Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17370 and CA264_17375 are separated by 321 nucleotides CA264_17375 and CA264_17380 are separated by 159 nucleotides CA264_17380 and CA264_17385 are separated by 161 nucleotides
CA264_17370: CA264_17370 - hypothetical protein, at 4,049,568 to 4,050,053
_17370
CA264_17375: CA264_17375 - hypothetical protein, at 4,050,375 to 4,050,662
_17375
CA264_17380: CA264_17380 - SLC13 family permease, at 4,050,822 to 4,052,600
_17380
CA264_17385: CA264_17385 - ABC transporter ATP-binding protein, at 4,052,762 to 4,054,612
_17385
Position (kb)
4050
4051
4052
4053 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4049.924 kb on + strand, within CA264_17370 at 4049.963 kb on + strand, within CA264_17370 at 4049.963 kb on + strand, within CA264_17370 at 4049.963 kb on + strand, within CA264_17370 at 4049.964 kb on - strand, within CA264_17370 at 4050.047 kb on + strand at 4050.047 kb on + strand at 4050.048 kb on - strand at 4050.048 kb on - strand at 4050.048 kb on - strand at 4050.050 kb on - strand at 4050.051 kb on + strand at 4050.051 kb on + strand at 4050.051 kb on + strand at 4050.051 kb on + strand at 4050.051 kb on + strand at 4050.052 kb on - strand at 4050.052 kb on - strand at 4050.055 kb on + strand at 4050.055 kb on + strand at 4050.066 kb on + strand at 4050.217 kb on + strand at 4050.217 kb on + strand at 4050.217 kb on + strand at 4050.221 kb on + strand at 4050.222 kb on - strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.253 kb on + strand at 4050.254 kb on - strand at 4050.254 kb on - strand at 4050.254 kb on - strand at 4050.254 kb on - strand at 4050.256 kb on + strand at 4050.282 kb on + strand at 4050.426 kb on - strand, within CA264_17375 at 4050.461 kb on + strand, within CA264_17375 at 4050.462 kb on - strand, within CA264_17375 at 4050.511 kb on + strand, within CA264_17375 at 4050.544 kb on + strand, within CA264_17375 at 4050.544 kb on + strand, within CA264_17375 at 4050.544 kb on + strand, within CA264_17375 at 4050.545 kb on - strand, within CA264_17375 at 4050.620 kb on + strand, within CA264_17375 at 4050.620 kb on + strand, within CA264_17375 at 4050.627 kb on + strand, within CA264_17375 at 4050.682 kb on - strand at 4050.710 kb on + strand at 4050.734 kb on + strand at 4050.735 kb on - strand at 4050.735 kb on - strand at 4050.736 kb on + strand at 4050.737 kb on - strand at 4050.743 kb on + strand at 4050.744 kb on - strand at 4050.744 kb on - strand at 4050.744 kb on - strand at 4050.853 kb on + strand at 4051.019 kb on + strand, within CA264_17380 at 4051.092 kb on + strand, within CA264_17380 at 4051.147 kb on + strand, within CA264_17380 at 4051.148 kb on - strand, within CA264_17380 at 4051.207 kb on + strand, within CA264_17380 at 4051.311 kb on - strand, within CA264_17380 at 4051.311 kb on - strand, within CA264_17380 at 4051.396 kb on - strand, within CA264_17380 at 4051.396 kb on - strand, within CA264_17380 at 4051.616 kb on + strand, within CA264_17380 at 4051.617 kb on - strand, within CA264_17380 at 4051.617 kb on - strand, within CA264_17380 at 4051.617 kb on - strand, within CA264_17380 at 4051.618 kb on + strand, within CA264_17380 at 4051.622 kb on + strand, within CA264_17380 at 4051.622 kb on + strand, within CA264_17380 at 4051.770 kb on - strand, within CA264_17380 at 4051.782 kb on + strand, within CA264_17380 at 4051.783 kb on - strand, within CA264_17380 at 4051.824 kb on + strand, within CA264_17380 at 4051.824 kb on + strand, within CA264_17380 at 4051.825 kb on - strand, within CA264_17380 at 4051.830 kb on + strand, within CA264_17380 at 4051.831 kb on - strand, within CA264_17380 at 4051.980 kb on - strand, within CA264_17380 at 4052.006 kb on + strand, within CA264_17380 at 4052.011 kb on - strand, within CA264_17380 at 4052.011 kb on - strand, within CA264_17380 at 4052.126 kb on + strand, within CA264_17380 at 4052.127 kb on - strand, within CA264_17380 at 4052.151 kb on + strand, within CA264_17380 at 4052.151 kb on + strand, within CA264_17380 at 4052.152 kb on - strand, within CA264_17380 at 4052.152 kb on - strand, within CA264_17380 at 4052.240 kb on - strand, within CA264_17380 at 4052.251 kb on - strand, within CA264_17380 at 4052.309 kb on + strand, within CA264_17380 at 4052.319 kb on - strand, within CA264_17380 at 4052.339 kb on + strand, within CA264_17380 at 4052.340 kb on - strand, within CA264_17380 at 4052.396 kb on - strand, within CA264_17380 at 4052.433 kb on + strand at 4052.490 kb on + strand at 4052.598 kb on + strand at 4052.724 kb on - strand at 4052.724 kb on - strand at 4052.724 kb on - strand at 4052.764 kb on - strand at 4052.764 kb on - strand at 4052.803 kb on - strand at 4052.914 kb on + strand at 4052.914 kb on + strand at 4052.914 kb on + strand at 4052.914 kb on + strand at 4052.914 kb on + strand at 4052.937 kb on - strand at 4053.034 kb on - strand, within CA264_17385 at 4053.034 kb on - strand, within CA264_17385 at 4053.117 kb on + strand, within CA264_17385 at 4053.117 kb on + strand, within CA264_17385 at 4053.118 kb on - strand, within CA264_17385 at 4053.118 kb on - strand, within CA264_17385 at 4053.188 kb on - strand, within CA264_17385 at 4053.329 kb on + strand, within CA264_17385 at 4053.352 kb on - strand, within CA264_17385 at 4053.503 kb on - strand, within CA264_17385 at 4053.515 kb on + strand, within CA264_17385 at 4053.553 kb on + strand, within CA264_17385 at 4053.597 kb on + strand, within CA264_17385 at 4053.598 kb on - strand, within CA264_17385
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,049,924 + CA264_17370 0.73 +0.5 4,049,963 + CA264_17370 0.81 +0.3 4,049,963 + CA264_17370 0.81 +0.4 4,049,963 + CA264_17370 0.81 -0.3 4,049,964 - CA264_17370 0.81 +0.4 4,050,047 + +0.3 4,050,047 + -1.0 4,050,048 - +0.0 4,050,048 - -0.2 4,050,048 - -0.1 4,050,050 - +0.0 4,050,051 + -0.2 4,050,051 + +0.5 4,050,051 + -0.8 4,050,051 + -0.5 4,050,051 + +0.6 4,050,052 - -0.5 4,050,052 - -0.3 4,050,055 + -0.9 4,050,055 + -0.8 4,050,066 + +0.0 4,050,217 + -0.2 4,050,217 + +0.6 4,050,217 + +0.2 4,050,221 + -1.1 4,050,222 - +0.2 4,050,253 + +0.1 4,050,253 + +1.0 4,050,253 + -0.0 4,050,253 + +0.1 4,050,253 + -0.1 4,050,253 + -0.2 4,050,254 - -0.2 4,050,254 - -0.1 4,050,254 - +0.8 4,050,254 - +0.0 4,050,256 + +0.1 4,050,282 + +0.6 4,050,426 - CA264_17375 0.18 -0.7 4,050,461 + CA264_17375 0.30 -0.8 4,050,462 - CA264_17375 0.30 -0.4 4,050,511 + CA264_17375 0.47 -0.9 4,050,544 + CA264_17375 0.59 +0.1 4,050,544 + CA264_17375 0.59 +0.1 4,050,544 + CA264_17375 0.59 -0.4 4,050,545 - CA264_17375 0.59 +0.7 4,050,620 + CA264_17375 0.85 +1.9 4,050,620 + CA264_17375 0.85 -1.1 4,050,627 + CA264_17375 0.88 -0.9 4,050,682 - +1.5 4,050,710 + -0.3 4,050,734 + +1.2 4,050,735 - -0.2 4,050,735 - +0.6 4,050,736 + -0.5 4,050,737 - +0.3 4,050,743 + +0.4 4,050,744 - -0.3 4,050,744 - -0.4 4,050,744 - -0.2 4,050,853 + +0.1 4,051,019 + CA264_17380 0.11 +0.0 4,051,092 + CA264_17380 0.15 -0.1 4,051,147 + CA264_17380 0.18 +1.3 4,051,148 - CA264_17380 0.18 +1.6 4,051,207 + CA264_17380 0.22 +1.9 4,051,311 - CA264_17380 0.27 -1.4 4,051,311 - CA264_17380 0.27 +0.6 4,051,396 - CA264_17380 0.32 +1.0 4,051,396 - CA264_17380 0.32 -0.5 4,051,616 + CA264_17380 0.45 +0.1 4,051,617 - CA264_17380 0.45 -0.3 4,051,617 - CA264_17380 0.45 -0.6 4,051,617 - CA264_17380 0.45 -0.1 4,051,618 + CA264_17380 0.45 +0.4 4,051,622 + CA264_17380 0.45 -0.5 4,051,622 + CA264_17380 0.45 +1.1 4,051,770 - CA264_17380 0.53 -1.3 4,051,782 + CA264_17380 0.54 -0.4 4,051,783 - CA264_17380 0.54 -0.2 4,051,824 + CA264_17380 0.56 -1.1 4,051,824 + CA264_17380 0.56 +0.0 4,051,825 - CA264_17380 0.56 +0.0 4,051,830 + CA264_17380 0.57 +0.2 4,051,831 - CA264_17380 0.57 -0.2 4,051,980 - CA264_17380 0.65 -0.6 4,052,006 + CA264_17380 0.67 +1.6 4,052,011 - CA264_17380 0.67 +0.2 4,052,011 - CA264_17380 0.67 -1.0 4,052,126 + CA264_17380 0.73 -0.2 4,052,127 - CA264_17380 0.73 +0.1 4,052,151 + CA264_17380 0.75 -0.0 4,052,151 + CA264_17380 0.75 +0.4 4,052,152 - CA264_17380 0.75 -0.9 4,052,152 - CA264_17380 0.75 -1.0 4,052,240 - CA264_17380 0.80 -0.0 4,052,251 - CA264_17380 0.80 -0.3 4,052,309 + CA264_17380 0.84 -0.4 4,052,319 - CA264_17380 0.84 -0.0 4,052,339 + CA264_17380 0.85 +0.3 4,052,340 - CA264_17380 0.85 -0.5 4,052,396 - CA264_17380 0.88 -0.2 4,052,433 + -0.3 4,052,490 + +0.4 4,052,598 + -1.2 4,052,724 - -0.1 4,052,724 - -0.2 4,052,724 - +1.9 4,052,764 - -0.5 4,052,764 - +0.0 4,052,803 - -0.0 4,052,914 + -0.2 4,052,914 + +0.6 4,052,914 + -0.7 4,052,914 + -1.9 4,052,914 + -0.9 4,052,937 - +1.0 4,053,034 - CA264_17385 0.15 -0.3 4,053,034 - CA264_17385 0.15 -0.2 4,053,117 + CA264_17385 0.19 -2.0 4,053,117 + CA264_17385 0.19 +0.2 4,053,118 - CA264_17385 0.19 +1.4 4,053,118 - CA264_17385 0.19 +0.2 4,053,188 - CA264_17385 0.23 -0.3 4,053,329 + CA264_17385 0.31 +1.0 4,053,352 - CA264_17385 0.32 +0.7 4,053,503 - CA264_17385 0.40 +0.3 4,053,515 + CA264_17385 0.41 -0.3 4,053,553 + CA264_17385 0.43 +0.0 4,053,597 + CA264_17385 0.45 -0.4 4,053,598 - CA264_17385 0.45 -0.4
Or see this region's nucleotide sequence