Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0334 and EX28DRAFT_0335 are separated by 92 nucleotides EX28DRAFT_0335 and EX28DRAFT_0336 are separated by 64 nucleotides
EX28DRAFT_0334: EX28DRAFT_0334 - proton-translocating NADH-quinone oxidoreductase, chain N, at 296,101 to 297,558
_0334
EX28DRAFT_0335: EX28DRAFT_0335 - Chemotaxis signal transduction protein, at 297,651 to 298,655
_0335
EX28DRAFT_0336: EX28DRAFT_0336 - ribonuclease Z, at 298,720 to 299,637
_0336
Position (kb) 297
298
299 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 297.504 kb on + strand at 297.508 kb on + strand at 297.652 kb on + strand at 297.652 kb on + strand at 297.653 kb on - strand at 298.007 kb on + strand, within EX28DRAFT_0335 at 298.007 kb on + strand, within EX28DRAFT_0335 at 298.171 kb on + strand, within EX28DRAFT_0335 at 298.172 kb on - strand, within EX28DRAFT_0335 at 298.172 kb on - strand, within EX28DRAFT_0335 at 298.252 kb on + strand, within EX28DRAFT_0335 at 298.252 kb on + strand, within EX28DRAFT_0335 at 298.253 kb on - strand, within EX28DRAFT_0335 at 298.395 kb on - strand, within EX28DRAFT_0335 at 298.523 kb on + strand, within EX28DRAFT_0335 at 298.635 kb on - strand at 298.635 kb on - strand at 298.649 kb on + strand at 298.658 kb on + strand at 298.722 kb on - strand at 298.722 kb on - strand at 299.048 kb on + strand, within EX28DRAFT_0336 at 299.175 kb on + strand, within EX28DRAFT_0336 at 299.201 kb on + strand, within EX28DRAFT_0336 at 299.323 kb on + strand, within EX28DRAFT_0336 at 299.329 kb on - strand, within EX28DRAFT_0336 at 299.560 kb on - strand at 299.617 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 297,504 + -1.3 297,508 + -0.2 297,652 + -1.2 297,652 + -0.5 297,653 - +0.5 298,007 + EX28DRAFT_0335 0.35 -1.6 298,007 + EX28DRAFT_0335 0.35 +0.1 298,171 + EX28DRAFT_0335 0.52 -1.8 298,172 - EX28DRAFT_0335 0.52 -0.0 298,172 - EX28DRAFT_0335 0.52 -4.1 298,252 + EX28DRAFT_0335 0.60 +0.2 298,252 + EX28DRAFT_0335 0.60 -0.3 298,253 - EX28DRAFT_0335 0.60 -2.6 298,395 - EX28DRAFT_0335 0.74 +0.2 298,523 + EX28DRAFT_0335 0.87 -0.5 298,635 - -0.3 298,635 - -0.1 298,649 + -0.2 298,658 + +0.4 298,722 - +1.4 298,722 - +0.1 299,048 + EX28DRAFT_0336 0.36 -0.5 299,175 + EX28DRAFT_0336 0.50 -0.7 299,201 + EX28DRAFT_0336 0.52 +1.0 299,323 + EX28DRAFT_0336 0.66 -0.1 299,329 - EX28DRAFT_0336 0.66 -0.6 299,560 - -1.5 299,617 - -1.6
Or see this region's nucleotide sequence