Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0351 and EX28DRAFT_0352 are separated by 105 nucleotides EX28DRAFT_0352 and EX28DRAFT_0353 overlap by 1 nucleotides
EX28DRAFT_0351: EX28DRAFT_0351 - Glycerophosphoryl diester phosphodiesterase, at 315,250 to 316,308
_0351
EX28DRAFT_0352: EX28DRAFT_0352 - Ferredoxin, at 316,414 to 316,668
_0352
EX28DRAFT_0353: EX28DRAFT_0353 - Ribonucleotide reductase, beta subunit, at 316,668 to 317,798
_0353
Position (kb) 316
317 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 315.472 kb on + strand, within EX28DRAFT_0351 at 315.473 kb on - strand, within EX28DRAFT_0351 at 315.670 kb on - strand, within EX28DRAFT_0351 at 315.943 kb on + strand, within EX28DRAFT_0351 at 315.998 kb on - strand, within EX28DRAFT_0351 at 316.004 kb on - strand, within EX28DRAFT_0351 at 316.199 kb on - strand, within EX28DRAFT_0351 at 316.222 kb on + strand at 316.222 kb on + strand at 316.235 kb on - strand at 316.237 kb on - strand at 316.278 kb on + strand at 316.312 kb on + strand at 316.312 kb on + strand at 316.313 kb on - strand at 316.378 kb on - strand at 316.548 kb on - strand, within EX28DRAFT_0352 at 316.566 kb on - strand, within EX28DRAFT_0352 at 316.566 kb on - strand, within EX28DRAFT_0352 at 316.570 kb on + strand, within EX28DRAFT_0352 at 316.570 kb on + strand, within EX28DRAFT_0352 at 316.571 kb on - strand, within EX28DRAFT_0352 at 316.571 kb on - strand, within EX28DRAFT_0352 at 316.576 kb on + strand, within EX28DRAFT_0352 at 316.577 kb on - strand, within EX28DRAFT_0352
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 315,472 + EX28DRAFT_0351 0.21 +0.5 315,473 - EX28DRAFT_0351 0.21 -0.1 315,670 - EX28DRAFT_0351 0.40 +0.2 315,943 + EX28DRAFT_0351 0.65 -1.2 315,998 - EX28DRAFT_0351 0.71 -0.1 316,004 - EX28DRAFT_0351 0.71 +0.0 316,199 - EX28DRAFT_0351 0.90 -0.1 316,222 + +0.7 316,222 + -1.0 316,235 - +0.3 316,237 - +0.5 316,278 + +0.5 316,312 + +0.4 316,312 + +0.2 316,313 - +0.9 316,378 - -3.4 316,548 - EX28DRAFT_0352 0.53 +1.0 316,566 - EX28DRAFT_0352 0.60 -1.1 316,566 - EX28DRAFT_0352 0.60 -2.9 316,570 + EX28DRAFT_0352 0.61 -0.5 316,570 + EX28DRAFT_0352 0.61 +0.1 316,571 - EX28DRAFT_0352 0.62 -1.1 316,571 - EX28DRAFT_0352 0.62 -0.8 316,576 + EX28DRAFT_0352 0.64 -0.5 316,577 - EX28DRAFT_0352 0.64 +0.0
Or see this region's nucleotide sequence