Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14340 and CA264_14345 are separated by 474 nucleotides CA264_14345 and CA264_14350 are separated by 201 nucleotides CA264_14350 and CA264_14355 are separated by 3 nucleotides CA264_14355 and CA264_14360 are separated by 32 nucleotides
CA264_14340: CA264_14340 - disulfide bond formation protein DsbD, at 3,367,188 to 3,369,377
_14340
CA264_14345: CA264_14345 - hypothetical protein, at 3,369,852 to 3,370,160
_14345
CA264_14350: CA264_14350 - hemolysin, at 3,370,362 to 3,371,675
_14350
CA264_14355: CA264_14355 - hypothetical protein, at 3,371,679 to 3,372,134
_14355
CA264_14360: CA264_14360 - gamma carbonic anhydrase family protein, at 3,372,167 to 3,372,691
_14360
Position (kb)
3370
3371
3372 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3369.379 kb on + strand at 3369.380 kb on - strand at 3369.384 kb on + strand at 3369.384 kb on + strand at 3369.385 kb on - strand at 3369.385 kb on - strand at 3369.385 kb on - strand at 3369.436 kb on - strand at 3369.464 kb on - strand at 3369.521 kb on - strand at 3369.549 kb on + strand at 3369.551 kb on + strand at 3369.551 kb on + strand at 3369.552 kb on - strand at 3369.552 kb on - strand at 3369.572 kb on - strand at 3369.653 kb on + strand at 3369.689 kb on + strand at 3369.691 kb on + strand at 3369.700 kb on + strand at 3369.757 kb on + strand at 3369.757 kb on + strand at 3369.758 kb on - strand at 3369.866 kb on - strand at 3369.915 kb on - strand, within CA264_14345 at 3369.976 kb on - strand, within CA264_14345 at 3369.976 kb on - strand, within CA264_14345 at 3369.996 kb on + strand, within CA264_14345 at 3369.996 kb on + strand, within CA264_14345 at 3369.997 kb on - strand, within CA264_14345 at 3369.998 kb on + strand, within CA264_14345 at 3370.002 kb on + strand, within CA264_14345 at 3370.003 kb on - strand, within CA264_14345 at 3370.218 kb on - strand at 3370.218 kb on - strand at 3370.238 kb on - strand at 3370.264 kb on + strand at 3370.270 kb on - strand at 3370.280 kb on + strand at 3370.280 kb on + strand at 3370.281 kb on - strand at 3370.287 kb on + strand at 3370.287 kb on + strand at 3370.287 kb on + strand at 3370.287 kb on + strand at 3370.288 kb on - strand at 3370.288 kb on - strand at 3370.308 kb on + strand at 3370.309 kb on - strand at 3370.438 kb on + strand at 3370.445 kb on - strand at 3370.460 kb on - strand at 3370.557 kb on - strand, within CA264_14350 at 3370.676 kb on - strand, within CA264_14350 at 3370.676 kb on - strand, within CA264_14350 at 3370.676 kb on - strand, within CA264_14350 at 3370.694 kb on + strand, within CA264_14350 at 3370.695 kb on - strand, within CA264_14350 at 3370.812 kb on - strand, within CA264_14350 at 3370.870 kb on + strand, within CA264_14350 at 3371.091 kb on - strand, within CA264_14350 at 3371.118 kb on + strand, within CA264_14350 at 3371.148 kb on - strand, within CA264_14350 at 3371.195 kb on + strand, within CA264_14350 at 3371.348 kb on + strand, within CA264_14350 at 3371.351 kb on + strand, within CA264_14350 at 3371.399 kb on - strand, within CA264_14350 at 3371.437 kb on + strand, within CA264_14350 at 3371.438 kb on - strand, within CA264_14350 at 3371.534 kb on - strand, within CA264_14350 at 3371.586 kb on + strand at 3371.586 kb on + strand at 3371.587 kb on - strand at 3371.769 kb on + strand, within CA264_14355 at 3371.809 kb on - strand, within CA264_14355 at 3371.813 kb on - strand, within CA264_14355 at 3371.813 kb on - strand, within CA264_14355 at 3371.849 kb on + strand, within CA264_14355 at 3371.849 kb on + strand, within CA264_14355 at 3371.850 kb on - strand, within CA264_14355 at 3371.954 kb on + strand, within CA264_14355 at 3371.954 kb on + strand, within CA264_14355 at 3371.956 kb on + strand, within CA264_14355 at 3371.957 kb on - strand, within CA264_14355 at 3372.168 kb on + strand at 3372.169 kb on - strand at 3372.169 kb on - strand at 3372.202 kb on - strand at 3372.210 kb on + strand at 3372.211 kb on - strand at 3372.263 kb on + strand, within CA264_14360 at 3372.346 kb on + strand, within CA264_14360 at 3372.346 kb on + strand, within CA264_14360 at 3372.347 kb on - strand, within CA264_14360 at 3372.517 kb on + strand, within CA264_14360 at 3372.518 kb on - strand, within CA264_14360 at 3372.518 kb on - strand, within CA264_14360
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 3,369,379 + +0.2 3,369,380 - +0.5 3,369,384 + +0.2 3,369,384 + -0.8 3,369,385 - +1.4 3,369,385 - -0.6 3,369,385 - -1.6 3,369,436 - -0.9 3,369,464 - -0.0 3,369,521 - -0.4 3,369,549 + -0.6 3,369,551 + +0.9 3,369,551 + +1.2 3,369,552 - +1.4 3,369,552 - +0.7 3,369,572 - -0.6 3,369,653 + +0.7 3,369,689 + +0.4 3,369,691 + +1.0 3,369,700 + +2.2 3,369,757 + -0.7 3,369,757 + +0.9 3,369,758 - -0.8 3,369,866 - -1.0 3,369,915 - CA264_14345 0.20 +0.7 3,369,976 - CA264_14345 0.40 -0.2 3,369,976 - CA264_14345 0.40 -0.5 3,369,996 + CA264_14345 0.47 -0.3 3,369,996 + CA264_14345 0.47 -0.1 3,369,997 - CA264_14345 0.47 +0.0 3,369,998 + CA264_14345 0.47 -0.4 3,370,002 + CA264_14345 0.49 -0.1 3,370,003 - CA264_14345 0.49 +0.1 3,370,218 - +0.6 3,370,218 - -0.7 3,370,238 - -0.5 3,370,264 + -0.6 3,370,270 - -2.4 3,370,280 + -1.2 3,370,280 + -0.8 3,370,281 - -0.5 3,370,287 + -0.8 3,370,287 + -1.5 3,370,287 + -1.2 3,370,287 + -1.3 3,370,288 - +0.1 3,370,288 - -0.9 3,370,308 + -1.1 3,370,309 - -0.3 3,370,438 + +0.9 3,370,445 - +0.4 3,370,460 - +0.2 3,370,557 - CA264_14350 0.15 +1.2 3,370,676 - CA264_14350 0.24 +0.9 3,370,676 - CA264_14350 0.24 -1.4 3,370,676 - CA264_14350 0.24 +0.8 3,370,694 + CA264_14350 0.25 +0.1 3,370,695 - CA264_14350 0.25 +1.2 3,370,812 - CA264_14350 0.34 +0.3 3,370,870 + CA264_14350 0.39 +0.4 3,371,091 - CA264_14350 0.55 +0.3 3,371,118 + CA264_14350 0.58 -0.4 3,371,148 - CA264_14350 0.60 +0.4 3,371,195 + CA264_14350 0.63 -0.0 3,371,348 + CA264_14350 0.75 +0.1 3,371,351 + CA264_14350 0.75 +0.3 3,371,399 - CA264_14350 0.79 +1.3 3,371,437 + CA264_14350 0.82 +0.4 3,371,438 - CA264_14350 0.82 -0.7 3,371,534 - CA264_14350 0.89 -0.3 3,371,586 + +0.4 3,371,586 + +0.4 3,371,587 - +0.3 3,371,769 + CA264_14355 0.20 -0.9 3,371,809 - CA264_14355 0.29 -0.0 3,371,813 - CA264_14355 0.29 +0.7 3,371,813 - CA264_14355 0.29 -0.3 3,371,849 + CA264_14355 0.37 -0.6 3,371,849 + CA264_14355 0.37 -0.4 3,371,850 - CA264_14355 0.38 -0.0 3,371,954 + CA264_14355 0.60 -0.2 3,371,954 + CA264_14355 0.60 +0.1 3,371,956 + CA264_14355 0.61 -0.6 3,371,957 - CA264_14355 0.61 +0.4 3,372,168 + -0.1 3,372,169 - -0.1 3,372,169 - +0.5 3,372,202 - -0.6 3,372,210 + +0.3 3,372,211 - +1.3 3,372,263 + CA264_14360 0.18 +0.2 3,372,346 + CA264_14360 0.34 -0.6 3,372,346 + CA264_14360 0.34 +0.4 3,372,347 - CA264_14360 0.34 -0.4 3,372,517 + CA264_14360 0.67 -0.1 3,372,518 - CA264_14360 0.67 +1.7 3,372,518 - CA264_14360 0.67 +0.1
Or see this region's nucleotide sequence