Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0117 and EX28DRAFT_0118 are separated by 78 nucleotides EX28DRAFT_0118 and EX28DRAFT_0119 are separated by 17 nucleotides EX28DRAFT_0119 and EX28DRAFT_0120 overlap by 1 nucleotides
EX28DRAFT_0117: EX28DRAFT_0117 - Leucyl aminopeptidase, at 54,495 to 55,781
_0117
EX28DRAFT_0118: EX28DRAFT_0118 - SseB protein C-terminal domain/SseB protein N-terminal domain, at 55,860 to 56,636
_0118
EX28DRAFT_0119: EX28DRAFT_0119 - transcriptional regulator, RpiR family, at 56,654 to 57,424
_0119
EX28DRAFT_0120: EX28DRAFT_0120 - Rhodanese-related sulfurtransferase, at 57,424 to 58,272
_0120
Position (kb) 55
56
57 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 54.964 kb on - strand, within EX28DRAFT_0117 at 54.964 kb on - strand, within EX28DRAFT_0117 at 55.058 kb on - strand, within EX28DRAFT_0117 at 55.224 kb on + strand, within EX28DRAFT_0117 at 55.224 kb on + strand, within EX28DRAFT_0117 at 55.225 kb on - strand, within EX28DRAFT_0117 at 55.225 kb on - strand, within EX28DRAFT_0117 at 55.656 kb on + strand at 55.780 kb on - strand at 55.859 kb on + strand at 55.882 kb on + strand at 56.201 kb on + strand, within EX28DRAFT_0118 at 56.388 kb on - strand, within EX28DRAFT_0118 at 56.513 kb on + strand, within EX28DRAFT_0118 at 56.555 kb on + strand, within EX28DRAFT_0118 at 56.858 kb on - strand, within EX28DRAFT_0119 at 56.935 kb on + strand, within EX28DRAFT_0119 at 56.962 kb on + strand, within EX28DRAFT_0119 at 57.120 kb on + strand, within EX28DRAFT_0119 at 57.120 kb on + strand, within EX28DRAFT_0119 at 57.120 kb on + strand, within EX28DRAFT_0119 at 57.121 kb on - strand, within EX28DRAFT_0119 at 57.121 kb on - strand, within EX28DRAFT_0119 at 57.367 kb on - strand at 57.367 kb on - strand at 57.425 kb on + strand at 57.580 kb on + strand, within EX28DRAFT_0120 at 57.581 kb on - strand, within EX28DRAFT_0120 at 57.581 kb on - strand, within EX28DRAFT_0120
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 54,964 - EX28DRAFT_0117 0.36 -4.9 54,964 - EX28DRAFT_0117 0.36 +1.1 55,058 - EX28DRAFT_0117 0.44 -0.3 55,224 + EX28DRAFT_0117 0.57 -0.2 55,224 + EX28DRAFT_0117 0.57 -0.4 55,225 - EX28DRAFT_0117 0.57 -2.2 55,225 - EX28DRAFT_0117 0.57 -0.9 55,656 + -1.1 55,780 - -0.9 55,859 + -1.1 55,882 + -0.7 56,201 + EX28DRAFT_0118 0.44 -3.4 56,388 - EX28DRAFT_0118 0.68 -2.2 56,513 + EX28DRAFT_0118 0.84 -1.6 56,555 + EX28DRAFT_0118 0.89 -1.3 56,858 - EX28DRAFT_0119 0.26 +0.3 56,935 + EX28DRAFT_0119 0.36 -0.8 56,962 + EX28DRAFT_0119 0.40 +0.1 57,120 + EX28DRAFT_0119 0.60 -1.3 57,120 + EX28DRAFT_0119 0.60 -1.5 57,120 + EX28DRAFT_0119 0.60 +0.8 57,121 - EX28DRAFT_0119 0.61 -1.3 57,121 - EX28DRAFT_0119 0.61 +0.2 57,367 - -0.2 57,367 - +0.3 57,425 + -0.2 57,580 + EX28DRAFT_0120 0.18 -0.5 57,581 - EX28DRAFT_0120 0.18 -0.1 57,581 - EX28DRAFT_0120 0.18 -0.5
Or see this region's nucleotide sequence