Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15160 and CA264_15165 are separated by 514 nucleotides CA264_15165 and CA264_15170 are separated by 23 nucleotides CA264_15170 and CA264_15175 are separated by 19 nucleotides
CA264_15160: CA264_15160 - nucleoside triphosphate pyrophosphohydrolase, at 3,553,966 to 3,554,775
_15160
CA264_15165: CA264_15165 - flagellar motor protein MotA, at 3,555,290 to 3,556,156
_15165
CA264_15170: CA264_15170 - biopolymer transporter ExbD, at 3,556,180 to 3,556,785
_15170
CA264_15175: CA264_15175 - biopolymer transporter ExbD, at 3,556,805 to 3,557,329
_15175
Position (kb)
3555
3556
3557 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3554.415 kb on - strand, within CA264_15160 at 3554.430 kb on - strand, within CA264_15160 at 3554.505 kb on - strand, within CA264_15160 at 3554.505 kb on - strand, within CA264_15160 at 3554.526 kb on + strand, within CA264_15160 at 3554.527 kb on - strand, within CA264_15160 at 3554.531 kb on + strand, within CA264_15160 at 3554.790 kb on + strand at 3554.808 kb on - strand at 3554.864 kb on + strand at 3554.869 kb on + strand at 3554.936 kb on - strand at 3554.942 kb on + strand at 3555.021 kb on + strand at 3555.059 kb on + strand at 3555.060 kb on - strand at 3555.112 kb on + strand at 3555.152 kb on + strand at 3555.157 kb on + strand at 3555.158 kb on - strand at 3555.158 kb on - strand at 3555.160 kb on + strand at 3555.230 kb on - strand at 3555.325 kb on + strand at 3555.331 kb on - strand at 3555.352 kb on - strand at 3555.407 kb on - strand, within CA264_15165 at 3555.482 kb on + strand, within CA264_15165 at 3555.622 kb on + strand, within CA264_15165 at 3555.623 kb on - strand, within CA264_15165 at 3555.623 kb on - strand, within CA264_15165 at 3555.857 kb on - strand, within CA264_15165 at 3555.865 kb on + strand, within CA264_15165 at 3555.904 kb on + strand, within CA264_15165 at 3555.904 kb on + strand, within CA264_15165 at 3555.910 kb on + strand, within CA264_15165 at 3556.241 kb on + strand, within CA264_15170 at 3556.266 kb on + strand, within CA264_15170 at 3556.305 kb on - strand, within CA264_15170 at 3556.311 kb on + strand, within CA264_15170 at 3556.312 kb on - strand, within CA264_15170 at 3556.380 kb on + strand, within CA264_15170 at 3556.427 kb on + strand, within CA264_15170 at 3556.597 kb on - strand, within CA264_15170 at 3556.626 kb on - strand, within CA264_15170 at 3556.783 kb on + strand at 3556.784 kb on - strand at 3556.804 kb on - strand at 3557.069 kb on + strand, within CA264_15175
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,554,415 - CA264_15160 0.55 -0.7 3,554,430 - CA264_15160 0.57 -1.0 3,554,505 - CA264_15160 0.67 -1.3 3,554,505 - CA264_15160 0.67 -0.2 3,554,526 + CA264_15160 0.69 -3.9 3,554,527 - CA264_15160 0.69 -1.7 3,554,531 + CA264_15160 0.70 -0.7 3,554,790 + +0.0 3,554,808 - +0.8 3,554,864 + -0.9 3,554,869 + +0.5 3,554,936 - +1.0 3,554,942 + -1.4 3,555,021 + -0.3 3,555,059 + -0.8 3,555,060 - -0.6 3,555,112 + -0.9 3,555,152 + +0.0 3,555,157 + +0.4 3,555,158 - -0.9 3,555,158 - +1.1 3,555,160 + -1.9 3,555,230 - -0.0 3,555,325 + -2.7 3,555,331 - -1.9 3,555,352 - -1.7 3,555,407 - CA264_15165 0.13 -1.7 3,555,482 + CA264_15165 0.22 -1.1 3,555,622 + CA264_15165 0.38 -1.4 3,555,623 - CA264_15165 0.38 -1.1 3,555,623 - CA264_15165 0.38 -2.9 3,555,857 - CA264_15165 0.65 -2.9 3,555,865 + CA264_15165 0.66 -2.5 3,555,904 + CA264_15165 0.71 -2.2 3,555,904 + CA264_15165 0.71 -1.8 3,555,910 + CA264_15165 0.72 -0.2 3,556,241 + CA264_15170 0.10 -2.2 3,556,266 + CA264_15170 0.14 -0.8 3,556,305 - CA264_15170 0.21 -1.5 3,556,311 + CA264_15170 0.22 -1.5 3,556,312 - CA264_15170 0.22 +1.9 3,556,380 + CA264_15170 0.33 -0.7 3,556,427 + CA264_15170 0.41 -1.9 3,556,597 - CA264_15170 0.69 -3.1 3,556,626 - CA264_15170 0.74 -1.0 3,556,783 + -0.7 3,556,784 - +0.9 3,556,804 - -2.1 3,557,069 + CA264_15175 0.50 -0.7
Or see this region's nucleotide sequence