Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0613 and EX28DRAFT_0614 overlap by 1 nucleotides EX28DRAFT_0614 and EX28DRAFT_0615 overlap by 8 nucleotides EX28DRAFT_0615 and EX28DRAFT_0616 overlap by 8 nucleotides
EX28DRAFT_0613: EX28DRAFT_0613 - flagellar protein export ATPase FliI, at 610,695 to 612,065
_0613
EX28DRAFT_0614: EX28DRAFT_0614 - Flagellar biosynthesis/type III secretory pathway protein, at 612,065 to 612,772
_0614
EX28DRAFT_0615: EX28DRAFT_0615 - flagellar motor switch protein FliG, at 612,765 to 613,763
_0615
EX28DRAFT_0616: EX28DRAFT_0616 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 613,756 to 615,432
_0616
Position (kb) 612
613
614 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 611.771 kb on + strand, within EX28DRAFT_0613 at 612.004 kb on - strand at 612.170 kb on + strand, within EX28DRAFT_0614 at 612.171 kb on - strand, within EX28DRAFT_0614 at 612.584 kb on - strand, within EX28DRAFT_0614 at 612.585 kb on + strand, within EX28DRAFT_0614 at 612.585 kb on + strand, within EX28DRAFT_0614 at 612.586 kb on - strand, within EX28DRAFT_0614 at 612.766 kb on + strand at 612.767 kb on - strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.772 kb on + strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 612.773 kb on - strand at 613.424 kb on + strand, within EX28DRAFT_0615 at 613.534 kb on + strand, within EX28DRAFT_0615 at 613.754 kb on + strand at 613.754 kb on + strand at 613.755 kb on - strand at 613.755 kb on - strand at 613.755 kb on - strand at 613.757 kb on + strand at 613.757 kb on + strand at 613.757 kb on + strand at 613.758 kb on - strand at 613.758 kb on - strand at 613.815 kb on + strand at 614.261 kb on + strand, within EX28DRAFT_0616 at 614.261 kb on + strand, within EX28DRAFT_0616 at 614.261 kb on + strand, within EX28DRAFT_0616 at 614.261 kb on + strand, within EX28DRAFT_0616 at 614.262 kb on - strand, within EX28DRAFT_0616 at 614.313 kb on + strand, within EX28DRAFT_0616 at 614.313 kb on + strand, within EX28DRAFT_0616 at 614.313 kb on + strand, within EX28DRAFT_0616 at 614.314 kb on - strand, within EX28DRAFT_0616 at 614.342 kb on + strand, within EX28DRAFT_0616 at 614.342 kb on + strand, within EX28DRAFT_0616 at 614.343 kb on - strand, within EX28DRAFT_0616 at 614.343 kb on - strand, within EX28DRAFT_0616 at 614.358 kb on + strand, within EX28DRAFT_0616 at 614.481 kb on + strand, within EX28DRAFT_0616 at 614.589 kb on - strand, within EX28DRAFT_0616 at 614.610 kb on + strand, within EX28DRAFT_0616 at 614.723 kb on + strand, within EX28DRAFT_0616 at 614.724 kb on - strand, within EX28DRAFT_0616 at 614.724 kb on - strand, within EX28DRAFT_0616
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 611,771 + EX28DRAFT_0613 0.78 -1.9 612,004 - -0.6 612,170 + EX28DRAFT_0614 0.15 -0.1 612,171 - EX28DRAFT_0614 0.15 +0.3 612,584 - EX28DRAFT_0614 0.73 -0.6 612,585 + EX28DRAFT_0614 0.73 -0.5 612,585 + EX28DRAFT_0614 0.73 -0.3 612,586 - EX28DRAFT_0614 0.74 -1.2 612,766 + -0.8 612,767 - -1.0 612,772 + -1.4 612,772 + +0.4 612,772 + +0.4 612,772 + +0.5 612,772 + -0.1 612,772 + -0.4 612,772 + +1.2 612,772 + -0.0 612,772 + -0.3 612,772 + -0.3 612,772 + -0.1 612,772 + -1.6 612,772 + -1.3 612,772 + +0.8 612,772 + +0.7 612,772 + -0.1 612,772 + -0.2 612,772 + -0.6 612,772 + +1.8 612,773 - +0.1 612,773 - +1.0 612,773 - +0.8 612,773 - -0.0 612,773 - +0.4 612,773 - -0.6 612,773 - -1.3 612,773 - -0.0 612,773 - -0.5 612,773 - -0.1 612,773 - -0.0 612,773 - +0.1 612,773 - -0.5 612,773 - -1.7 612,773 - +0.1 612,773 - +0.7 612,773 - -2.8 612,773 - +1.6 613,424 + EX28DRAFT_0615 0.66 -1.0 613,534 + EX28DRAFT_0615 0.77 +1.1 613,754 + +2.0 613,754 + +0.1 613,755 - +0.9 613,755 - -1.4 613,755 - -0.0 613,757 + -0.7 613,757 + -0.2 613,757 + -0.7 613,758 - -0.1 613,758 - +0.5 613,815 + +1.1 614,261 + EX28DRAFT_0616 0.30 +0.8 614,261 + EX28DRAFT_0616 0.30 -0.2 614,261 + EX28DRAFT_0616 0.30 -0.6 614,261 + EX28DRAFT_0616 0.30 -0.8 614,262 - EX28DRAFT_0616 0.30 +0.2 614,313 + EX28DRAFT_0616 0.33 -0.9 614,313 + EX28DRAFT_0616 0.33 -0.3 614,313 + EX28DRAFT_0616 0.33 -0.3 614,314 - EX28DRAFT_0616 0.33 -0.0 614,342 + EX28DRAFT_0616 0.35 +0.4 614,342 + EX28DRAFT_0616 0.35 -1.6 614,343 - EX28DRAFT_0616 0.35 +2.0 614,343 - EX28DRAFT_0616 0.35 -1.3 614,358 + EX28DRAFT_0616 0.36 -0.1 614,481 + EX28DRAFT_0616 0.43 -0.5 614,589 - EX28DRAFT_0616 0.50 +0.4 614,610 + EX28DRAFT_0616 0.51 +0.8 614,723 + EX28DRAFT_0616 0.58 -1.0 614,724 - EX28DRAFT_0616 0.58 +0.2 614,724 - EX28DRAFT_0616 0.58 -0.9
Or see this region's nucleotide sequence