Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1093 and EX28DRAFT_1094 are separated by 10 nucleotides EX28DRAFT_1094 and EX28DRAFT_1095 overlap by 4 nucleotides
EX28DRAFT_1093: EX28DRAFT_1093 - uncharacterized peroxidase-related enzyme, at 1,104,336 to 1,105,427
_1093
EX28DRAFT_1094: EX28DRAFT_1094 - putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family, at 1,105,438 to 1,106,427
_1094
EX28DRAFT_1095: EX28DRAFT_1095 - ATPase components of various ABC-type transport systems, contain duplicated ATPase, at 1,106,424 to 1,108,031
_1095
Position (kb) 1105
1106
1107 Strain fitness (log2 ratio) -1
0
1
2 at 1104.714 kb on - strand, within EX28DRAFT_1093 at 1105.207 kb on + strand, within EX28DRAFT_1093 at 1105.207 kb on + strand, within EX28DRAFT_1093 at 1105.208 kb on - strand, within EX28DRAFT_1093 at 1105.208 kb on - strand, within EX28DRAFT_1093 at 1105.208 kb on - strand, within EX28DRAFT_1093 at 1105.386 kb on - strand at 1105.427 kb on + strand at 1105.427 kb on + strand at 1105.427 kb on + strand at 1105.428 kb on - strand at 1105.428 kb on - strand at 1105.428 kb on - strand at 1105.458 kb on + strand at 1105.533 kb on + strand at 1105.534 kb on - strand at 1105.831 kb on + strand, within EX28DRAFT_1094 at 1105.832 kb on - strand, within EX28DRAFT_1094 at 1105.938 kb on + strand, within EX28DRAFT_1094 at 1106.483 kb on + strand at 1106.486 kb on - strand at 1106.604 kb on - strand, within EX28DRAFT_1095 at 1107.006 kb on - strand, within EX28DRAFT_1095 at 1107.107 kb on + strand, within EX28DRAFT_1095
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,104,714 - EX28DRAFT_1093 0.35 +0.1 1,105,207 + EX28DRAFT_1093 0.80 +0.4 1,105,207 + EX28DRAFT_1093 0.80 -0.2 1,105,208 - EX28DRAFT_1093 0.80 +0.5 1,105,208 - EX28DRAFT_1093 0.80 -0.4 1,105,208 - EX28DRAFT_1093 0.80 +0.5 1,105,386 - -0.6 1,105,427 + -0.5 1,105,427 + +0.5 1,105,427 + -0.4 1,105,428 - +0.0 1,105,428 - +1.9 1,105,428 - -0.4 1,105,458 + +0.5 1,105,533 + +0.2 1,105,534 - -0.3 1,105,831 + EX28DRAFT_1094 0.40 +0.5 1,105,832 - EX28DRAFT_1094 0.40 -0.1 1,105,938 + EX28DRAFT_1094 0.51 +0.4 1,106,483 + -0.1 1,106,486 - +0.1 1,106,604 - EX28DRAFT_1095 0.11 +0.5 1,107,006 - EX28DRAFT_1095 0.36 +0.6 1,107,107 + EX28DRAFT_1095 0.42 +0.7
Or see this region's nucleotide sequence