Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12680 and CA264_12685 are separated by 157 nucleotides CA264_12685 and CA264_12690 are separated by 246 nucleotides CA264_12690 and CA264_12695 are separated by 111 nucleotides
CA264_12680: CA264_12680 - hypothetical protein, at 2,958,284 to 2,959,918
_12680
CA264_12685: CA264_12685 - hypothetical protein, at 2,960,076 to 2,960,261
_12685
CA264_12690: CA264_12690 - tRNA-Leu, at 2,960,508 to 2,960,589
_12690
CA264_12695: CA264_12695 - phosphatase PAP2 family protein, at 2,960,701 to 2,961,420
_12695
Position (kb)
2960
2961 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2959.076 kb on + strand, within CA264_12680 at 2959.119 kb on + strand, within CA264_12680 at 2959.119 kb on + strand, within CA264_12680 at 2959.119 kb on + strand, within CA264_12680 at 2959.119 kb on + strand, within CA264_12680 at 2959.120 kb on - strand, within CA264_12680 at 2959.177 kb on + strand, within CA264_12680 at 2959.231 kb on + strand, within CA264_12680 at 2959.341 kb on - strand, within CA264_12680 at 2959.522 kb on - strand, within CA264_12680 at 2959.583 kb on - strand, within CA264_12680 at 2959.583 kb on - strand, within CA264_12680 at 2959.606 kb on + strand, within CA264_12680 at 2959.607 kb on - strand, within CA264_12680 at 2959.629 kb on + strand, within CA264_12680 at 2959.630 kb on - strand, within CA264_12680 at 2959.630 kb on - strand, within CA264_12680 at 2959.630 kb on - strand, within CA264_12680 at 2959.630 kb on - strand, within CA264_12680 at 2959.630 kb on - strand, within CA264_12680 at 2959.634 kb on + strand, within CA264_12680 at 2959.806 kb on + strand at 2959.831 kb on - strand at 2959.914 kb on - strand at 2959.914 kb on - strand at 2959.917 kb on - strand at 2959.957 kb on + strand at 2959.958 kb on - strand at 2959.992 kb on + strand at 2960.070 kb on - strand at 2960.129 kb on + strand, within CA264_12685 at 2960.171 kb on + strand, within CA264_12685 at 2960.171 kb on + strand, within CA264_12685 at 2960.171 kb on + strand, within CA264_12685 at 2960.172 kb on - strand, within CA264_12685 at 2960.172 kb on - strand, within CA264_12685 at 2960.172 kb on - strand, within CA264_12685 at 2960.172 kb on - strand, within CA264_12685 at 2960.173 kb on + strand, within CA264_12685 at 2960.173 kb on + strand, within CA264_12685 at 2960.174 kb on - strand, within CA264_12685 at 2960.230 kb on + strand, within CA264_12685 at 2960.230 kb on + strand, within CA264_12685 at 2960.231 kb on - strand, within CA264_12685 at 2960.231 kb on - strand, within CA264_12685 at 2960.341 kb on - strand at 2960.341 kb on - strand at 2960.373 kb on - strand at 2960.497 kb on - strand at 2960.497 kb on - strand at 2960.599 kb on + strand at 2960.600 kb on - strand at 2960.601 kb on + strand at 2960.602 kb on - strand at 2960.784 kb on + strand, within CA264_12695 at 2960.840 kb on + strand, within CA264_12695 at 2960.845 kb on + strand, within CA264_12695 at 2960.889 kb on + strand, within CA264_12695 at 2960.985 kb on + strand, within CA264_12695 at 2961.060 kb on - strand, within CA264_12695 at 2961.084 kb on + strand, within CA264_12695 at 2961.146 kb on + strand, within CA264_12695 at 2961.146 kb on + strand, within CA264_12695 at 2961.147 kb on - strand, within CA264_12695 at 2961.147 kb on - strand, within CA264_12695 at 2961.149 kb on + strand, within CA264_12695 at 2961.216 kb on + strand, within CA264_12695
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,959,076 + CA264_12680 0.48 +0.1 2,959,119 + CA264_12680 0.51 -0.9 2,959,119 + CA264_12680 0.51 -0.8 2,959,119 + CA264_12680 0.51 -0.7 2,959,119 + CA264_12680 0.51 +0.1 2,959,120 - CA264_12680 0.51 +0.2 2,959,177 + CA264_12680 0.55 +0.1 2,959,231 + CA264_12680 0.58 -2.4 2,959,341 - CA264_12680 0.65 -0.5 2,959,522 - CA264_12680 0.76 +0.1 2,959,583 - CA264_12680 0.79 -0.4 2,959,583 - CA264_12680 0.79 -0.2 2,959,606 + CA264_12680 0.81 -0.6 2,959,607 - CA264_12680 0.81 +2.0 2,959,629 + CA264_12680 0.82 -0.0 2,959,630 - CA264_12680 0.82 +0.5 2,959,630 - CA264_12680 0.82 -0.2 2,959,630 - CA264_12680 0.82 -0.2 2,959,630 - CA264_12680 0.82 +0.0 2,959,630 - CA264_12680 0.82 -0.2 2,959,634 + CA264_12680 0.83 -1.1 2,959,806 + -0.2 2,959,831 - -1.9 2,959,914 - +0.0 2,959,914 - -0.2 2,959,917 - -0.4 2,959,957 + -1.0 2,959,958 - +1.2 2,959,992 + -0.4 2,960,070 - +0.6 2,960,129 + CA264_12685 0.28 -0.5 2,960,171 + CA264_12685 0.51 +0.1 2,960,171 + CA264_12685 0.51 -0.4 2,960,171 + CA264_12685 0.51 -0.1 2,960,172 - CA264_12685 0.52 +0.7 2,960,172 - CA264_12685 0.52 -0.2 2,960,172 - CA264_12685 0.52 +0.8 2,960,172 - CA264_12685 0.52 -0.6 2,960,173 + CA264_12685 0.52 +0.4 2,960,173 + CA264_12685 0.52 +0.2 2,960,174 - CA264_12685 0.53 +0.8 2,960,230 + CA264_12685 0.83 +0.1 2,960,230 + CA264_12685 0.83 -0.1 2,960,231 - CA264_12685 0.83 +0.6 2,960,231 - CA264_12685 0.83 +0.8 2,960,341 - +0.9 2,960,341 - +0.0 2,960,373 - -0.4 2,960,497 - +0.1 2,960,497 - -0.7 2,960,599 + +0.2 2,960,600 - +0.1 2,960,601 + -0.1 2,960,602 - +0.1 2,960,784 + CA264_12695 0.12 +0.0 2,960,840 + CA264_12695 0.19 +0.2 2,960,845 + CA264_12695 0.20 -0.9 2,960,889 + CA264_12695 0.26 -0.9 2,960,985 + CA264_12695 0.39 -0.6 2,961,060 - CA264_12695 0.50 +0.2 2,961,084 + CA264_12695 0.53 +0.0 2,961,146 + CA264_12695 0.62 +0.3 2,961,146 + CA264_12695 0.62 +0.1 2,961,147 - CA264_12695 0.62 +1.2 2,961,147 - CA264_12695 0.62 +0.5 2,961,149 + CA264_12695 0.62 +0.3 2,961,216 + CA264_12695 0.72 -1.3
Or see this region's nucleotide sequence