Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1684 and EX28DRAFT_1685 overlap by 26 nucleotides EX28DRAFT_1685 and EX28DRAFT_1686 are separated by 9 nucleotides
EX28DRAFT_1684: EX28DRAFT_1684 - FeS assembly protein SufD, at 1,696,439 to 1,697,710
_1684
EX28DRAFT_1685: EX28DRAFT_1685 - FeS assembly ATPase SufC, at 1,697,685 to 1,698,431
_1685
EX28DRAFT_1686: EX28DRAFT_1686 - FeS assembly protein SufB, at 1,698,441 to 1,699,931
_1686
Position (kb) 1697
1698
1699 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 1696.807 kb on + strand, within EX28DRAFT_1684 at 1696.986 kb on + strand, within EX28DRAFT_1684 at 1696.986 kb on + strand, within EX28DRAFT_1684 at 1696.987 kb on - strand, within EX28DRAFT_1684 at 1697.010 kb on - strand, within EX28DRAFT_1684 at 1697.558 kb on - strand, within EX28DRAFT_1684 at 1697.559 kb on + strand, within EX28DRAFT_1684 at 1697.579 kb on - strand, within EX28DRAFT_1684 at 1697.686 kb on + strand at 1697.687 kb on - strand at 1697.687 kb on - strand at 1697.700 kb on - strand at 1697.762 kb on + strand, within EX28DRAFT_1685 at 1697.762 kb on + strand, within EX28DRAFT_1685 at 1697.803 kb on + strand, within EX28DRAFT_1685 at 1697.803 kb on + strand, within EX28DRAFT_1685 at 1697.928 kb on + strand, within EX28DRAFT_1685 at 1697.928 kb on + strand, within EX28DRAFT_1685 at 1697.972 kb on + strand, within EX28DRAFT_1685 at 1698.275 kb on - strand, within EX28DRAFT_1685 at 1698.399 kb on + strand at 1698.427 kb on - strand at 1698.590 kb on - strand, within EX28DRAFT_1686 at 1698.667 kb on + strand, within EX28DRAFT_1686 at 1698.677 kb on + strand, within EX28DRAFT_1686 at 1698.678 kb on - strand, within EX28DRAFT_1686 at 1699.088 kb on - strand, within EX28DRAFT_1686 at 1699.088 kb on - strand, within EX28DRAFT_1686 at 1699.144 kb on + strand, within EX28DRAFT_1686 at 1699.258 kb on + strand, within EX28DRAFT_1686 at 1699.258 kb on + strand, within EX28DRAFT_1686 at 1699.300 kb on + strand, within EX28DRAFT_1686 at 1699.301 kb on - strand, within EX28DRAFT_1686 at 1699.301 kb on - strand, within EX28DRAFT_1686 at 1699.301 kb on - strand, within EX28DRAFT_1686 at 1699.304 kb on + strand, within EX28DRAFT_1686 at 1699.305 kb on - strand, within EX28DRAFT_1686 at 1699.305 kb on - strand, within EX28DRAFT_1686 at 1699.305 kb on - strand, within EX28DRAFT_1686 at 1699.381 kb on + strand, within EX28DRAFT_1686
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,696,807 + EX28DRAFT_1684 0.29 -3.4 1,696,986 + EX28DRAFT_1684 0.43 -3.6 1,696,986 + EX28DRAFT_1684 0.43 -2.0 1,696,987 - EX28DRAFT_1684 0.43 -2.2 1,697,010 - EX28DRAFT_1684 0.45 -0.3 1,697,558 - EX28DRAFT_1684 0.88 -3.3 1,697,559 + EX28DRAFT_1684 0.88 -1.4 1,697,579 - EX28DRAFT_1684 0.90 -5.9 1,697,686 + -2.0 1,697,687 - -1.9 1,697,687 - -0.5 1,697,700 - -3.4 1,697,762 + EX28DRAFT_1685 0.10 -0.5 1,697,762 + EX28DRAFT_1685 0.10 -4.4 1,697,803 + EX28DRAFT_1685 0.16 -1.3 1,697,803 + EX28DRAFT_1685 0.16 -0.2 1,697,928 + EX28DRAFT_1685 0.33 -1.9 1,697,928 + EX28DRAFT_1685 0.33 -2.1 1,697,972 + EX28DRAFT_1685 0.38 -1.4 1,698,275 - EX28DRAFT_1685 0.79 -3.2 1,698,399 + -1.7 1,698,427 - -4.6 1,698,590 - EX28DRAFT_1686 0.10 -3.0 1,698,667 + EX28DRAFT_1686 0.15 -0.1 1,698,677 + EX28DRAFT_1686 0.16 -5.3 1,698,678 - EX28DRAFT_1686 0.16 +0.0 1,699,088 - EX28DRAFT_1686 0.43 -4.9 1,699,088 - EX28DRAFT_1686 0.43 -3.9 1,699,144 + EX28DRAFT_1686 0.47 -3.1 1,699,258 + EX28DRAFT_1686 0.55 -3.3 1,699,258 + EX28DRAFT_1686 0.55 -3.9 1,699,300 + EX28DRAFT_1686 0.58 -2.3 1,699,301 - EX28DRAFT_1686 0.58 -2.3 1,699,301 - EX28DRAFT_1686 0.58 -1.9 1,699,301 - EX28DRAFT_1686 0.58 -2.8 1,699,304 + EX28DRAFT_1686 0.58 -2.6 1,699,305 - EX28DRAFT_1686 0.58 +0.3 1,699,305 - EX28DRAFT_1686 0.58 -1.4 1,699,305 - EX28DRAFT_1686 0.58 -2.1 1,699,381 + EX28DRAFT_1686 0.63 +0.3
Or see this region's nucleotide sequence