Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14875 and CA264_14880 are separated by 49 nucleotides CA264_14880 and CA264_14885 are separated by 8 nucleotides CA264_14885 and CA264_14890 are separated by 90 nucleotides
CA264_14875: CA264_14875 - hypothetical protein, at 3,492,933 to 3,497,735
_14875
CA264_14880: CA264_14880 - 50S ribosomal protein L11 methyltransferase, at 3,497,785 to 3,498,612
_14880
CA264_14885: CA264_14885 - hypothetical protein, at 3,498,621 to 3,498,980
_14885
CA264_14890: CA264_14890 - triose-phosphate isomerase, at 3,499,071 to 3,499,832
_14890
Position (kb)
3498
3499 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3497.625 kb on + strand at 3497.625 kb on + strand at 3497.626 kb on - strand at 3497.637 kb on + strand at 3497.638 kb on - strand at 3497.787 kb on - strand at 3497.787 kb on - strand at 3497.787 kb on - strand at 3497.837 kb on + strand at 3497.838 kb on - strand at 3497.940 kb on - strand, within CA264_14880 at 3497.986 kb on + strand, within CA264_14880 at 3497.987 kb on - strand, within CA264_14880 at 3497.987 kb on - strand, within CA264_14880 at 3497.988 kb on + strand, within CA264_14880 at 3497.989 kb on - strand, within CA264_14880 at 3497.989 kb on - strand, within CA264_14880 at 3498.043 kb on + strand, within CA264_14880 at 3498.043 kb on + strand, within CA264_14880 at 3498.043 kb on + strand, within CA264_14880 at 3498.045 kb on + strand, within CA264_14880 at 3498.046 kb on - strand, within CA264_14880 at 3498.053 kb on + strand, within CA264_14880 at 3498.053 kb on + strand, within CA264_14880 at 3498.053 kb on + strand, within CA264_14880 at 3498.053 kb on + strand, within CA264_14880 at 3498.053 kb on + strand, within CA264_14880 at 3498.054 kb on - strand, within CA264_14880 at 3498.054 kb on - strand, within CA264_14880 at 3498.054 kb on - strand, within CA264_14880 at 3498.054 kb on - strand, within CA264_14880 at 3498.054 kb on - strand, within CA264_14880 at 3498.416 kb on + strand, within CA264_14880 at 3498.421 kb on + strand, within CA264_14880 at 3498.422 kb on - strand, within CA264_14880 at 3498.475 kb on - strand, within CA264_14880 at 3498.475 kb on - strand, within CA264_14880 at 3498.477 kb on - strand, within CA264_14880 at 3498.477 kb on - strand, within CA264_14880 at 3498.477 kb on - strand, within CA264_14880 at 3498.495 kb on - strand, within CA264_14880 at 3498.583 kb on + strand at 3498.583 kb on + strand at 3498.583 kb on + strand at 3498.595 kb on + strand at 3498.604 kb on - strand at 3498.615 kb on + strand at 3498.616 kb on - strand at 3498.616 kb on - strand at 3498.696 kb on + strand, within CA264_14885 at 3498.696 kb on + strand, within CA264_14885 at 3498.701 kb on - strand, within CA264_14885 at 3498.701 kb on - strand, within CA264_14885 at 3498.728 kb on + strand, within CA264_14885 at 3498.850 kb on + strand, within CA264_14885 at 3498.970 kb on - strand at 3498.973 kb on - strand at 3498.980 kb on + strand at 3498.982 kb on + strand at 3499.057 kb on + strand at 3499.062 kb on + strand at 3499.335 kb on + strand, within CA264_14890 at 3499.653 kb on - strand, within CA264_14890 at 3499.838 kb on - strand at 3499.840 kb on + strand at 3499.840 kb on - strand at 3499.859 kb on + strand at 3499.859 kb on + strand at 3499.860 kb on - strand at 3499.861 kb on + strand at 3499.898 kb on + strand at 3499.898 kb on + strand at 3499.899 kb on - strand at 3499.913 kb on + strand at 3499.914 kb on - strand at 3499.914 kb on - strand at 3499.928 kb on - strand at 3499.946 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,497,625 + -1.2 3,497,625 + -1.2 3,497,626 - +1.2 3,497,637 + -0.3 3,497,638 - +0.5 3,497,787 - +0.5 3,497,787 - +0.9 3,497,787 - +0.7 3,497,837 + -1.6 3,497,838 - -0.1 3,497,940 - CA264_14880 0.19 -0.1 3,497,986 + CA264_14880 0.24 +0.6 3,497,987 - CA264_14880 0.24 -0.3 3,497,987 - CA264_14880 0.24 -0.3 3,497,988 + CA264_14880 0.25 -0.2 3,497,989 - CA264_14880 0.25 +0.0 3,497,989 - CA264_14880 0.25 -0.9 3,498,043 + CA264_14880 0.31 +0.6 3,498,043 + CA264_14880 0.31 -0.3 3,498,043 + CA264_14880 0.31 -0.2 3,498,045 + CA264_14880 0.31 +0.2 3,498,046 - CA264_14880 0.32 +0.1 3,498,053 + CA264_14880 0.32 -0.5 3,498,053 + CA264_14880 0.32 +0.4 3,498,053 + CA264_14880 0.32 +0.1 3,498,053 + CA264_14880 0.32 -0.5 3,498,053 + CA264_14880 0.32 +0.7 3,498,054 - CA264_14880 0.32 -1.0 3,498,054 - CA264_14880 0.32 +0.1 3,498,054 - CA264_14880 0.32 -0.1 3,498,054 - CA264_14880 0.32 +0.9 3,498,054 - CA264_14880 0.32 -0.2 3,498,416 + CA264_14880 0.76 -0.4 3,498,421 + CA264_14880 0.77 -0.0 3,498,422 - CA264_14880 0.77 +0.4 3,498,475 - CA264_14880 0.83 -0.6 3,498,475 - CA264_14880 0.83 +0.5 3,498,477 - CA264_14880 0.84 +0.1 3,498,477 - CA264_14880 0.84 +0.5 3,498,477 - CA264_14880 0.84 +0.0 3,498,495 - CA264_14880 0.86 +0.8 3,498,583 + +0.5 3,498,583 + -0.9 3,498,583 + +1.5 3,498,595 + +0.1 3,498,604 - +0.1 3,498,615 + +0.1 3,498,616 - -0.9 3,498,616 - +1.4 3,498,696 + CA264_14885 0.21 +0.8 3,498,696 + CA264_14885 0.21 +0.9 3,498,701 - CA264_14885 0.22 -0.1 3,498,701 - CA264_14885 0.22 +0.1 3,498,728 + CA264_14885 0.30 +0.2 3,498,850 + CA264_14885 0.64 -0.5 3,498,970 - +1.0 3,498,973 - -0.6 3,498,980 + -0.1 3,498,982 + -0.1 3,499,057 + -1.4 3,499,062 + +0.2 3,499,335 + CA264_14890 0.35 -1.9 3,499,653 - CA264_14890 0.76 -3.8 3,499,838 - +1.5 3,499,840 + +0.2 3,499,840 - +0.4 3,499,859 + +1.3 3,499,859 + -0.7 3,499,860 - +0.7 3,499,861 + -0.0 3,499,898 + +0.8 3,499,898 + -0.1 3,499,899 - +0.0 3,499,913 + -0.1 3,499,914 - -0.6 3,499,914 - +0.3 3,499,928 - +0.0 3,499,946 - -0.0
Or see this region's nucleotide sequence