Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12025 and CA264_12030 are separated by 265 nucleotides CA264_12030 and CA264_12035 are separated by 317 nucleotides
CA264_12025: CA264_12025 - hypothetical protein, at 2,797,509 to 2,798,690
_12025
CA264_12030: CA264_12030 - aspartate aminotransferase family protein, at 2,798,956 to 2,800,152
_12030
CA264_12035: CA264_12035 - SLC13 family permease, at 2,800,470 to 2,802,227
_12035
Position (kb)
2798
2799
2800
2801 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2798.030 kb on - strand, within CA264_12025 at 2798.059 kb on - strand, within CA264_12025 at 2798.059 kb on - strand, within CA264_12025 at 2798.059 kb on - strand, within CA264_12025 at 2798.115 kb on + strand, within CA264_12025 at 2798.259 kb on + strand, within CA264_12025 at 2798.259 kb on + strand, within CA264_12025 at 2798.260 kb on - strand, within CA264_12025 at 2798.260 kb on - strand, within CA264_12025 at 2798.260 kb on - strand, within CA264_12025 at 2798.264 kb on - strand, within CA264_12025 at 2798.264 kb on - strand, within CA264_12025 at 2798.264 kb on - strand, within CA264_12025 at 2798.269 kb on - strand, within CA264_12025 at 2798.269 kb on - strand, within CA264_12025 at 2798.409 kb on - strand, within CA264_12025 at 2798.430 kb on + strand at 2798.431 kb on - strand, within CA264_12025 at 2798.431 kb on - strand, within CA264_12025 at 2798.431 kb on - strand, within CA264_12025 at 2798.431 kb on - strand, within CA264_12025 at 2798.432 kb on + strand, within CA264_12025 at 2798.432 kb on + strand, within CA264_12025 at 2798.433 kb on - strand, within CA264_12025 at 2798.583 kb on + strand at 2798.584 kb on - strand at 2798.606 kb on + strand at 2798.607 kb on - strand at 2798.678 kb on - strand at 2798.684 kb on - strand at 2798.684 kb on - strand at 2798.695 kb on - strand at 2798.695 kb on - strand at 2798.697 kb on - strand at 2798.708 kb on + strand at 2798.762 kb on + strand at 2798.809 kb on + strand at 2798.809 kb on + strand at 2798.810 kb on - strand at 2798.813 kb on + strand at 2798.813 kb on + strand at 2798.814 kb on - strand at 2798.816 kb on - strand at 2798.816 kb on - strand at 2798.816 kb on - strand at 2798.816 kb on - strand at 2798.816 kb on - strand at 2798.816 kb on - strand at 2798.950 kb on - strand at 2798.950 kb on - strand at 2798.958 kb on + strand at 2799.043 kb on + strand at 2799.044 kb on - strand at 2799.050 kb on - strand at 2799.140 kb on + strand, within CA264_12030 at 2799.266 kb on + strand, within CA264_12030 at 2799.501 kb on + strand, within CA264_12030 at 2799.681 kb on - strand, within CA264_12030 at 2799.729 kb on + strand, within CA264_12030 at 2799.771 kb on + strand, within CA264_12030 at 2799.771 kb on + strand, within CA264_12030 at 2799.860 kb on + strand, within CA264_12030 at 2799.861 kb on - strand, within CA264_12030 at 2800.021 kb on - strand, within CA264_12030 at 2800.197 kb on + strand at 2800.238 kb on - strand at 2800.244 kb on - strand at 2800.340 kb on + strand at 2800.345 kb on + strand at 2800.345 kb on + strand at 2800.346 kb on - strand at 2800.346 kb on - strand at 2800.376 kb on + strand at 2800.377 kb on - strand at 2800.377 kb on - strand at 2800.377 kb on - strand at 2800.418 kb on - strand at 2800.432 kb on + strand at 2800.433 kb on - strand at 2800.433 kb on - strand at 2800.449 kb on + strand at 2800.450 kb on - strand at 2800.451 kb on + strand at 2800.451 kb on + strand at 2800.452 kb on - strand at 2800.452 kb on - strand at 2800.517 kb on - strand at 2800.559 kb on + strand at 2800.589 kb on + strand at 2800.640 kb on + strand at 2800.641 kb on - strand at 2800.642 kb on + strand at 2800.643 kb on - strand at 2800.657 kb on + strand, within CA264_12035 at 2800.661 kb on + strand, within CA264_12035 at 2800.662 kb on - strand, within CA264_12035 at 2800.765 kb on + strand, within CA264_12035 at 2801.005 kb on + strand, within CA264_12035 at 2801.037 kb on + strand, within CA264_12035 at 2801.038 kb on - strand, within CA264_12035 at 2801.038 kb on - strand, within CA264_12035
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,798,030 - CA264_12025 0.44 +1.1 2,798,059 - CA264_12025 0.47 -0.5 2,798,059 - CA264_12025 0.47 -0.5 2,798,059 - CA264_12025 0.47 -0.1 2,798,115 + CA264_12025 0.51 -1.2 2,798,259 + CA264_12025 0.63 -0.1 2,798,259 + CA264_12025 0.63 +1.2 2,798,260 - CA264_12025 0.64 -0.3 2,798,260 - CA264_12025 0.64 -0.2 2,798,260 - CA264_12025 0.64 -0.7 2,798,264 - CA264_12025 0.64 +0.8 2,798,264 - CA264_12025 0.64 +0.2 2,798,264 - CA264_12025 0.64 -0.9 2,798,269 - CA264_12025 0.64 -1.0 2,798,269 - CA264_12025 0.64 -0.2 2,798,409 - CA264_12025 0.76 +0.1 2,798,430 + +2.4 2,798,431 - CA264_12025 0.78 -0.6 2,798,431 - CA264_12025 0.78 -0.0 2,798,431 - CA264_12025 0.78 +0.3 2,798,431 - CA264_12025 0.78 -0.2 2,798,432 + CA264_12025 0.78 +0.8 2,798,432 + CA264_12025 0.78 -0.2 2,798,433 - CA264_12025 0.78 -1.3 2,798,583 + -1.1 2,798,584 - -0.8 2,798,606 + -1.1 2,798,607 - -0.3 2,798,678 - +0.0 2,798,684 - -0.4 2,798,684 - +0.0 2,798,695 - -0.5 2,798,695 - +0.6 2,798,697 - +0.5 2,798,708 + -0.7 2,798,762 + -0.0 2,798,809 + +0.1 2,798,809 + +0.1 2,798,810 - +0.1 2,798,813 + -0.1 2,798,813 + -1.3 2,798,814 - +0.3 2,798,816 - -0.9 2,798,816 - -0.2 2,798,816 - +0.2 2,798,816 - -0.6 2,798,816 - -1.0 2,798,816 - +0.6 2,798,950 - -0.2 2,798,950 - +0.8 2,798,958 + -0.6 2,799,043 + -0.5 2,799,044 - -0.6 2,799,050 - -0.2 2,799,140 + CA264_12030 0.15 -0.1 2,799,266 + CA264_12030 0.26 -1.5 2,799,501 + CA264_12030 0.46 -0.4 2,799,681 - CA264_12030 0.61 +0.8 2,799,729 + CA264_12030 0.65 -1.5 2,799,771 + CA264_12030 0.68 -2.8 2,799,771 + CA264_12030 0.68 +0.2 2,799,860 + CA264_12030 0.76 -1.0 2,799,861 - CA264_12030 0.76 -0.6 2,800,021 - CA264_12030 0.89 -0.6 2,800,197 + +0.6 2,800,238 - +0.1 2,800,244 - +0.0 2,800,340 + +0.6 2,800,345 + -1.0 2,800,345 + -0.2 2,800,346 - -2.8 2,800,346 - -0.5 2,800,376 + -0.2 2,800,377 - +0.2 2,800,377 - -0.3 2,800,377 - +0.4 2,800,418 - -0.7 2,800,432 + -0.4 2,800,433 - +0.1 2,800,433 - +0.0 2,800,449 + -0.4 2,800,450 - -0.1 2,800,451 + +0.6 2,800,451 + +0.2 2,800,452 - -0.2 2,800,452 - +0.7 2,800,517 - +1.9 2,800,559 + -0.1 2,800,589 + -0.1 2,800,640 + +0.3 2,800,641 - -0.2 2,800,642 + +0.1 2,800,643 - +0.8 2,800,657 + CA264_12035 0.11 +0.3 2,800,661 + CA264_12035 0.11 +0.1 2,800,662 - CA264_12035 0.11 -1.1 2,800,765 + CA264_12035 0.17 +1.0 2,801,005 + CA264_12035 0.30 -0.2 2,801,037 + CA264_12035 0.32 +0.6 2,801,038 - CA264_12035 0.32 +0.3 2,801,038 - CA264_12035 0.32 +0.5
Or see this region's nucleotide sequence