Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20920 and CA264_20925 are separated by 381 nucleotides CA264_20925 and CA264_20930 overlap by 1 nucleotides CA264_20930 and CA264_20935 are separated by 9 nucleotides
CA264_20920: CA264_20920 - hypothetical protein, at 49,259 to 50,200
_20920
CA264_20925: CA264_20925 - hypothetical protein, at 50,582 to 50,791
_20925
CA264_20930: CA264_20930 - hypothetical protein, at 50,791 to 51,402
_20930
CA264_20935: CA264_20935 - transcriptional regulator, at 51,412 to 51,783
_20935
Position (kb) 50
51 Strain fitness (log2 ratio) -1
0
1
2 at 49.645 kb on + strand, within CA264_20920 at 49.646 kb on - strand, within CA264_20920 at 49.676 kb on - strand, within CA264_20920 at 49.699 kb on + strand, within CA264_20920 at 49.713 kb on + strand, within CA264_20920 at 49.716 kb on + strand, within CA264_20920 at 49.790 kb on + strand, within CA264_20920 at 49.791 kb on - strand, within CA264_20920 at 49.794 kb on - strand, within CA264_20920 at 49.815 kb on + strand, within CA264_20920 at 49.956 kb on + strand, within CA264_20920 at 49.956 kb on + strand, within CA264_20920 at 49.956 kb on + strand, within CA264_20920 at 49.956 kb on - strand, within CA264_20920 at 49.957 kb on - strand, within CA264_20920 at 49.961 kb on + strand, within CA264_20920 at 49.966 kb on + strand, within CA264_20920 at 49.966 kb on + strand, within CA264_20920 at 50.089 kb on + strand, within CA264_20920 at 50.105 kb on + strand, within CA264_20920 at 50.105 kb on + strand, within CA264_20920 at 50.105 kb on + strand, within CA264_20920 at 50.105 kb on + strand, within CA264_20920 at 50.125 kb on + strand at 50.138 kb on + strand at 50.139 kb on - strand at 50.139 kb on - strand at 50.139 kb on - strand at 50.141 kb on - strand at 50.188 kb on + strand at 50.189 kb on - strand at 50.189 kb on - strand at 50.199 kb on - strand at 50.199 kb on - strand at 50.264 kb on - strand at 50.330 kb on + strand at 50.367 kb on - strand at 50.425 kb on + strand at 50.426 kb on - strand at 50.426 kb on - strand at 50.427 kb on + strand at 50.435 kb on + strand at 50.489 kb on + strand at 50.490 kb on - strand at 50.761 kb on + strand, within CA264_20925 at 50.761 kb on + strand, within CA264_20925 at 50.762 kb on - strand, within CA264_20925 at 50.786 kb on - strand at 50.802 kb on + strand at 50.809 kb on + strand at 50.880 kb on - strand, within CA264_20930 at 50.904 kb on + strand, within CA264_20930 at 50.906 kb on + strand, within CA264_20930 at 51.151 kb on - strand, within CA264_20930 at 51.255 kb on - strand, within CA264_20930 at 51.429 kb on + strand at 51.439 kb on - strand at 51.488 kb on + strand, within CA264_20935 at 51.633 kb on - strand, within CA264_20935 at 51.763 kb on - strand at 51.791 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 49,645 + CA264_20920 0.41 -0.1 49,646 - CA264_20920 0.41 -0.6 49,676 - CA264_20920 0.44 +0.1 49,699 + CA264_20920 0.47 +0.8 49,713 + CA264_20920 0.48 -0.2 49,716 + CA264_20920 0.49 +0.9 49,790 + CA264_20920 0.56 -0.2 49,791 - CA264_20920 0.56 -0.8 49,794 - CA264_20920 0.57 +1.1 49,815 + CA264_20920 0.59 +0.6 49,956 + CA264_20920 0.74 +0.4 49,956 + CA264_20920 0.74 -0.1 49,956 + CA264_20920 0.74 -0.3 49,956 - CA264_20920 0.74 +0.4 49,957 - CA264_20920 0.74 +0.1 49,961 + CA264_20920 0.75 +2.6 49,966 + CA264_20920 0.75 -0.1 49,966 + CA264_20920 0.75 -0.5 50,089 + CA264_20920 0.88 +0.0 50,105 + CA264_20920 0.90 +0.4 50,105 + CA264_20920 0.90 +0.7 50,105 + CA264_20920 0.90 +0.4 50,105 + CA264_20920 0.90 +0.3 50,125 + -0.6 50,138 + +0.8 50,139 - -0.3 50,139 - +0.6 50,139 - +0.2 50,141 - +0.5 50,188 + -0.6 50,189 - -0.7 50,189 - -1.3 50,199 - +0.6 50,199 - -0.2 50,264 - -0.4 50,330 + -0.4 50,367 - -0.4 50,425 + -0.5 50,426 - +0.0 50,426 - -0.4 50,427 + +0.5 50,435 + +0.1 50,489 + +0.0 50,490 - -1.0 50,761 + CA264_20925 0.85 +0.7 50,761 + CA264_20925 0.85 -0.8 50,762 - CA264_20925 0.86 +1.1 50,786 - +0.4 50,802 + +0.3 50,809 + -0.1 50,880 - CA264_20930 0.15 +0.1 50,904 + CA264_20930 0.18 -0.7 50,906 + CA264_20930 0.19 -0.7 51,151 - CA264_20930 0.59 -0.1 51,255 - CA264_20930 0.76 +0.6 51,429 + -0.4 51,439 - +1.1 51,488 + CA264_20935 0.20 -0.2 51,633 - CA264_20935 0.59 -1.3 51,763 - +0.2 51,791 - -0.5
Or see this region's nucleotide sequence