Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17355 and CA264_17360 are separated by 7 nucleotides CA264_17360 and CA264_17365 are separated by 90 nucleotides CA264_17365 and CA264_17370 are separated by 104 nucleotides
CA264_17355: CA264_17355 - ribonuclease R, at 4,045,485 to 4,047,767
_17355
CA264_17360: CA264_17360 - geranyl transferase, at 4,047,775 to 4,048,749
_17360
CA264_17365: CA264_17365 - rhomboid family intramembrane serine protease, at 4,048,840 to 4,049,463
_17365
CA264_17370: CA264_17370 - hypothetical protein, at 4,049,568 to 4,050,053
_17370
Position (kb)
4047
4048
4049 Strain fitness (log2 ratio)
-2
-1
0
1 at 4046.897 kb on + strand, within CA264_17355 at 4046.904 kb on - strand, within CA264_17355 at 4046.937 kb on + strand, within CA264_17355 at 4046.937 kb on + strand, within CA264_17355 at 4046.938 kb on - strand, within CA264_17355 at 4046.968 kb on + strand, within CA264_17355 at 4047.019 kb on - strand, within CA264_17355 at 4047.133 kb on + strand, within CA264_17355 at 4047.134 kb on - strand, within CA264_17355 at 4047.332 kb on + strand, within CA264_17355 at 4047.486 kb on - strand, within CA264_17355 at 4047.546 kb on - strand at 4047.546 kb on - strand at 4047.616 kb on - strand at 4047.636 kb on + strand at 4048.774 kb on - strand at 4048.774 kb on - strand at 4048.774 kb on - strand at 4048.774 kb on - strand at 4048.774 kb on - strand at 4048.817 kb on - strand at 4049.026 kb on - strand, within CA264_17365 at 4049.033 kb on - strand, within CA264_17365 at 4049.093 kb on + strand, within CA264_17365 at 4049.093 kb on + strand, within CA264_17365 at 4049.102 kb on - strand, within CA264_17365 at 4049.127 kb on + strand, within CA264_17365 at 4049.149 kb on + strand, within CA264_17365 at 4049.150 kb on - strand, within CA264_17365 at 4049.150 kb on - strand, within CA264_17365 at 4049.177 kb on - strand, within CA264_17365 at 4049.302 kb on + strand, within CA264_17365 at 4049.311 kb on + strand, within CA264_17365 at 4049.311 kb on + strand, within CA264_17365 at 4049.311 kb on + strand, within CA264_17365 at 4049.312 kb on - strand, within CA264_17365 at 4049.461 kb on + strand at 4049.536 kb on + strand at 4049.542 kb on + strand at 4049.542 kb on + strand at 4049.542 kb on + strand at 4049.552 kb on + strand at 4049.564 kb on + strand at 4049.565 kb on - strand at 4049.565 kb on - strand at 4049.565 kb on - strand at 4049.565 kb on - strand at 4049.565 kb on - strand at 4049.588 kb on + strand at 4049.589 kb on - strand at 4049.589 kb on - strand at 4049.592 kb on + strand at 4049.597 kb on - strand at 4049.697 kb on + strand, within CA264_17370
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 4,046,897 + CA264_17355 0.62 -0.6 4,046,904 - CA264_17355 0.62 -0.2 4,046,937 + CA264_17355 0.64 +0.1 4,046,937 + CA264_17355 0.64 -0.2 4,046,938 - CA264_17355 0.64 -0.1 4,046,968 + CA264_17355 0.65 -0.0 4,047,019 - CA264_17355 0.67 +0.1 4,047,133 + CA264_17355 0.72 +0.6 4,047,134 - CA264_17355 0.72 -0.9 4,047,332 + CA264_17355 0.81 +0.0 4,047,486 - CA264_17355 0.88 -0.5 4,047,546 - -0.4 4,047,546 - -2.6 4,047,616 - +0.5 4,047,636 + +1.6 4,048,774 - +0.1 4,048,774 - +0.8 4,048,774 - +0.6 4,048,774 - -0.1 4,048,774 - +0.0 4,048,817 - -0.8 4,049,026 - CA264_17365 0.30 -0.2 4,049,033 - CA264_17365 0.31 -0.1 4,049,093 + CA264_17365 0.41 +0.8 4,049,093 + CA264_17365 0.41 +0.1 4,049,102 - CA264_17365 0.42 -0.6 4,049,127 + CA264_17365 0.46 +0.0 4,049,149 + CA264_17365 0.50 +0.3 4,049,150 - CA264_17365 0.50 -0.7 4,049,150 - CA264_17365 0.50 -1.5 4,049,177 - CA264_17365 0.54 -0.5 4,049,302 + CA264_17365 0.74 +0.4 4,049,311 + CA264_17365 0.75 -0.9 4,049,311 + CA264_17365 0.75 +0.0 4,049,311 + CA264_17365 0.75 -1.3 4,049,312 - CA264_17365 0.76 -0.5 4,049,461 + +1.0 4,049,536 + +0.1 4,049,542 + +0.2 4,049,542 + -0.0 4,049,542 + -0.5 4,049,552 + -1.2 4,049,564 + +0.6 4,049,565 - +1.2 4,049,565 - +0.4 4,049,565 - -0.3 4,049,565 - -0.2 4,049,565 - -0.2 4,049,588 + -0.9 4,049,589 - -0.3 4,049,589 - -0.2 4,049,592 + +0.1 4,049,597 - +0.9 4,049,697 + CA264_17370 0.27 +0.9
Or see this region's nucleotide sequence