Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0568 and EX28DRAFT_0569 are separated by 152 nucleotides EX28DRAFT_0569 and EX28DRAFT_0570 are separated by 141 nucleotides EX28DRAFT_0570 and EX28DRAFT_0571 are separated by 54 nucleotides EX28DRAFT_0571 and EX28DRAFT_0572 are separated by 164 nucleotides
EX28DRAFT_0568: EX28DRAFT_0568 - Transcriptional regulator, at 564,856 to 565,767
_0568
EX28DRAFT_0569: EX28DRAFT_0569 - Transcriptional regulator, at 565,920 to 566,840
_0569
EX28DRAFT_0570: EX28DRAFT_0570 - Putative translation initiation inhibitor, yjgF family, at 566,982 to 567,383
_0570
EX28DRAFT_0571: EX28DRAFT_0571 - tRNA, at 567,438 to 567,513
_0571
EX28DRAFT_0572: EX28DRAFT_0572 - TonB-dependent siderophore receptor, at 567,678 to 569,867
_0572
Position (kb) 565
566
567 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 565.057 kb on + strand, within EX28DRAFT_0568 at 565.057 kb on + strand, within EX28DRAFT_0568 at 565.058 kb on - strand, within EX28DRAFT_0568 at 565.058 kb on - strand, within EX28DRAFT_0568 at 565.274 kb on + strand, within EX28DRAFT_0568 at 565.826 kb on + strand at 565.893 kb on + strand at 565.895 kb on + strand at 565.895 kb on + strand at 565.895 kb on + strand at 565.895 kb on + strand at 565.896 kb on - strand at 565.921 kb on + strand at 565.922 kb on - strand at 566.027 kb on - strand, within EX28DRAFT_0569 at 566.062 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.105 kb on - strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.182 kb on + strand, within EX28DRAFT_0569 at 566.183 kb on - strand, within EX28DRAFT_0569 at 566.202 kb on - strand, within EX28DRAFT_0569 at 566.268 kb on + strand, within EX28DRAFT_0569 at 566.330 kb on - strand, within EX28DRAFT_0569 at 566.553 kb on + strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.554 kb on - strand, within EX28DRAFT_0569 at 566.644 kb on + strand, within EX28DRAFT_0569 at 566.645 kb on - strand, within EX28DRAFT_0569 at 566.732 kb on + strand, within EX28DRAFT_0569 at 566.759 kb on + strand at 566.759 kb on + strand at 566.759 kb on + strand at 566.760 kb on - strand at 566.760 kb on - strand at 566.876 kb on + strand at 566.939 kb on + strand at 566.939 kb on + strand at 566.940 kb on - strand at 566.975 kb on + strand at 567.027 kb on + strand, within EX28DRAFT_0570 at 567.173 kb on + strand, within EX28DRAFT_0570 at 567.202 kb on + strand, within EX28DRAFT_0570 at 567.202 kb on + strand, within EX28DRAFT_0570 at 567.203 kb on - strand, within EX28DRAFT_0570 at 567.252 kb on - strand, within EX28DRAFT_0570 at 567.292 kb on - strand, within EX28DRAFT_0570 at 567.327 kb on + strand, within EX28DRAFT_0570 at 567.639 kb on + strand at 567.695 kb on - strand at 567.727 kb on + strand at 567.727 kb on + strand at 567.728 kb on - strand at 567.732 kb on - strand at 567.800 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 565,057 + EX28DRAFT_0568 0.22 +0.2 565,057 + EX28DRAFT_0568 0.22 -3.5 565,058 - EX28DRAFT_0568 0.22 -0.3 565,058 - EX28DRAFT_0568 0.22 -0.9 565,274 + EX28DRAFT_0568 0.46 +0.2 565,826 + +0.7 565,893 + -0.9 565,895 + -0.4 565,895 + -1.5 565,895 + -0.4 565,895 + +0.1 565,896 - -0.5 565,921 + +1.4 565,922 - -0.6 566,027 - EX28DRAFT_0569 0.12 -0.4 566,062 - EX28DRAFT_0569 0.15 +0.4 566,105 - EX28DRAFT_0569 0.20 -1.9 566,105 - EX28DRAFT_0569 0.20 -3.0 566,105 - EX28DRAFT_0569 0.20 +4.0 566,105 - EX28DRAFT_0569 0.20 +1.0 566,182 + EX28DRAFT_0569 0.28 -0.4 566,182 + EX28DRAFT_0569 0.28 -0.3 566,182 + EX28DRAFT_0569 0.28 +0.3 566,183 - EX28DRAFT_0569 0.29 -0.3 566,202 - EX28DRAFT_0569 0.31 +0.4 566,268 + EX28DRAFT_0569 0.38 -0.2 566,330 - EX28DRAFT_0569 0.45 +0.3 566,553 + EX28DRAFT_0569 0.69 -1.2 566,554 - EX28DRAFT_0569 0.69 +0.0 566,554 - EX28DRAFT_0569 0.69 +0.4 566,554 - EX28DRAFT_0569 0.69 -0.4 566,644 + EX28DRAFT_0569 0.79 -0.0 566,645 - EX28DRAFT_0569 0.79 -1.0 566,732 + EX28DRAFT_0569 0.88 -0.5 566,759 + +1.8 566,759 + -0.2 566,759 + -1.5 566,760 - +0.8 566,760 - -0.3 566,876 + -1.5 566,939 + -0.3 566,939 + -3.3 566,940 - +0.1 566,975 + -0.4 567,027 + EX28DRAFT_0570 0.11 +1.2 567,173 + EX28DRAFT_0570 0.48 -0.0 567,202 + EX28DRAFT_0570 0.55 -0.2 567,202 + EX28DRAFT_0570 0.55 +1.0 567,203 - EX28DRAFT_0570 0.55 -1.5 567,252 - EX28DRAFT_0570 0.67 -0.7 567,292 - EX28DRAFT_0570 0.77 -0.0 567,327 + EX28DRAFT_0570 0.86 -0.7 567,639 + +0.4 567,695 - -0.1 567,727 + +1.8 567,727 + +1.1 567,728 - +0.7 567,732 - +0.9 567,800 - -0.1
Or see this region's nucleotide sequence