Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0844

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0842 and EX28DRAFT_0843 are separated by 2 nucleotidesEX28DRAFT_0843 and EX28DRAFT_0844 are separated by 9 nucleotidesEX28DRAFT_0844 and EX28DRAFT_0845 are separated by 13 nucleotides EX28DRAFT_0842: EX28DRAFT_0842 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 845,369 to 846,616 _0842 EX28DRAFT_0843: EX28DRAFT_0843 - nitrate ABC transporter, permease protein, at 846,619 to 847,497 _0843 EX28DRAFT_0844: EX28DRAFT_0844 - nitrate transport ATP-binding subunits C and D, at 847,507 to 848,295 _0844 EX28DRAFT_0845: EX28DRAFT_0845 - nitrite reductase [NAD(P)H], large subunit/nitrite reductase [NAD(P)H], small subunit, at 848,309 to 852,295 _0845 Position (kb) 847 848 849Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 846.619 kb on - strandat 846.929 kb on + strand, within EX28DRAFT_0843at 847.043 kb on + strand, within EX28DRAFT_0843at 847.088 kb on + strand, within EX28DRAFT_0843at 847.172 kb on + strand, within EX28DRAFT_0843at 847.479 kb on + strandat 848.234 kb on - strandat 848.426 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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846,619 - +0.9
846,929 + EX28DRAFT_0843 0.35 -0.4
847,043 + EX28DRAFT_0843 0.48 +0.2
847,088 + EX28DRAFT_0843 0.53 -1.3
847,172 + EX28DRAFT_0843 0.63 -3.8
847,479 + +0.9
848,234 - -2.8
848,426 + +1.0

Or see this region's nucleotide sequence