Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0758 and EX28DRAFT_0759 are separated by 123 nucleotides EX28DRAFT_0759 and EX28DRAFT_0760 are separated by 47 nucleotides EX28DRAFT_0760 and EX28DRAFT_0761 are separated by 93 nucleotides EX28DRAFT_0761 and EX28DRAFT_0762 are separated by 123 nucleotides
EX28DRAFT_0758: EX28DRAFT_0758 - septum site-determining protein MinC, at 755,065 to 755,772
_0758
EX28DRAFT_0759: EX28DRAFT_0759 - Uncharacterized protein conserved in bacteria, at 755,896 to 756,171
_0759
EX28DRAFT_0760: EX28DRAFT_0760 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), at 756,219 to 756,878
_0760
EX28DRAFT_0761: EX28DRAFT_0761 - Uncharacterized conserved protein, at 756,972 to 757,412
_0761
EX28DRAFT_0762: EX28DRAFT_0762 - Disulfide bond formation protein DsbB, at 757,536 to 758,066
_0762
Position (kb) 756
757 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 755.264 kb on + strand, within EX28DRAFT_0758 at 755.267 kb on - strand, within EX28DRAFT_0758 at 755.319 kb on + strand, within EX28DRAFT_0758 at 755.550 kb on + strand, within EX28DRAFT_0758 at 755.728 kb on + strand at 755.739 kb on + strand at 755.794 kb on - strand at 755.797 kb on - strand at 755.844 kb on + strand at 755.845 kb on - strand at 755.856 kb on + strand at 755.912 kb on - strand at 755.919 kb on + strand at 755.938 kb on + strand, within EX28DRAFT_0759 at 755.944 kb on + strand, within EX28DRAFT_0759 at 755.945 kb on - strand, within EX28DRAFT_0759 at 755.988 kb on - strand, within EX28DRAFT_0759 at 756.042 kb on + strand, within EX28DRAFT_0759 at 756.043 kb on - strand, within EX28DRAFT_0759 at 756.100 kb on + strand, within EX28DRAFT_0759 at 756.100 kb on + strand, within EX28DRAFT_0759 at 756.103 kb on + strand, within EX28DRAFT_0759 at 756.107 kb on + strand, within EX28DRAFT_0759 at 756.189 kb on + strand at 756.223 kb on - strand at 756.233 kb on + strand at 756.234 kb on - strand at 756.234 kb on - strand at 756.295 kb on - strand, within EX28DRAFT_0760 at 756.354 kb on - strand, within EX28DRAFT_0760 at 756.354 kb on - strand, within EX28DRAFT_0760 at 756.354 kb on - strand, within EX28DRAFT_0760 at 756.720 kb on - strand, within EX28DRAFT_0760 at 756.741 kb on + strand, within EX28DRAFT_0760 at 756.764 kb on + strand, within EX28DRAFT_0760 at 756.765 kb on - strand, within EX28DRAFT_0760 at 756.833 kb on - strand at 757.129 kb on + strand, within EX28DRAFT_0761 at 757.130 kb on - strand, within EX28DRAFT_0761 at 757.158 kb on + strand, within EX28DRAFT_0761 at 757.158 kb on + strand, within EX28DRAFT_0761 at 757.238 kb on + strand, within EX28DRAFT_0761 at 757.238 kb on + strand, within EX28DRAFT_0761 at 757.248 kb on + strand, within EX28DRAFT_0761 at 757.331 kb on + strand, within EX28DRAFT_0761 at 757.331 kb on + strand, within EX28DRAFT_0761 at 757.537 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 755,264 + EX28DRAFT_0758 0.28 -1.5 755,267 - EX28DRAFT_0758 0.29 -0.3 755,319 + EX28DRAFT_0758 0.36 +2.1 755,550 + EX28DRAFT_0758 0.69 -0.9 755,728 + -1.5 755,739 + -1.0 755,794 - -1.0 755,797 - +0.4 755,844 + +2.5 755,845 - -0.2 755,856 + -0.6 755,912 - +2.3 755,919 + -1.8 755,938 + EX28DRAFT_0759 0.15 +0.3 755,944 + EX28DRAFT_0759 0.17 +0.2 755,945 - EX28DRAFT_0759 0.18 -0.7 755,988 - EX28DRAFT_0759 0.33 -0.5 756,042 + EX28DRAFT_0759 0.53 -2.1 756,043 - EX28DRAFT_0759 0.53 -3.9 756,100 + EX28DRAFT_0759 0.74 -1.0 756,100 + EX28DRAFT_0759 0.74 -0.1 756,103 + EX28DRAFT_0759 0.75 +0.5 756,107 + EX28DRAFT_0759 0.76 -1.7 756,189 + -1.6 756,223 - -0.6 756,233 + +0.4 756,234 - -0.5 756,234 - +0.7 756,295 - EX28DRAFT_0760 0.12 -0.1 756,354 - EX28DRAFT_0760 0.20 +0.1 756,354 - EX28DRAFT_0760 0.20 +0.2 756,354 - EX28DRAFT_0760 0.20 -0.5 756,720 - EX28DRAFT_0760 0.76 -0.2 756,741 + EX28DRAFT_0760 0.79 -1.5 756,764 + EX28DRAFT_0760 0.83 +0.8 756,765 - EX28DRAFT_0760 0.83 -1.4 756,833 - -0.3 757,129 + EX28DRAFT_0761 0.36 +0.4 757,130 - EX28DRAFT_0761 0.36 -2.2 757,158 + EX28DRAFT_0761 0.42 +0.3 757,158 + EX28DRAFT_0761 0.42 +0.5 757,238 + EX28DRAFT_0761 0.60 +0.0 757,238 + EX28DRAFT_0761 0.60 +0.9 757,248 + EX28DRAFT_0761 0.63 -1.4 757,331 + EX28DRAFT_0761 0.81 +0.6 757,331 + EX28DRAFT_0761 0.81 +0.5 757,537 + +0.5
Or see this region's nucleotide sequence