Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0523

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0522 and EX28DRAFT_0523 overlap by 14 nucleotidesEX28DRAFT_0523 and EX28DRAFT_0524 are separated by 1 nucleotides EX28DRAFT_0522: EX28DRAFT_0522 - hypothetical protein, at 515,517 to 516,776 _0522 EX28DRAFT_0523: EX28DRAFT_0523 - Glycosyltransferase like family 2, at 516,763 to 517,737 _0523 EX28DRAFT_0524: EX28DRAFT_0524 - hypothetical protein, at 517,739 to 518,887 _0524 Position (kb) 516 517 518Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 517.235 kb on + strand, within EX28DRAFT_0523at 517.701 kb on + strandat 517.702 kb on - strandat 518.090 kb on + strand, within EX28DRAFT_0524at 518.107 kb on + strand, within EX28DRAFT_0524at 518.108 kb on - strand, within EX28DRAFT_0524at 518.113 kb on - strand, within EX28DRAFT_0524at 518.229 kb on + strand, within EX28DRAFT_0524at 518.273 kb on + strand, within EX28DRAFT_0524at 518.515 kb on + strand, within EX28DRAFT_0524at 518.572 kb on - strand, within EX28DRAFT_0524at 518.668 kb on + strand, within EX28DRAFT_0524

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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517,235 + EX28DRAFT_0523 0.48 -3.3
517,701 + -1.9
517,702 - -1.8
518,090 + EX28DRAFT_0524 0.31 -0.9
518,107 + EX28DRAFT_0524 0.32 +0.5
518,108 - EX28DRAFT_0524 0.32 -1.2
518,113 - EX28DRAFT_0524 0.33 -3.9
518,229 + EX28DRAFT_0524 0.43 +0.9
518,273 + EX28DRAFT_0524 0.46 +0.5
518,515 + EX28DRAFT_0524 0.68 +0.5
518,572 - EX28DRAFT_0524 0.72 -0.9
518,668 + EX28DRAFT_0524 0.81 +2.1

Or see this region's nucleotide sequence