Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0468 and EX28DRAFT_0469 overlap by 4 nucleotides EX28DRAFT_0469 and EX28DRAFT_0470 are separated by 42 nucleotides EX28DRAFT_0470 and EX28DRAFT_0471 overlap by 27 nucleotides
EX28DRAFT_0468: EX28DRAFT_0468 - hydroxyethylthiazole kinase, at 451,654 to 452,424
_0468
EX28DRAFT_0469: EX28DRAFT_0469 - hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 452,421 to 453,221
_0469
EX28DRAFT_0470: EX28DRAFT_0470 - Transcriptional regulators, at 453,264 to 454,010
_0470
EX28DRAFT_0471: EX28DRAFT_0471 - Sugar kinases, ribokinase family, at 453,984 to 454,937
_0471
Position (kb) 452
453
454 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 451.470 kb on - strand at 451.569 kb on + strand at 451.572 kb on + strand at 451.572 kb on + strand at 451.677 kb on - strand at 451.740 kb on - strand, within EX28DRAFT_0468 at 451.857 kb on + strand, within EX28DRAFT_0468 at 451.899 kb on - strand, within EX28DRAFT_0468 at 452.401 kb on + strand at 452.402 kb on - strand at 452.703 kb on - strand, within EX28DRAFT_0469 at 452.806 kb on + strand, within EX28DRAFT_0469 at 453.008 kb on - strand, within EX28DRAFT_0469 at 453.705 kb on + strand, within EX28DRAFT_0470 at 453.798 kb on + strand, within EX28DRAFT_0470 at 453.799 kb on - strand, within EX28DRAFT_0470 at 453.884 kb on + strand, within EX28DRAFT_0470 at 453.884 kb on + strand, within EX28DRAFT_0470 at 453.885 kb on - strand, within EX28DRAFT_0470 at 453.969 kb on + strand at 453.970 kb on - strand at 453.986 kb on - strand at 453.988 kb on - strand at 454.008 kb on + strand at 454.008 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 451,470 - -0.1 451,569 + -0.7 451,572 + +0.5 451,572 + +0.4 451,677 - +0.3 451,740 - EX28DRAFT_0468 0.11 -0.2 451,857 + EX28DRAFT_0468 0.26 +2.0 451,899 - EX28DRAFT_0468 0.32 +0.2 452,401 + +0.2 452,402 - -0.4 452,703 - EX28DRAFT_0469 0.35 -1.2 452,806 + EX28DRAFT_0469 0.48 -4.3 453,008 - EX28DRAFT_0469 0.73 -2.1 453,705 + EX28DRAFT_0470 0.59 +0.2 453,798 + EX28DRAFT_0470 0.71 +0.9 453,799 - EX28DRAFT_0470 0.72 +1.4 453,884 + EX28DRAFT_0470 0.83 +0.7 453,884 + EX28DRAFT_0470 0.83 +0.2 453,885 - EX28DRAFT_0470 0.83 +0.3 453,969 + +0.1 453,970 - +1.2 453,986 - -0.9 453,988 - +0.5 454,008 + -0.5 454,008 + -0.2
Or see this region's nucleotide sequence