Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20030 and CA264_20035 are separated by 99 nucleotides CA264_20035 and CA264_20040 are separated by 0 nucleotides CA264_20040 and CA264_20045 are separated by 7 nucleotides CA264_20045 and CA264_20050 overlap by 17 nucleotides
CA264_20030: CA264_20030 - GNAT family N-acetyltransferase, at 4,618,378 to 4,619,247
_20030
CA264_20035: CA264_20035 - QacE family quaternary ammonium compound efflux SMR transporter, at 4,619,347 to 4,619,679
_20035
CA264_20040: CA264_20040 - hypothetical protein, at 4,619,680 to 4,620,483
_20040
CA264_20045: CA264_20045 - UDP-2,3-diacylglucosamine hydrolase, at 4,620,491 to 4,621,261
_20045
CA264_20050: CA264_20050 - hypothetical protein, at 4,621,245 to 4,621,898
_20050
Position (kb)
4619
4620
4621 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4618.683 kb on + strand, within CA264_20030 at 4618.683 kb on + strand, within CA264_20030 at 4618.683 kb on + strand, within CA264_20030 at 4618.683 kb on + strand, within CA264_20030 at 4618.683 kb on + strand, within CA264_20030 at 4618.684 kb on - strand, within CA264_20030 at 4618.736 kb on + strand, within CA264_20030 at 4618.737 kb on - strand, within CA264_20030 at 4618.758 kb on + strand, within CA264_20030 at 4618.766 kb on - strand, within CA264_20030 at 4618.890 kb on - strand, within CA264_20030 at 4619.028 kb on + strand, within CA264_20030 at 4619.029 kb on - strand, within CA264_20030 at 4619.029 kb on - strand, within CA264_20030 at 4619.172 kb on + strand at 4619.173 kb on - strand at 4619.173 kb on - strand at 4619.221 kb on + strand at 4619.245 kb on + strand at 4619.306 kb on + strand at 4619.306 kb on + strand at 4619.328 kb on + strand at 4619.328 kb on + strand at 4619.328 kb on + strand at 4619.329 kb on - strand at 4619.329 kb on - strand at 4619.342 kb on - strand at 4619.342 kb on - strand at 4619.344 kb on - strand at 4619.346 kb on + strand at 4619.347 kb on - strand at 4619.365 kb on + strand at 4619.682 kb on - strand at 4619.756 kb on + strand at 4619.834 kb on - strand, within CA264_20040 at 4619.840 kb on + strand, within CA264_20040 at 4619.840 kb on + strand, within CA264_20040 at 4619.840 kb on + strand, within CA264_20040 at 4619.900 kb on + strand, within CA264_20040 at 4619.967 kb on - strand, within CA264_20040 at 4620.219 kb on - strand, within CA264_20040 at 4620.262 kb on + strand, within CA264_20040 at 4620.263 kb on - strand, within CA264_20040 at 4620.288 kb on - strand, within CA264_20040 at 4620.350 kb on + strand, within CA264_20040 at 4620.350 kb on + strand, within CA264_20040 at 4620.351 kb on - strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.352 kb on + strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.353 kb on - strand, within CA264_20040 at 4620.393 kb on + strand, within CA264_20040 at 4620.402 kb on + strand, within CA264_20040 at 4620.402 kb on + strand, within CA264_20040 at 4620.402 kb on + strand, within CA264_20040 at 4620.403 kb on - strand at 4620.473 kb on - strand at 4620.473 kb on - strand at 4620.482 kb on - strand at 4620.482 kb on - strand at 4620.483 kb on + strand at 4620.484 kb on - strand at 4621.305 kb on + strand at 4621.381 kb on + strand, within CA264_20050 at 4621.381 kb on + strand, within CA264_20050 at 4621.382 kb on - strand, within CA264_20050 at 4621.382 kb on - strand, within CA264_20050
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,618,683 + CA264_20030 0.35 +0.9 4,618,683 + CA264_20030 0.35 -1.2 4,618,683 + CA264_20030 0.35 -0.5 4,618,683 + CA264_20030 0.35 +0.1 4,618,683 + CA264_20030 0.35 -0.4 4,618,684 - CA264_20030 0.35 +0.3 4,618,736 + CA264_20030 0.41 -0.6 4,618,737 - CA264_20030 0.41 +0.2 4,618,758 + CA264_20030 0.44 -1.8 4,618,766 - CA264_20030 0.45 -1.0 4,618,890 - CA264_20030 0.59 +1.5 4,619,028 + CA264_20030 0.75 +0.6 4,619,029 - CA264_20030 0.75 +0.4 4,619,029 - CA264_20030 0.75 +0.1 4,619,172 + -0.8 4,619,173 - -0.7 4,619,173 - -0.5 4,619,221 + -0.6 4,619,245 + -0.9 4,619,306 + -0.6 4,619,306 + +0.2 4,619,328 + -0.8 4,619,328 + -1.0 4,619,328 + -0.5 4,619,329 - -0.1 4,619,329 - +0.8 4,619,342 - -0.0 4,619,342 - +0.2 4,619,344 - -0.5 4,619,346 + -0.6 4,619,347 - +0.7 4,619,365 + -1.4 4,619,682 - -0.1 4,619,756 + -0.9 4,619,834 - CA264_20040 0.19 +0.1 4,619,840 + CA264_20040 0.20 -1.2 4,619,840 + CA264_20040 0.20 -0.4 4,619,840 + CA264_20040 0.20 -0.5 4,619,900 + CA264_20040 0.27 -2.0 4,619,967 - CA264_20040 0.36 -0.5 4,620,219 - CA264_20040 0.67 -2.4 4,620,262 + CA264_20040 0.72 -1.6 4,620,263 - CA264_20040 0.73 +0.9 4,620,288 - CA264_20040 0.76 -1.0 4,620,350 + CA264_20040 0.83 -2.7 4,620,350 + CA264_20040 0.83 +0.5 4,620,351 - CA264_20040 0.83 +0.8 4,620,352 + CA264_20040 0.84 +1.2 4,620,352 + CA264_20040 0.84 -1.8 4,620,352 + CA264_20040 0.84 -2.8 4,620,352 + CA264_20040 0.84 -2.2 4,620,352 + CA264_20040 0.84 -0.1 4,620,353 - CA264_20040 0.84 +1.2 4,620,353 - CA264_20040 0.84 +0.5 4,620,353 - CA264_20040 0.84 +1.0 4,620,353 - CA264_20040 0.84 +0.9 4,620,353 - CA264_20040 0.84 +0.3 4,620,353 - CA264_20040 0.84 -0.6 4,620,393 + CA264_20040 0.89 -3.8 4,620,402 + CA264_20040 0.90 -0.8 4,620,402 + CA264_20040 0.90 -0.5 4,620,402 + CA264_20040 0.90 -1.8 4,620,403 - +0.6 4,620,473 - -0.4 4,620,473 - -0.3 4,620,482 - +0.2 4,620,482 - -0.1 4,620,483 + +1.5 4,620,484 - -1.0 4,621,305 + +0.3 4,621,381 + CA264_20050 0.21 -0.8 4,621,381 + CA264_20050 0.21 -1.1 4,621,382 - CA264_20050 0.21 +0.2 4,621,382 - CA264_20050 0.21 +0.0
Or see this region's nucleotide sequence