Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0540 and EX28DRAFT_0541 are separated by 45 nucleotides EX28DRAFT_0541 and EX28DRAFT_0542 are separated by 201 nucleotides EX28DRAFT_0542 and EX28DRAFT_0543 are separated by 42 nucleotides
EX28DRAFT_0540: EX28DRAFT_0540 - ATP phosphoribosyltransferase, at 534,211 to 535,110
_0540
EX28DRAFT_0541: EX28DRAFT_0541 - RNA, at 535,156 to 535,279
_0541
EX28DRAFT_0542: EX28DRAFT_0542 - Nucleoside-diphosphate-sugar epimerases, at 535,481 to 536,305
_0542
EX28DRAFT_0543: EX28DRAFT_0543 - Transcriptional regulator, at 536,348 to 537,277
_0543
Position (kb) 535
536
537 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 534.545 kb on + strand, within EX28DRAFT_0540 at 534.732 kb on + strand, within EX28DRAFT_0540 at 534.733 kb on - strand, within EX28DRAFT_0540 at 534.733 kb on - strand, within EX28DRAFT_0540 at 534.834 kb on - strand, within EX28DRAFT_0540 at 534.939 kb on + strand, within EX28DRAFT_0540 at 535.015 kb on - strand, within EX28DRAFT_0540 at 535.081 kb on - strand at 535.081 kb on - strand at 535.084 kb on + strand at 535.084 kb on + strand at 535.085 kb on - strand at 535.085 kb on - strand at 535.135 kb on + strand at 535.257 kb on - strand, within EX28DRAFT_0541 at 535.288 kb on - strand at 535.308 kb on - strand at 535.349 kb on + strand at 535.349 kb on + strand at 535.360 kb on + strand at 535.368 kb on - strand at 535.393 kb on - strand at 535.414 kb on - strand at 535.449 kb on - strand at 535.450 kb on + strand at 535.450 kb on + strand at 535.451 kb on - strand at 535.461 kb on + strand at 535.507 kb on - strand at 535.507 kb on - strand at 535.950 kb on + strand, within EX28DRAFT_0542 at 535.951 kb on - strand, within EX28DRAFT_0542 at 535.951 kb on - strand, within EX28DRAFT_0542 at 536.076 kb on + strand, within EX28DRAFT_0542 at 536.108 kb on + strand, within EX28DRAFT_0542 at 536.109 kb on - strand, within EX28DRAFT_0542 at 536.109 kb on - strand, within EX28DRAFT_0542 at 536.109 kb on - strand, within EX28DRAFT_0542 at 536.109 kb on - strand, within EX28DRAFT_0542 at 536.109 kb on - strand, within EX28DRAFT_0542 at 536.111 kb on - strand, within EX28DRAFT_0542 at 536.111 kb on - strand, within EX28DRAFT_0542 at 536.113 kb on + strand, within EX28DRAFT_0542 at 536.113 kb on + strand, within EX28DRAFT_0542 at 536.113 kb on + strand, within EX28DRAFT_0542 at 536.114 kb on - strand, within EX28DRAFT_0542 at 536.114 kb on - strand, within EX28DRAFT_0542 at 536.114 kb on - strand, within EX28DRAFT_0542 at 536.115 kb on + strand, within EX28DRAFT_0542 at 536.115 kb on + strand, within EX28DRAFT_0542 at 536.115 kb on + strand, within EX28DRAFT_0542 at 536.115 kb on + strand, within EX28DRAFT_0542 at 536.115 kb on + strand, within EX28DRAFT_0542 at 536.116 kb on - strand, within EX28DRAFT_0542 at 536.116 kb on - strand, within EX28DRAFT_0542 at 536.116 kb on - strand, within EX28DRAFT_0542 at 536.116 kb on - strand, within EX28DRAFT_0542 at 536.116 kb on - strand, within EX28DRAFT_0542 at 536.304 kb on - strand at 536.371 kb on + strand at 536.453 kb on + strand, within EX28DRAFT_0543 at 536.453 kb on + strand, within EX28DRAFT_0543 at 536.650 kb on + strand, within EX28DRAFT_0543 at 536.651 kb on - strand, within EX28DRAFT_0543 at 536.693 kb on + strand, within EX28DRAFT_0543 at 536.694 kb on - strand, within EX28DRAFT_0543 at 536.694 kb on - strand, within EX28DRAFT_0543 at 536.856 kb on + strand, within EX28DRAFT_0543 at 536.856 kb on + strand, within EX28DRAFT_0543 at 536.857 kb on - strand, within EX28DRAFT_0543 at 536.938 kb on - strand, within EX28DRAFT_0543 at 537.021 kb on - strand, within EX28DRAFT_0543 at 537.022 kb on + strand, within EX28DRAFT_0543 at 537.022 kb on + strand, within EX28DRAFT_0543 at 537.023 kb on - strand, within EX28DRAFT_0543 at 537.045 kb on + strand, within EX28DRAFT_0543 at 537.070 kb on - strand, within EX28DRAFT_0543 at 537.096 kb on + strand, within EX28DRAFT_0543 at 537.096 kb on + strand, within EX28DRAFT_0543 at 537.096 kb on + strand, within EX28DRAFT_0543 at 537.097 kb on - strand, within EX28DRAFT_0543 at 537.126 kb on + strand, within EX28DRAFT_0543 at 537.223 kb on + strand at 537.223 kb on + strand at 537.243 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 534,545 + EX28DRAFT_0540 0.37 -1.2 534,732 + EX28DRAFT_0540 0.58 -4.1 534,733 - EX28DRAFT_0540 0.58 -4.7 534,733 - EX28DRAFT_0540 0.58 +0.7 534,834 - EX28DRAFT_0540 0.69 -1.3 534,939 + EX28DRAFT_0540 0.81 +0.6 535,015 - EX28DRAFT_0540 0.89 -4.7 535,081 - +2.0 535,081 - -1.5 535,084 + -1.7 535,084 + -2.3 535,085 - -1.5 535,085 - +1.5 535,135 + -3.9 535,257 - EX28DRAFT_0541 0.81 +0.3 535,288 - -2.1 535,308 - -1.5 535,349 + -2.0 535,349 + -4.0 535,360 + -4.4 535,368 - -4.7 535,393 - +0.1 535,414 - +0.6 535,449 - -0.5 535,450 + +0.4 535,450 + -0.3 535,451 - +2.1 535,461 + +0.4 535,507 - -0.7 535,507 - -0.1 535,950 + EX28DRAFT_0542 0.57 -0.6 535,951 - EX28DRAFT_0542 0.57 +0.9 535,951 - EX28DRAFT_0542 0.57 -0.1 536,076 + EX28DRAFT_0542 0.72 +1.1 536,108 + EX28DRAFT_0542 0.76 +0.3 536,109 - EX28DRAFT_0542 0.76 +0.6 536,109 - EX28DRAFT_0542 0.76 +0.4 536,109 - EX28DRAFT_0542 0.76 -0.2 536,109 - EX28DRAFT_0542 0.76 +0.4 536,109 - EX28DRAFT_0542 0.76 +0.1 536,111 - EX28DRAFT_0542 0.76 -0.2 536,111 - EX28DRAFT_0542 0.76 +0.3 536,113 + EX28DRAFT_0542 0.77 +0.6 536,113 + EX28DRAFT_0542 0.77 -1.4 536,113 + EX28DRAFT_0542 0.77 +0.6 536,114 - EX28DRAFT_0542 0.77 +2.1 536,114 - EX28DRAFT_0542 0.77 +0.5 536,114 - EX28DRAFT_0542 0.77 +0.4 536,115 + EX28DRAFT_0542 0.77 +0.7 536,115 + EX28DRAFT_0542 0.77 -1.0 536,115 + EX28DRAFT_0542 0.77 -0.6 536,115 + EX28DRAFT_0542 0.77 +0.9 536,115 + EX28DRAFT_0542 0.77 +1.7 536,116 - EX28DRAFT_0542 0.77 +0.5 536,116 - EX28DRAFT_0542 0.77 -0.1 536,116 - EX28DRAFT_0542 0.77 +0.3 536,116 - EX28DRAFT_0542 0.77 -3.3 536,116 - EX28DRAFT_0542 0.77 -0.4 536,304 - -0.2 536,371 + +0.3 536,453 + EX28DRAFT_0543 0.11 -0.0 536,453 + EX28DRAFT_0543 0.11 -0.2 536,650 + EX28DRAFT_0543 0.32 +0.2 536,651 - EX28DRAFT_0543 0.33 +0.4 536,693 + EX28DRAFT_0543 0.37 -0.5 536,694 - EX28DRAFT_0543 0.37 -2.8 536,694 - EX28DRAFT_0543 0.37 -0.4 536,856 + EX28DRAFT_0543 0.55 -3.5 536,856 + EX28DRAFT_0543 0.55 -0.6 536,857 - EX28DRAFT_0543 0.55 +0.1 536,938 - EX28DRAFT_0543 0.63 -1.1 537,021 - EX28DRAFT_0543 0.72 +0.3 537,022 + EX28DRAFT_0543 0.72 +0.2 537,022 + EX28DRAFT_0543 0.72 +1.4 537,023 - EX28DRAFT_0543 0.73 -1.6 537,045 + EX28DRAFT_0543 0.75 -0.0 537,070 - EX28DRAFT_0543 0.78 +0.7 537,096 + EX28DRAFT_0543 0.80 +0.2 537,096 + EX28DRAFT_0543 0.80 -0.6 537,096 + EX28DRAFT_0543 0.80 +0.4 537,097 - EX28DRAFT_0543 0.81 +0.5 537,126 + EX28DRAFT_0543 0.84 -1.3 537,223 + -0.2 537,223 + -0.1 537,243 - +0.0
Or see this region's nucleotide sequence