Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1371 and EX28DRAFT_1372 overlap by 4 nucleotides EX28DRAFT_1372 and EX28DRAFT_1373 are separated by 1 nucleotides
EX28DRAFT_1371: EX28DRAFT_1371 - Cyclopropane fatty acid synthase and related methyltransferases, at 1,386,661 to 1,387,881
_1371
EX28DRAFT_1372: EX28DRAFT_1372 - Uncharacterized conserved protein, at 1,387,878 to 1,388,600
_1372
EX28DRAFT_1373: EX28DRAFT_1373 - Predicted NAD/FAD-binding protein, at 1,388,602 to 1,389,861
_1373
Position (kb)
1387
1388
1389 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1386.941 kb on + strand, within EX28DRAFT_1371 at 1387.140 kb on - strand, within EX28DRAFT_1371 at 1387.206 kb on + strand, within EX28DRAFT_1371 at 1387.206 kb on + strand, within EX28DRAFT_1371 at 1387.206 kb on + strand, within EX28DRAFT_1371 at 1387.206 kb on + strand, within EX28DRAFT_1371 at 1387.207 kb on - strand, within EX28DRAFT_1371 at 1387.207 kb on - strand, within EX28DRAFT_1371 at 1387.207 kb on - strand, within EX28DRAFT_1371 at 1387.207 kb on - strand, within EX28DRAFT_1371 at 1387.208 kb on + strand, within EX28DRAFT_1371 at 1387.208 kb on + strand, within EX28DRAFT_1371 at 1387.209 kb on - strand, within EX28DRAFT_1371 at 1387.209 kb on - strand, within EX28DRAFT_1371 at 1387.265 kb on + strand, within EX28DRAFT_1371 at 1387.321 kb on + strand, within EX28DRAFT_1371 at 1387.439 kb on + strand, within EX28DRAFT_1371 at 1387.439 kb on + strand, within EX28DRAFT_1371 at 1387.439 kb on + strand, within EX28DRAFT_1371 at 1387.439 kb on + strand, within EX28DRAFT_1371 at 1387.460 kb on + strand, within EX28DRAFT_1371 at 1387.859 kb on - strand at 1387.911 kb on - strand at 1387.912 kb on + strand at 1387.913 kb on - strand at 1387.913 kb on - strand at 1387.954 kb on + strand, within EX28DRAFT_1372 at 1387.954 kb on + strand, within EX28DRAFT_1372 at 1387.954 kb on + strand, within EX28DRAFT_1372 at 1387.955 kb on - strand, within EX28DRAFT_1372 at 1388.093 kb on + strand, within EX28DRAFT_1372 at 1388.132 kb on - strand, within EX28DRAFT_1372 at 1388.209 kb on + strand, within EX28DRAFT_1372 at 1388.213 kb on - strand, within EX28DRAFT_1372 at 1388.213 kb on - strand, within EX28DRAFT_1372 at 1388.290 kb on + strand, within EX28DRAFT_1372 at 1388.291 kb on - strand, within EX28DRAFT_1372 at 1388.324 kb on - strand, within EX28DRAFT_1372 at 1388.520 kb on - strand, within EX28DRAFT_1372 at 1388.520 kb on - strand, within EX28DRAFT_1372 at 1388.530 kb on + strand at 1388.530 kb on + strand at 1388.928 kb on - strand, within EX28DRAFT_1373 at 1388.983 kb on + strand, within EX28DRAFT_1373 at 1388.984 kb on - strand, within EX28DRAFT_1373 at 1389.106 kb on - strand, within EX28DRAFT_1373 at 1389.223 kb on - strand, within EX28DRAFT_1373 at 1389.225 kb on - strand, within EX28DRAFT_1373 at 1389.252 kb on - strand, within EX28DRAFT_1373 at 1389.435 kb on + strand, within EX28DRAFT_1373 at 1389.436 kb on - strand, within EX28DRAFT_1373 at 1389.575 kb on + strand, within EX28DRAFT_1373
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,386,941 + EX28DRAFT_1371 0.23 -0.2 1,387,140 - EX28DRAFT_1371 0.39 +1.3 1,387,206 + EX28DRAFT_1371 0.45 -0.7 1,387,206 + EX28DRAFT_1371 0.45 +0.2 1,387,206 + EX28DRAFT_1371 0.45 -0.1 1,387,206 + EX28DRAFT_1371 0.45 -0.7 1,387,207 - EX28DRAFT_1371 0.45 -0.5 1,387,207 - EX28DRAFT_1371 0.45 +1.5 1,387,207 - EX28DRAFT_1371 0.45 -1.8 1,387,207 - EX28DRAFT_1371 0.45 -1.1 1,387,208 + EX28DRAFT_1371 0.45 -0.3 1,387,208 + EX28DRAFT_1371 0.45 -0.2 1,387,209 - EX28DRAFT_1371 0.45 -0.3 1,387,209 - EX28DRAFT_1371 0.45 +0.5 1,387,265 + EX28DRAFT_1371 0.49 +0.1 1,387,321 + EX28DRAFT_1371 0.54 +0.6 1,387,439 + EX28DRAFT_1371 0.64 +0.5 1,387,439 + EX28DRAFT_1371 0.64 -0.7 1,387,439 + EX28DRAFT_1371 0.64 -0.3 1,387,439 + EX28DRAFT_1371 0.64 -1.0 1,387,460 + EX28DRAFT_1371 0.65 -0.6 1,387,859 - -0.1 1,387,911 - -3.2 1,387,912 + +0.7 1,387,913 - +1.5 1,387,913 - -1.1 1,387,954 + EX28DRAFT_1372 0.11 +0.3 1,387,954 + EX28DRAFT_1372 0.11 -0.4 1,387,954 + EX28DRAFT_1372 0.11 +1.0 1,387,955 - EX28DRAFT_1372 0.11 +0.7 1,388,093 + EX28DRAFT_1372 0.30 +1.6 1,388,132 - EX28DRAFT_1372 0.35 +0.3 1,388,209 + EX28DRAFT_1372 0.46 -2.2 1,388,213 - EX28DRAFT_1372 0.46 +0.5 1,388,213 - EX28DRAFT_1372 0.46 -1.4 1,388,290 + EX28DRAFT_1372 0.57 -2.1 1,388,291 - EX28DRAFT_1372 0.57 +0.3 1,388,324 - EX28DRAFT_1372 0.62 +0.4 1,388,520 - EX28DRAFT_1372 0.89 +0.4 1,388,520 - EX28DRAFT_1372 0.89 +0.6 1,388,530 + -3.9 1,388,530 + -3.8 1,388,928 - EX28DRAFT_1373 0.26 -0.3 1,388,983 + EX28DRAFT_1373 0.30 -0.1 1,388,984 - EX28DRAFT_1373 0.30 -1.4 1,389,106 - EX28DRAFT_1373 0.40 -2.2 1,389,223 - EX28DRAFT_1373 0.49 +0.1 1,389,225 - EX28DRAFT_1373 0.49 +0.4 1,389,252 - EX28DRAFT_1373 0.52 -0.4 1,389,435 + EX28DRAFT_1373 0.66 +0.8 1,389,436 - EX28DRAFT_1373 0.66 -0.3 1,389,575 + EX28DRAFT_1373 0.77 -0.4
Or see this region's nucleotide sequence