Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0769 and EX28DRAFT_0770 are separated by 107 nucleotides EX28DRAFT_0770 and EX28DRAFT_0771 are separated by 37 nucleotides EX28DRAFT_0771 and EX28DRAFT_0772 are separated by 208 nucleotides EX28DRAFT_0772 and EX28DRAFT_0773 are separated by 112 nucleotides
EX28DRAFT_0769: EX28DRAFT_0769 - Uncharacterized proteins, homologs of microcin C7 resistance protein MccF, at 766,896 to 767,810
_0769
EX28DRAFT_0770: EX28DRAFT_0770 - Transglycosylase SLT domain, at 767,918 to 768,529
_0770
EX28DRAFT_0771: EX28DRAFT_0771 - Predicted glycosyltransferase, at 768,567 to 769,298
_0771
EX28DRAFT_0772: EX28DRAFT_0772 - Predicted membrane protein, at 769,507 to 769,761
_0772
EX28DRAFT_0773: EX28DRAFT_0773 - TonB-dependent siderophore receptor, at 769,874 to 771,976
_0773
Position (kb) 768
769
770 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 767.836 kb on + strand at 767.837 kb on - strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.845 kb on - strand at 767.858 kb on + strand at 767.860 kb on + strand at 767.861 kb on - strand at 767.861 kb on - strand at 767.861 kb on - strand at 767.904 kb on + strand at 767.910 kb on + strand at 767.910 kb on + strand at 767.911 kb on - strand at 767.911 kb on - strand at 768.200 kb on + strand, within EX28DRAFT_0770 at 768.200 kb on + strand, within EX28DRAFT_0770 at 768.286 kb on + strand, within EX28DRAFT_0770 at 768.336 kb on - strand, within EX28DRAFT_0770 at 768.491 kb on + strand at 768.493 kb on + strand at 768.494 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.614 kb on - strand at 768.618 kb on - strand at 768.751 kb on + strand, within EX28DRAFT_0771 at 768.952 kb on + strand, within EX28DRAFT_0771 at 768.953 kb on - strand, within EX28DRAFT_0771 at 769.053 kb on + strand, within EX28DRAFT_0771 at 769.120 kb on + strand, within EX28DRAFT_0771 at 769.248 kb on + strand at 769.248 kb on + strand at 769.248 kb on + strand at 769.249 kb on - strand at 769.251 kb on + strand at 769.251 kb on + strand at 769.316 kb on + strand at 769.316 kb on + strand at 769.316 kb on + strand at 769.317 kb on - strand at 769.394 kb on + strand at 769.448 kb on + strand at 769.448 kb on + strand at 769.448 kb on + strand at 769.449 kb on - strand at 769.513 kb on - strand at 769.527 kb on + strand at 769.539 kb on + strand, within EX28DRAFT_0772 at 769.674 kb on - strand, within EX28DRAFT_0772 at 769.674 kb on - strand, within EX28DRAFT_0772 at 769.674 kb on - strand, within EX28DRAFT_0772 at 769.737 kb on - strand at 769.759 kb on + strand at 769.760 kb on - strand at 769.807 kb on + strand at 770.158 kb on + strand, within EX28DRAFT_0773 at 770.159 kb on - strand, within EX28DRAFT_0773 at 770.159 kb on - strand, within EX28DRAFT_0773 at 770.179 kb on + strand, within EX28DRAFT_0773 at 770.234 kb on + strand, within EX28DRAFT_0773 at 770.234 kb on + strand, within EX28DRAFT_0773 at 770.235 kb on - strand, within EX28DRAFT_0773 at 770.236 kb on + strand, within EX28DRAFT_0773 at 770.293 kb on + strand, within EX28DRAFT_0773
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 767,836 + +0.9 767,837 - -0.6 767,844 + +0.3 767,844 + +0.3 767,844 + +0.1 767,844 + +0.1 767,845 - -0.5 767,858 + -0.6 767,860 + -1.5 767,861 - -0.3 767,861 - -3.2 767,861 - -0.4 767,904 + -0.6 767,910 + -0.1 767,910 + -0.1 767,911 - -1.0 767,911 - +0.0 768,200 + EX28DRAFT_0770 0.46 -3.4 768,200 + EX28DRAFT_0770 0.46 +0.6 768,286 + EX28DRAFT_0770 0.60 -0.5 768,336 - EX28DRAFT_0770 0.68 -3.6 768,491 + +0.6 768,493 + +0.5 768,494 - -0.1 768,528 - +1.5 768,528 - +0.2 768,528 - +0.1 768,528 - +1.0 768,614 - +0.2 768,618 - -2.8 768,751 + EX28DRAFT_0771 0.25 -1.2 768,952 + EX28DRAFT_0771 0.53 +0.2 768,953 - EX28DRAFT_0771 0.53 -0.5 769,053 + EX28DRAFT_0771 0.66 -0.8 769,120 + EX28DRAFT_0771 0.76 -2.0 769,248 + -3.0 769,248 + +1.2 769,248 + +0.5 769,249 - -0.1 769,251 + +0.7 769,251 + -3.3 769,316 + -1.7 769,316 + -1.3 769,316 + +0.2 769,317 - +0.8 769,394 + +0.4 769,448 + +2.1 769,448 + -0.1 769,448 + +1.2 769,449 - -4.4 769,513 - +0.2 769,527 + +1.2 769,539 + EX28DRAFT_0772 0.13 +0.1 769,674 - EX28DRAFT_0772 0.65 -0.5 769,674 - EX28DRAFT_0772 0.65 -0.1 769,674 - EX28DRAFT_0772 0.65 -0.4 769,737 - +1.1 769,759 + -0.3 769,760 - +0.8 769,807 + +0.5 770,158 + EX28DRAFT_0773 0.14 -0.9 770,159 - EX28DRAFT_0773 0.14 -0.6 770,159 - EX28DRAFT_0773 0.14 +0.0 770,179 + EX28DRAFT_0773 0.15 -0.1 770,234 + EX28DRAFT_0773 0.17 +0.7 770,234 + EX28DRAFT_0773 0.17 +0.6 770,235 - EX28DRAFT_0773 0.17 -0.9 770,236 + EX28DRAFT_0773 0.17 -0.1 770,293 + EX28DRAFT_0773 0.20 -0.1
Or see this region's nucleotide sequence