Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0745 and EX28DRAFT_0746 are separated by 184 nucleotides EX28DRAFT_0746 and EX28DRAFT_0747 are separated by 6 nucleotides
EX28DRAFT_0745: EX28DRAFT_0745 - L-serine dehydratase, iron-sulfur-dependent, single chain form, at 743,304 to 744,668
_0745
EX28DRAFT_0746: EX28DRAFT_0746 - NUDIX domain, at 744,853 to 745,431
_0746
EX28DRAFT_0747: EX28DRAFT_0747 - aminodeoxychorismate synthase, component I, bacterial clade, at 745,438 to 746,772
_0747
Position (kb) 744
745
746 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 743.934 kb on - strand, within EX28DRAFT_0745 at 744.130 kb on + strand, within EX28DRAFT_0745 at 744.238 kb on + strand, within EX28DRAFT_0745 at 744.239 kb on - strand, within EX28DRAFT_0745 at 744.242 kb on - strand, within EX28DRAFT_0745 at 744.254 kb on - strand, within EX28DRAFT_0745 at 744.274 kb on + strand, within EX28DRAFT_0745 at 744.275 kb on - strand, within EX28DRAFT_0745 at 744.432 kb on - strand, within EX28DRAFT_0745 at 744.435 kb on + strand, within EX28DRAFT_0745 at 744.450 kb on - strand, within EX28DRAFT_0745 at 744.467 kb on + strand, within EX28DRAFT_0745 at 744.471 kb on - strand, within EX28DRAFT_0745 at 744.659 kb on + strand at 744.659 kb on + strand at 744.659 kb on + strand at 744.659 kb on + strand at 744.660 kb on - strand at 744.660 kb on - strand at 744.660 kb on - strand at 744.660 kb on - strand at 744.660 kb on - strand at 744.663 kb on - strand at 744.712 kb on + strand at 744.712 kb on + strand at 744.713 kb on - strand at 744.714 kb on + strand at 744.714 kb on + strand at 744.715 kb on - strand at 744.724 kb on + strand at 744.725 kb on - strand at 744.729 kb on + strand at 744.729 kb on + strand at 744.730 kb on - strand at 744.843 kb on + strand at 744.848 kb on + strand at 744.849 kb on - strand at 744.849 kb on - strand at 744.920 kb on + strand, within EX28DRAFT_0746 at 744.921 kb on - strand, within EX28DRAFT_0746 at 745.058 kb on + strand, within EX28DRAFT_0746 at 745.077 kb on + strand, within EX28DRAFT_0746 at 745.264 kb on - strand, within EX28DRAFT_0746 at 745.268 kb on - strand, within EX28DRAFT_0746 at 745.268 kb on - strand, within EX28DRAFT_0746 at 745.378 kb on + strand at 745.378 kb on + strand at 745.470 kb on + strand at 745.488 kb on - strand at 745.611 kb on - strand, within EX28DRAFT_0747 at 746.033 kb on - strand, within EX28DRAFT_0747 at 746.041 kb on + strand, within EX28DRAFT_0747 at 746.041 kb on + strand, within EX28DRAFT_0747 at 746.043 kb on + strand, within EX28DRAFT_0747 at 746.043 kb on + strand, within EX28DRAFT_0747 at 746.085 kb on + strand, within EX28DRAFT_0747 at 746.085 kb on + strand, within EX28DRAFT_0747 at 746.132 kb on + strand, within EX28DRAFT_0747 at 746.189 kb on + strand, within EX28DRAFT_0747 at 746.190 kb on - strand, within EX28DRAFT_0747 at 746.219 kb on + strand, within EX28DRAFT_0747 at 746.220 kb on - strand, within EX28DRAFT_0747 at 746.220 kb on - strand, within EX28DRAFT_0747 at 746.382 kb on - strand, within EX28DRAFT_0747 at 746.382 kb on - strand, within EX28DRAFT_0747 at 746.382 kb on - strand, within EX28DRAFT_0747 at 746.412 kb on + strand, within EX28DRAFT_0747 at 746.412 kb on + strand, within EX28DRAFT_0747
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 743,934 - EX28DRAFT_0745 0.46 -0.2 744,130 + EX28DRAFT_0745 0.61 -0.7 744,238 + EX28DRAFT_0745 0.68 +0.6 744,239 - EX28DRAFT_0745 0.68 +0.4 744,242 - EX28DRAFT_0745 0.69 +0.7 744,254 - EX28DRAFT_0745 0.70 +0.5 744,274 + EX28DRAFT_0745 0.71 -0.9 744,275 - EX28DRAFT_0745 0.71 -0.3 744,432 - EX28DRAFT_0745 0.83 -0.1 744,435 + EX28DRAFT_0745 0.83 +0.1 744,450 - EX28DRAFT_0745 0.84 -0.1 744,467 + EX28DRAFT_0745 0.85 +1.1 744,471 - EX28DRAFT_0745 0.85 +0.1 744,659 + -1.1 744,659 + +0.0 744,659 + +0.6 744,659 + +0.6 744,660 - +0.6 744,660 - -0.3 744,660 - -2.6 744,660 - +0.7 744,660 - +0.1 744,663 - -0.2 744,712 + -1.4 744,712 + -0.2 744,713 - +0.4 744,714 + -0.6 744,714 + -1.1 744,715 - -0.3 744,724 + -0.3 744,725 - +0.3 744,729 + -0.4 744,729 + +0.3 744,730 - +0.5 744,843 + +0.8 744,848 + -2.4 744,849 - -0.1 744,849 - -0.2 744,920 + EX28DRAFT_0746 0.12 -0.3 744,921 - EX28DRAFT_0746 0.12 -0.1 745,058 + EX28DRAFT_0746 0.35 -3.7 745,077 + EX28DRAFT_0746 0.39 -2.8 745,264 - EX28DRAFT_0746 0.71 -4.3 745,268 - EX28DRAFT_0746 0.72 +0.3 745,268 - EX28DRAFT_0746 0.72 -0.3 745,378 + +1.9 745,378 + +0.0 745,470 + -0.7 745,488 - +0.7 745,611 - EX28DRAFT_0747 0.13 -1.7 746,033 - EX28DRAFT_0747 0.45 -0.7 746,041 + EX28DRAFT_0747 0.45 +0.7 746,041 + EX28DRAFT_0747 0.45 -0.2 746,043 + EX28DRAFT_0747 0.45 +0.8 746,043 + EX28DRAFT_0747 0.45 +0.4 746,085 + EX28DRAFT_0747 0.48 -1.1 746,085 + EX28DRAFT_0747 0.48 -0.1 746,132 + EX28DRAFT_0747 0.52 +1.9 746,189 + EX28DRAFT_0747 0.56 -0.1 746,190 - EX28DRAFT_0747 0.56 +1.0 746,219 + EX28DRAFT_0747 0.59 -0.0 746,220 - EX28DRAFT_0747 0.59 +1.3 746,220 - EX28DRAFT_0747 0.59 -0.2 746,382 - EX28DRAFT_0747 0.71 +0.0 746,382 - EX28DRAFT_0747 0.71 -1.5 746,382 - EX28DRAFT_0747 0.71 -0.1 746,412 + EX28DRAFT_0747 0.73 -1.8 746,412 + EX28DRAFT_0747 0.73 -0.3
Or see this region's nucleotide sequence