2,127,612 + -0.5 2,127,627 - -0.2 2,127,659 + +1.5 2,127,667 - +0.6 2,127,797 + -1.7 2,127,808 + +1.9 2,127,821 + +0.4 2,127,822 - +0.7 2,127,914 + +0.3 2,127,978 + EX28DRAFT_2105 0.12 -0.8 2,128,395 + EX28DRAFT_2105 0.37 +1.2 2,128,402 + EX28DRAFT_2105 0.37 -1.5
Or see this region's nucleotide sequence