Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0971 and EX28DRAFT_0972 overlap by 1 nucleotides EX28DRAFT_0972 and EX28DRAFT_0973 overlap by 14 nucleotides EX28DRAFT_0973 and EX28DRAFT_0974 overlap by 4 nucleotides
EX28DRAFT_0971: EX28DRAFT_0971 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 972,905 to 973,897
_0971
EX28DRAFT_0972: EX28DRAFT_0972 - ABC-type antimicrobial peptide transport system, permease component, at 973,897 to 974,787
_0972
EX28DRAFT_0973: EX28DRAFT_0973 - ABC-type antimicrobial peptide transport system, permease component, at 974,774 to 975,739
_0973
EX28DRAFT_0974: EX28DRAFT_0974 - ABC-type oligopeptide transport system, periplasmic component, at 975,736 to 977,376
_0974
Position (kb) 974
975
976 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 974.380 kb on - strand, within EX28DRAFT_0972 at 974.690 kb on - strand, within EX28DRAFT_0972 at 974.690 kb on - strand, within EX28DRAFT_0972 at 974.718 kb on - strand at 974.771 kb on - strand at 974.781 kb on - strand at 974.798 kb on - strand at 974.845 kb on + strand at 975.993 kb on - strand, within EX28DRAFT_0974 at 976.485 kb on - strand, within EX28DRAFT_0974 at 976.492 kb on - strand, within EX28DRAFT_0974 at 976.637 kb on - strand, within EX28DRAFT_0974
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 974,380 - EX28DRAFT_0972 0.54 -2.4 974,690 - EX28DRAFT_0972 0.89 -2.1 974,690 - EX28DRAFT_0972 0.89 -1.7 974,718 - -1.8 974,771 - -2.1 974,781 - -0.9 974,798 - +0.1 974,845 + +3.0 975,993 - EX28DRAFT_0974 0.16 +0.6 976,485 - EX28DRAFT_0974 0.46 -2.3 976,492 - EX28DRAFT_0974 0.46 -0.2 976,637 - EX28DRAFT_0974 0.55 -0.4
Or see this region's nucleotide sequence