Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0323 and EX28DRAFT_0324 are separated by 2 nucleotides EX28DRAFT_0324 and EX28DRAFT_0325 overlap by 4 nucleotides EX28DRAFT_0325 and EX28DRAFT_0326 are separated by 6 nucleotides EX28DRAFT_0326 and EX28DRAFT_0327 are separated by 7 nucleotides
EX28DRAFT_0323: EX28DRAFT_0323 - NADH (or F420H2) dehydrogenase, subunit C, at 283,838 to 285,640
_0323
EX28DRAFT_0324: EX28DRAFT_0324 - NADH-quinone oxidoreductase, E subunit, at 285,643 to 286,143
_0324
EX28DRAFT_0325: EX28DRAFT_0325 - NADH-quinone oxidoreductase, F subunit, at 286,140 to 287,477
_0325
EX28DRAFT_0326: EX28DRAFT_0326 - RNA, at 287,484 to 287,525
_0326
EX28DRAFT_0327: EX28DRAFT_0327 - NADH-quinone oxidoreductase, chain G, at 287,533 to 290,256
_0327
Position (kb) 286
287
288 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 285.228 kb on - strand, within EX28DRAFT_0323 at 285.228 kb on - strand, within EX28DRAFT_0323 at 285.464 kb on - strand at 285.467 kb on - strand at 285.605 kb on - strand at 285.619 kb on + strand at 285.809 kb on - strand, within EX28DRAFT_0324 at 285.868 kb on + strand, within EX28DRAFT_0324 at 286.047 kb on + strand, within EX28DRAFT_0324 at 286.047 kb on + strand, within EX28DRAFT_0324 at 286.671 kb on + strand, within EX28DRAFT_0325 at 286.672 kb on - strand, within EX28DRAFT_0325 at 286.700 kb on + strand, within EX28DRAFT_0325 at 287.084 kb on + strand, within EX28DRAFT_0325 at 287.312 kb on - strand, within EX28DRAFT_0325 at 287.427 kb on - strand at 287.462 kb on + strand at 287.563 kb on + strand at 288.014 kb on - strand, within EX28DRAFT_0327 at 288.022 kb on + strand, within EX28DRAFT_0327 at 288.047 kb on + strand, within EX28DRAFT_0327 at 288.047 kb on + strand, within EX28DRAFT_0327 at 288.347 kb on - strand, within EX28DRAFT_0327
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 285,228 - EX28DRAFT_0323 0.77 +0.7 285,228 - EX28DRAFT_0323 0.77 -2.9 285,464 - -1.2 285,467 - -0.1 285,605 - -2.0 285,619 + -0.9 285,809 - EX28DRAFT_0324 0.33 -0.3 285,868 + EX28DRAFT_0324 0.45 -0.6 286,047 + EX28DRAFT_0324 0.81 -1.1 286,047 + EX28DRAFT_0324 0.81 -2.9 286,671 + EX28DRAFT_0325 0.40 -0.7 286,672 - EX28DRAFT_0325 0.40 -4.5 286,700 + EX28DRAFT_0325 0.42 -3.0 287,084 + EX28DRAFT_0325 0.71 -1.1 287,312 - EX28DRAFT_0325 0.88 -3.3 287,427 - -1.0 287,462 + -3.5 287,563 + -3.4 288,014 - EX28DRAFT_0327 0.18 -0.4 288,022 + EX28DRAFT_0327 0.18 -2.2 288,047 + EX28DRAFT_0327 0.19 -6.0 288,047 + EX28DRAFT_0327 0.19 -3.3 288,347 - EX28DRAFT_0327 0.30 -2.0
Or see this region's nucleotide sequence