Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0743 and EX28DRAFT_0744 are separated by 6 nucleotides EX28DRAFT_0744 and EX28DRAFT_0745 are separated by 130 nucleotides
EX28DRAFT_0743: EX28DRAFT_0743 - Membrane protein TerC, possibly involved in tellurium resistance, at 740,009 to 741,568
_0743
EX28DRAFT_0744: EX28DRAFT_0744 - FOG: EAL domain, at 741,575 to 743,173
_0744
EX28DRAFT_0745: EX28DRAFT_0745 - L-serine dehydratase, iron-sulfur-dependent, single chain form, at 743,304 to 744,668
_0745
Position (kb) 741
742
743
744 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 740.578 kb on + strand, within EX28DRAFT_0743 at 740.579 kb on - strand, within EX28DRAFT_0743 at 740.632 kb on + strand, within EX28DRAFT_0743 at 740.633 kb on - strand, within EX28DRAFT_0743 at 740.645 kb on + strand, within EX28DRAFT_0743 at 740.713 kb on + strand, within EX28DRAFT_0743 at 740.714 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 740.870 kb on - strand, within EX28DRAFT_0743 at 741.236 kb on - strand, within EX28DRAFT_0743 at 741.566 kb on + strand at 741.682 kb on - strand at 741.704 kb on + strand at 741.724 kb on - strand at 741.800 kb on - strand, within EX28DRAFT_0744 at 742.065 kb on - strand, within EX28DRAFT_0744 at 742.065 kb on - strand, within EX28DRAFT_0744 at 742.067 kb on + strand, within EX28DRAFT_0744 at 742.067 kb on + strand, within EX28DRAFT_0744 at 742.105 kb on + strand, within EX28DRAFT_0744 at 742.106 kb on - strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.137 kb on + strand, within EX28DRAFT_0744 at 742.138 kb on - strand, within EX28DRAFT_0744 at 742.143 kb on - strand, within EX28DRAFT_0744 at 742.170 kb on + strand, within EX28DRAFT_0744 at 742.366 kb on + strand, within EX28DRAFT_0744 at 742.367 kb on - strand, within EX28DRAFT_0744 at 742.467 kb on - strand, within EX28DRAFT_0744 at 742.738 kb on + strand, within EX28DRAFT_0744 at 742.744 kb on + strand, within EX28DRAFT_0744 at 742.745 kb on - strand, within EX28DRAFT_0744 at 743.068 kb on + strand at 743.082 kb on - strand at 743.143 kb on - strand at 743.222 kb on - strand at 743.302 kb on + strand at 743.305 kb on + strand at 743.306 kb on - strand at 743.322 kb on - strand at 743.384 kb on - strand at 743.384 kb on - strand at 743.387 kb on + strand at 743.388 kb on - strand at 743.388 kb on - strand at 743.445 kb on - strand, within EX28DRAFT_0745 at 743.544 kb on - strand, within EX28DRAFT_0745 at 743.693 kb on - strand, within EX28DRAFT_0745 at 743.734 kb on + strand, within EX28DRAFT_0745 at 743.735 kb on - strand, within EX28DRAFT_0745 at 743.760 kb on - strand, within EX28DRAFT_0745 at 743.771 kb on - strand, within EX28DRAFT_0745 at 743.771 kb on - strand, within EX28DRAFT_0745 at 743.934 kb on - strand, within EX28DRAFT_0745 at 744.130 kb on + strand, within EX28DRAFT_0745
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 740,578 + EX28DRAFT_0743 0.36 +0.5 740,579 - EX28DRAFT_0743 0.37 +0.0 740,632 + EX28DRAFT_0743 0.40 -0.3 740,633 - EX28DRAFT_0743 0.40 +0.7 740,645 + EX28DRAFT_0743 0.41 -0.5 740,713 + EX28DRAFT_0743 0.45 +1.1 740,714 - EX28DRAFT_0743 0.45 -1.1 740,870 - EX28DRAFT_0743 0.55 -0.5 740,870 - EX28DRAFT_0743 0.55 -2.9 740,870 - EX28DRAFT_0743 0.55 -0.1 741,236 - EX28DRAFT_0743 0.79 +0.2 741,566 + -2.1 741,682 - +1.1 741,704 + +0.3 741,724 - +0.1 741,800 - EX28DRAFT_0744 0.14 -0.4 742,065 - EX28DRAFT_0744 0.31 +1.0 742,065 - EX28DRAFT_0744 0.31 -0.1 742,067 + EX28DRAFT_0744 0.31 -0.3 742,067 + EX28DRAFT_0744 0.31 +0.1 742,105 + EX28DRAFT_0744 0.33 -0.1 742,106 - EX28DRAFT_0744 0.33 +0.0 742,137 + EX28DRAFT_0744 0.35 -1.9 742,137 + EX28DRAFT_0744 0.35 +0.4 742,137 + EX28DRAFT_0744 0.35 -1.4 742,138 - EX28DRAFT_0744 0.35 +0.4 742,143 - EX28DRAFT_0744 0.36 -2.4 742,170 + EX28DRAFT_0744 0.37 -0.1 742,366 + EX28DRAFT_0744 0.49 -4.2 742,367 - EX28DRAFT_0744 0.50 -0.5 742,467 - EX28DRAFT_0744 0.56 +0.3 742,738 + EX28DRAFT_0744 0.73 -1.1 742,744 + EX28DRAFT_0744 0.73 -0.2 742,745 - EX28DRAFT_0744 0.73 -2.3 743,068 + -0.5 743,082 - +0.1 743,143 - -1.7 743,222 - -0.6 743,302 + -0.0 743,305 + +0.2 743,306 - -0.7 743,322 - -0.3 743,384 - +1.0 743,384 - -0.4 743,387 + +0.4 743,388 - -0.1 743,388 - +0.1 743,445 - EX28DRAFT_0745 0.10 -2.9 743,544 - EX28DRAFT_0745 0.18 +0.8 743,693 - EX28DRAFT_0745 0.28 -0.2 743,734 + EX28DRAFT_0745 0.32 -1.4 743,735 - EX28DRAFT_0745 0.32 +0.5 743,760 - EX28DRAFT_0745 0.33 -0.3 743,771 - EX28DRAFT_0745 0.34 +0.6 743,771 - EX28DRAFT_0745 0.34 -0.2 743,934 - EX28DRAFT_0745 0.46 -0.2 744,130 + EX28DRAFT_0745 0.61 -0.7
Or see this region's nucleotide sequence