Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15870

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_15860 and CA264_15865 are separated by 15 nucleotidesCA264_15865 and CA264_15870 are separated by 69 nucleotidesCA264_15870 and CA264_15875 are separated by 984 nucleotides CA264_15860: CA264_15860 - amidohydrolase, at 3,701,698 to 3,702,477 _15860 CA264_15865: CA264_15865 - helicase, at 3,702,493 to 3,702,852 _15865 CA264_15870: CA264_15870 - long-chain fatty acid--CoA ligase, at 3,702,922 to 3,704,574 _15870 CA264_15875: CA264_15875 - bacillithiol biosynthesis cysteine-adding enzyme BshC, at 3,705,559 to 3,707,136 _15875 Position (kb) 3702 3703 3704 3705Strain fitness (log2 ratio) -1 0 1 2at 3701.969 kb on - strand, within CA264_15860at 3702.017 kb on - strand, within CA264_15860at 3702.057 kb on + strand, within CA264_15860at 3702.061 kb on + strand, within CA264_15860at 3702.061 kb on + strand, within CA264_15860at 3702.061 kb on + strand, within CA264_15860at 3702.061 kb on + strand, within CA264_15860at 3702.063 kb on + strand, within CA264_15860at 3702.063 kb on + strand, within CA264_15860at 3702.064 kb on - strand, within CA264_15860at 3702.173 kb on - strand, within CA264_15860at 3702.188 kb on - strand, within CA264_15860at 3702.333 kb on + strand, within CA264_15860at 3702.334 kb on - strand, within CA264_15860at 3702.374 kb on + strand, within CA264_15860at 3702.566 kb on - strand, within CA264_15865at 3702.601 kb on + strand, within CA264_15865at 3702.602 kb on - strand, within CA264_15865at 3702.678 kb on - strand, within CA264_15865at 3702.765 kb on - strand, within CA264_15865at 3702.862 kb on + strandat 3702.866 kb on - strandat 3702.874 kb on - strandat 3702.905 kb on + strandat 3702.905 kb on + strandat 3702.906 kb on - strandat 3702.906 kb on - strandat 3702.911 kb on + strandat 3702.924 kb on - strandat 3702.925 kb on + strandat 3702.925 kb on + strandat 3703.000 kb on - strandat 3703.587 kb on + strand, within CA264_15870at 3703.654 kb on + strand, within CA264_15870at 3703.654 kb on + strand, within CA264_15870at 3703.741 kb on + strand, within CA264_15870at 3703.742 kb on - strand, within CA264_15870at 3703.825 kb on + strand, within CA264_15870at 3703.826 kb on - strand, within CA264_15870at 3703.829 kb on + strand, within CA264_15870at 3703.830 kb on - strand, within CA264_15870at 3703.875 kb on + strand, within CA264_15870at 3703.876 kb on - strand, within CA264_15870at 3703.876 kb on - strand, within CA264_15870at 3703.877 kb on + strand, within CA264_15870at 3703.877 kb on + strand, within CA264_15870at 3703.877 kb on + strand, within CA264_15870at 3703.877 kb on + strand, within CA264_15870at 3703.878 kb on - strand, within CA264_15870at 3703.878 kb on - strand, within CA264_15870at 3703.878 kb on - strand, within CA264_15870at 3703.878 kb on - strand, within CA264_15870at 3703.878 kb on - strand, within CA264_15870at 3704.010 kb on - strand, within CA264_15870at 3704.054 kb on + strand, within CA264_15870at 3704.054 kb on + strand, within CA264_15870at 3704.299 kb on + strand, within CA264_15870at 3704.318 kb on + strand, within CA264_15870at 3704.319 kb on - strand, within CA264_15870at 3704.319 kb on - strand, within CA264_15870at 3704.319 kb on - strand, within CA264_15870at 3704.486 kb on + strandat 3704.515 kb on + strandat 3704.516 kb on - strandat 3704.517 kb on + strandat 3704.518 kb on - strandat 3704.547 kb on + strandat 3704.569 kb on - strandat 3704.575 kb on - strandat 3704.585 kb on - strandat 3704.605 kb on + strandat 3704.606 kb on - strandat 3704.649 kb on - strandat 3704.649 kb on - strandat 3704.654 kb on + strandat 3704.654 kb on + strandat 3704.744 kb on + strandat 3704.745 kb on - strandat 3704.745 kb on - strandat 3704.745 kb on - strandat 3704.750 kb on + strandat 3704.750 kb on + strandat 3704.750 kb on + strandat 3704.780 kb on - strandat 3704.780 kb on - strandat 3704.780 kb on - strandat 3704.781 kb on + strandat 3704.782 kb on - strandat 3704.805 kb on + strandat 3704.850 kb on + strandat 3704.850 kb on + strandat 3704.850 kb on + strandat 3704.851 kb on - strandat 3704.958 kb on + strandat 3705.034 kb on + strandat 3705.034 kb on + strandat 3705.034 kb on + strandat 3705.034 kb on + strandat 3705.034 kb on + strandat 3705.041 kb on + strandat 3705.041 kb on + strandat 3705.043 kb on + strandat 3705.043 kb on + strandat 3705.052 kb on + strandat 3705.052 kb on + strandat 3705.053 kb on - strandat 3705.058 kb on + strandat 3705.063 kb on + strandat 3705.104 kb on + strandat 3705.221 kb on + strandat 3705.225 kb on + strandat 3705.255 kb on + strandat 3705.267 kb on + strandat 3705.268 kb on - strandat 3705.268 kb on - strandat 3705.281 kb on + strandat 3705.281 kb on + strandat 3705.329 kb on + strandat 3705.362 kb on - strandat 3705.362 kb on - strandat 3705.368 kb on + strandat 3705.368 kb on + strandat 3705.381 kb on + strandat 3705.382 kb on - strandat 3705.395 kb on + strandat 3705.412 kb on - strandat 3705.423 kb on + strandat 3705.423 kb on + strandat 3705.424 kb on - strandat 3705.456 kb on + strandat 3705.549 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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3,701,969 - CA264_15860 0.35 -0.2
3,702,017 - CA264_15860 0.41 +0.1
3,702,057 + CA264_15860 0.46 +0.4
3,702,061 + CA264_15860 0.47 -0.8
3,702,061 + CA264_15860 0.47 +0.0
3,702,061 + CA264_15860 0.47 +0.8
3,702,061 + CA264_15860 0.47 -0.3
3,702,063 + CA264_15860 0.47 +0.9
3,702,063 + CA264_15860 0.47 -0.5
3,702,064 - CA264_15860 0.47 -1.3
3,702,173 - CA264_15860 0.61 -0.2
3,702,188 - CA264_15860 0.63 -0.3
3,702,333 + CA264_15860 0.81 +1.2
3,702,334 - CA264_15860 0.82 -0.3
3,702,374 + CA264_15860 0.87 +0.0
3,702,566 - CA264_15865 0.20 +0.2
3,702,601 + CA264_15865 0.30 +0.3
3,702,602 - CA264_15865 0.30 +0.2
3,702,678 - CA264_15865 0.51 -0.7
3,702,765 - CA264_15865 0.76 -1.1
3,702,862 + -0.8
3,702,866 - -1.1
3,702,874 - -0.1
3,702,905 + +0.7
3,702,905 + -1.3
3,702,906 - +0.9
3,702,906 - -0.3
3,702,911 + +0.3
3,702,924 - -0.6
3,702,925 + +0.4
3,702,925 + -0.1
3,703,000 - -0.1
3,703,587 + CA264_15870 0.40 +0.1
3,703,654 + CA264_15870 0.44 +0.7
3,703,654 + CA264_15870 0.44 -0.6
3,703,741 + CA264_15870 0.50 -1.2
3,703,742 - CA264_15870 0.50 -0.5
3,703,825 + CA264_15870 0.55 -0.6
3,703,826 - CA264_15870 0.55 -0.5
3,703,829 + CA264_15870 0.55 +0.2
3,703,830 - CA264_15870 0.55 +0.4
3,703,875 + CA264_15870 0.58 -0.3
3,703,876 - CA264_15870 0.58 -0.1
3,703,876 - CA264_15870 0.58 +0.3
3,703,877 + CA264_15870 0.58 +0.5
3,703,877 + CA264_15870 0.58 -0.2
3,703,877 + CA264_15870 0.58 -0.1
3,703,877 + CA264_15870 0.58 +2.3
3,703,878 - CA264_15870 0.58 +0.6
3,703,878 - CA264_15870 0.58 +0.0
3,703,878 - CA264_15870 0.58 -0.1
3,703,878 - CA264_15870 0.58 +1.5
3,703,878 - CA264_15870 0.58 -0.5
3,704,010 - CA264_15870 0.66 -0.2
3,704,054 + CA264_15870 0.68 +0.6
3,704,054 + CA264_15870 0.68 +0.3
3,704,299 + CA264_15870 0.83 +0.5
3,704,318 + CA264_15870 0.84 -1.3
3,704,319 - CA264_15870 0.85 +0.0
3,704,319 - CA264_15870 0.85 +0.0
3,704,319 - CA264_15870 0.85 -0.1
3,704,486 + +0.0
3,704,515 + -1.1
3,704,516 - +1.5
3,704,517 + +1.1
3,704,518 - +1.1
3,704,547 + +0.4
3,704,569 - -0.7
3,704,575 - -0.5
3,704,585 - -0.2
3,704,605 + -0.8
3,704,606 - +0.4
3,704,649 - +0.4
3,704,649 - +0.9
3,704,654 + +0.2
3,704,654 + -0.7
3,704,744 + +0.5
3,704,745 - -0.1
3,704,745 - +0.3
3,704,745 - +1.9
3,704,750 + +0.4
3,704,750 + +1.3
3,704,750 + -0.3
3,704,780 - +0.9
3,704,780 - -0.2
3,704,780 - +1.2
3,704,781 + +0.5
3,704,782 - -0.2
3,704,805 + -0.2
3,704,850 + -0.0
3,704,850 + -0.9
3,704,850 + +0.1
3,704,851 - +0.5
3,704,958 + -0.5
3,705,034 + +0.4
3,705,034 + +0.4
3,705,034 + +1.4
3,705,034 + -0.9
3,705,034 + -0.3
3,705,041 + +0.1
3,705,041 + +0.1
3,705,043 + -0.3
3,705,043 + -0.5
3,705,052 + +0.2
3,705,052 + +0.0
3,705,053 - -0.5
3,705,058 + -0.3
3,705,063 + -0.8
3,705,104 + -0.3
3,705,221 + -0.1
3,705,225 + +0.7
3,705,255 + -0.1
3,705,267 + +0.5
3,705,268 - -0.3
3,705,268 - +0.8
3,705,281 + +0.3
3,705,281 + +0.2
3,705,329 + +0.5
3,705,362 - +0.1
3,705,362 - -1.2
3,705,368 + +1.3
3,705,368 + +0.0
3,705,381 + +0.1
3,705,382 - -0.3
3,705,395 + -0.0
3,705,412 - +0.6
3,705,423 + +0.4
3,705,423 + +0.1
3,705,424 - -0.6
3,705,456 + -0.1
3,705,549 + +0.5

Or see this region's nucleotide sequence