Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18320 and CA264_18325 are separated by 52 nucleotides CA264_18325 and CA264_18330 are separated by 169 nucleotides CA264_18330 and CA264_18335 are separated by 160 nucleotides
CA264_18320: CA264_18320 - 2,5-didehydrogluconate reductase, at 4,259,999 to 4,260,817
_18320
CA264_18325: CA264_18325 - MarR family transcriptional regulator, at 4,260,870 to 4,261,319
_18325
CA264_18330: CA264_18330 - hypothetical protein, at 4,261,489 to 4,261,938
_18330
CA264_18335: CA264_18335 - peptidase M16, at 4,262,099 to 4,263,358
_18335
Position (kb)
4261
4262 Strain fitness (log2 ratio)
-1
0
1
2 at 4260.599 kb on + strand, within CA264_18320 at 4260.678 kb on + strand, within CA264_18320 at 4260.678 kb on + strand, within CA264_18320 at 4260.678 kb on + strand, within CA264_18320 at 4260.691 kb on + strand, within CA264_18320 at 4260.696 kb on - strand, within CA264_18320 at 4260.728 kb on + strand, within CA264_18320 at 4260.728 kb on + strand, within CA264_18320 at 4260.739 kb on - strand at 4261.299 kb on + strand at 4261.312 kb on - strand at 4261.334 kb on - strand at 4261.399 kb on - strand at 4261.399 kb on - strand at 4261.399 kb on - strand at 4261.402 kb on + strand at 4261.403 kb on - strand at 4261.404 kb on + strand at 4261.422 kb on - strand at 4261.467 kb on + strand at 4261.574 kb on - strand, within CA264_18330 at 4261.603 kb on + strand, within CA264_18330 at 4261.603 kb on + strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.661 kb on - strand, within CA264_18330 at 4261.694 kb on + strand, within CA264_18330 at 4261.739 kb on + strand, within CA264_18330 at 4261.772 kb on + strand, within CA264_18330 at 4261.853 kb on - strand, within CA264_18330 at 4261.953 kb on - strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.031 kb on + strand at 4262.080 kb on + strand at 4262.080 kb on + strand at 4262.081 kb on - strand at 4262.081 kb on - strand at 4262.136 kb on + strand at 4262.265 kb on + strand, within CA264_18335 at 4262.468 kb on + strand, within CA264_18335 at 4262.468 kb on + strand, within CA264_18335 at 4262.469 kb on - strand, within CA264_18335 at 4262.532 kb on + strand, within CA264_18335 at 4262.561 kb on + strand, within CA264_18335 at 4262.620 kb on - strand, within CA264_18335 at 4262.628 kb on + strand, within CA264_18335 at 4262.628 kb on + strand, within CA264_18335 at 4262.629 kb on - strand, within CA264_18335 at 4262.629 kb on - strand, within CA264_18335 at 4262.657 kb on + strand, within CA264_18335 at 4262.657 kb on + strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.799 kb on - strand, within CA264_18335 at 4262.817 kb on + strand, within CA264_18335 at 4262.818 kb on - strand, within CA264_18335 at 4262.867 kb on - strand, within CA264_18335 at 4262.902 kb on - strand, within CA264_18335 at 4262.916 kb on + strand, within CA264_18335 at 4262.917 kb on - strand, within CA264_18335 at 4262.917 kb on - strand, within CA264_18335
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,260,599 + CA264_18320 0.73 +1.0 4,260,678 + CA264_18320 0.83 -0.1 4,260,678 + CA264_18320 0.83 +0.1 4,260,678 + CA264_18320 0.83 -0.9 4,260,691 + CA264_18320 0.84 -0.3 4,260,696 - CA264_18320 0.85 -0.4 4,260,728 + CA264_18320 0.89 +0.5 4,260,728 + CA264_18320 0.89 +0.4 4,260,739 - +0.9 4,261,299 + +0.1 4,261,312 - -0.5 4,261,334 - +1.7 4,261,399 - -0.1 4,261,399 - +0.3 4,261,399 - -0.8 4,261,402 + -0.4 4,261,403 - -0.5 4,261,404 + -0.4 4,261,422 - +0.1 4,261,467 + -0.4 4,261,574 - CA264_18330 0.19 +0.5 4,261,603 + CA264_18330 0.25 -0.2 4,261,603 + CA264_18330 0.25 +0.0 4,261,661 - CA264_18330 0.38 -0.3 4,261,661 - CA264_18330 0.38 +0.3 4,261,661 - CA264_18330 0.38 -0.7 4,261,694 + CA264_18330 0.46 -0.7 4,261,739 + CA264_18330 0.56 -0.1 4,261,772 + CA264_18330 0.63 +0.1 4,261,853 - CA264_18330 0.81 -0.0 4,261,953 - -0.4 4,262,031 + -0.4 4,262,031 + -0.9 4,262,031 + -1.3 4,262,031 + +0.3 4,262,080 + +0.3 4,262,080 + -1.1 4,262,081 - -0.4 4,262,081 - -0.0 4,262,136 + -1.4 4,262,265 + CA264_18335 0.13 -0.9 4,262,468 + CA264_18335 0.29 -0.3 4,262,468 + CA264_18335 0.29 -0.3 4,262,469 - CA264_18335 0.29 +0.6 4,262,532 + CA264_18335 0.34 -0.3 4,262,561 + CA264_18335 0.37 -0.5 4,262,620 - CA264_18335 0.41 -0.3 4,262,628 + CA264_18335 0.42 -0.5 4,262,628 + CA264_18335 0.42 +0.5 4,262,629 - CA264_18335 0.42 +0.3 4,262,629 - CA264_18335 0.42 -0.1 4,262,657 + CA264_18335 0.44 +0.1 4,262,657 + CA264_18335 0.44 -0.4 4,262,713 - CA264_18335 0.49 +0.9 4,262,713 - CA264_18335 0.49 -0.2 4,262,713 - CA264_18335 0.49 +2.0 4,262,799 - CA264_18335 0.56 -0.1 4,262,817 + CA264_18335 0.57 +0.3 4,262,818 - CA264_18335 0.57 -1.1 4,262,867 - CA264_18335 0.61 -0.4 4,262,902 - CA264_18335 0.64 -0.9 4,262,916 + CA264_18335 0.65 +0.2 4,262,917 - CA264_18335 0.65 -0.3 4,262,917 - CA264_18335 0.65 -1.2
Or see this region's nucleotide sequence