Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0729 and EX28DRAFT_0730 are separated by 68 nucleotides EX28DRAFT_0730 and EX28DRAFT_0731 are separated by 161 nucleotides EX28DRAFT_0731 and EX28DRAFT_0732 are separated by 74 nucleotides EX28DRAFT_0732 and EX28DRAFT_0733 are separated by 23 nucleotides
EX28DRAFT_0729: EX28DRAFT_0729 - transcriptional regulator, IclR family, at 728,900 to 729,691
_0729
EX28DRAFT_0730: EX28DRAFT_0730 - YobH-like protein, at 729,760 to 729,999
_0730
EX28DRAFT_0731: EX28DRAFT_0731 - MgrB protein, at 730,161 to 730,304
_0731
EX28DRAFT_0732: EX28DRAFT_0732 - YebO-like protein, at 730,379 to 730,669
_0732
EX28DRAFT_0733: EX28DRAFT_0733 - Predicted Zn-dependent hydrolases of the beta-lactamase fold, at 730,693 to 731,682
_0733
Position (kb) 730
731 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 729.556 kb on - strand, within EX28DRAFT_0729 at 729.570 kb on + strand, within EX28DRAFT_0729 at 729.571 kb on - strand, within EX28DRAFT_0729 at 729.575 kb on - strand, within EX28DRAFT_0729 at 729.592 kb on - strand, within EX28DRAFT_0729 at 729.620 kb on + strand at 729.620 kb on + strand at 729.621 kb on - strand at 729.650 kb on - strand at 729.704 kb on + strand at 729.872 kb on - strand, within EX28DRAFT_0730 at 729.875 kb on + strand, within EX28DRAFT_0730 at 729.975 kb on + strand, within EX28DRAFT_0730 at 730.022 kb on + strand at 730.034 kb on - strand at 730.034 kb on - strand at 730.100 kb on - strand at 730.133 kb on + strand at 730.305 kb on + strand at 730.305 kb on + strand at 730.625 kb on - strand, within EX28DRAFT_0732 at 730.625 kb on - strand, within EX28DRAFT_0732 at 730.960 kb on - strand, within EX28DRAFT_0733 at 730.968 kb on + strand, within EX28DRAFT_0733 at 731.238 kb on + strand, within EX28DRAFT_0733 at 731.238 kb on + strand, within EX28DRAFT_0733 at 731.267 kb on + strand, within EX28DRAFT_0733 at 731.381 kb on - strand, within EX28DRAFT_0733 at 731.422 kb on - strand, within EX28DRAFT_0733 at 731.444 kb on + strand, within EX28DRAFT_0733 at 731.453 kb on - strand, within EX28DRAFT_0733 at 731.484 kb on + strand, within EX28DRAFT_0733 at 731.668 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 729,556 - EX28DRAFT_0729 0.83 -0.2 729,570 + EX28DRAFT_0729 0.85 -2.4 729,571 - EX28DRAFT_0729 0.85 +0.2 729,575 - EX28DRAFT_0729 0.85 +0.3 729,592 - EX28DRAFT_0729 0.87 +0.0 729,620 + -0.4 729,620 + -0.5 729,621 - -1.6 729,650 - -1.8 729,704 + +0.9 729,872 - EX28DRAFT_0730 0.47 -0.9 729,875 + EX28DRAFT_0730 0.48 -1.4 729,975 + EX28DRAFT_0730 0.90 -2.2 730,022 + -0.7 730,034 - -3.6 730,034 - -2.9 730,100 - -0.4 730,133 + -0.6 730,305 + -0.0 730,305 + -0.2 730,625 - EX28DRAFT_0732 0.85 -1.9 730,625 - EX28DRAFT_0732 0.85 -1.7 730,960 - EX28DRAFT_0733 0.27 -0.3 730,968 + EX28DRAFT_0733 0.28 -0.8 731,238 + EX28DRAFT_0733 0.55 -0.1 731,238 + EX28DRAFT_0733 0.55 -1.4 731,267 + EX28DRAFT_0733 0.58 -2.9 731,381 - EX28DRAFT_0733 0.69 +1.1 731,422 - EX28DRAFT_0733 0.74 -0.8 731,444 + EX28DRAFT_0733 0.76 -0.2 731,453 - EX28DRAFT_0733 0.77 -0.8 731,484 + EX28DRAFT_0733 0.80 -1.3 731,668 + -0.5
Or see this region's nucleotide sequence