Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11175 and CA264_11180 are separated by 385 nucleotides CA264_11180 and CA264_11185 overlap by 20 nucleotides CA264_11185 and CA264_11190 are separated by 289 nucleotides
CA264_11175: CA264_11175 - hypothetical protein, at 2,589,088 to 2,589,582
_11175
CA264_11180: CA264_11180 - thioredoxin family protein, at 2,589,968 to 2,590,525
_11180
CA264_11185: CA264_11185 - hypothetical protein, at 2,590,506 to 2,591,342
_11185
CA264_11190: CA264_11190 - peptidase M23, at 2,591,632 to 2,592,897
_11190
Position (kb)
2590
2591
2592 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2589.535 kb on + strand at 2589.536 kb on - strand at 2589.590 kb on + strand at 2589.677 kb on + strand at 2589.678 kb on - strand at 2589.711 kb on - strand at 2589.779 kb on - strand at 2589.779 kb on - strand at 2589.823 kb on - strand at 2589.829 kb on - strand at 2589.895 kb on + strand at 2589.896 kb on - strand at 2589.897 kb on + strand at 2589.919 kb on - strand at 2589.919 kb on - strand at 2589.927 kb on + strand at 2589.927 kb on + strand at 2589.928 kb on - strand at 2589.928 kb on - strand at 2589.928 kb on - strand at 2589.930 kb on + strand at 2589.930 kb on + strand at 2589.931 kb on - strand at 2589.937 kb on + strand at 2589.937 kb on + strand at 2589.937 kb on + strand at 2589.937 kb on + strand at 2589.938 kb on - strand at 2589.938 kb on - strand at 2589.938 kb on - strand at 2589.943 kb on - strand at 2589.943 kb on - strand at 2589.968 kb on - strand at 2590.065 kb on + strand, within CA264_11180 at 2590.115 kb on + strand, within CA264_11180 at 2590.115 kb on + strand, within CA264_11180 at 2590.116 kb on - strand, within CA264_11180 at 2590.119 kb on + strand, within CA264_11180 at 2590.120 kb on - strand, within CA264_11180 at 2590.120 kb on - strand, within CA264_11180 at 2590.236 kb on - strand, within CA264_11180 at 2590.236 kb on - strand, within CA264_11180 at 2590.313 kb on + strand, within CA264_11180 at 2590.327 kb on + strand, within CA264_11180 at 2590.328 kb on - strand, within CA264_11180 at 2590.328 kb on - strand, within CA264_11180 at 2590.370 kb on + strand, within CA264_11180 at 2590.371 kb on - strand, within CA264_11180 at 2590.402 kb on + strand, within CA264_11180 at 2590.418 kb on - strand, within CA264_11180 at 2590.609 kb on + strand, within CA264_11185 at 2590.619 kb on + strand, within CA264_11185 at 2590.620 kb on - strand, within CA264_11185 at 2590.620 kb on - strand, within CA264_11185 at 2590.620 kb on - strand, within CA264_11185 at 2590.621 kb on + strand, within CA264_11185 at 2590.621 kb on + strand, within CA264_11185 at 2590.621 kb on + strand, within CA264_11185 at 2590.621 kb on + strand, within CA264_11185 at 2590.621 kb on + strand, within CA264_11185 at 2590.622 kb on - strand, within CA264_11185 at 2590.641 kb on + strand, within CA264_11185 at 2590.641 kb on + strand, within CA264_11185 at 2590.641 kb on + strand, within CA264_11185 at 2590.641 kb on + strand, within CA264_11185 at 2590.641 kb on + strand, within CA264_11185 at 2590.642 kb on - strand, within CA264_11185 at 2590.645 kb on + strand, within CA264_11185 at 2590.812 kb on - strand, within CA264_11185 at 2590.861 kb on + strand, within CA264_11185 at 2590.862 kb on - strand, within CA264_11185 at 2590.862 kb on - strand, within CA264_11185 at 2590.865 kb on - strand, within CA264_11185 at 2590.865 kb on - strand, within CA264_11185 at 2590.882 kb on + strand, within CA264_11185 at 2590.904 kb on - strand, within CA264_11185 at 2590.904 kb on - strand, within CA264_11185 at 2590.969 kb on + strand, within CA264_11185 at 2590.969 kb on + strand, within CA264_11185 at 2590.969 kb on + strand, within CA264_11185 at 2590.970 kb on - strand, within CA264_11185 at 2590.970 kb on - strand, within CA264_11185 at 2590.979 kb on - strand, within CA264_11185 at 2591.039 kb on + strand, within CA264_11185 at 2591.059 kb on + strand, within CA264_11185 at 2591.098 kb on + strand, within CA264_11185 at 2591.098 kb on + strand, within CA264_11185 at 2591.098 kb on + strand, within CA264_11185 at 2591.099 kb on - strand, within CA264_11185 at 2591.099 kb on - strand, within CA264_11185 at 2591.167 kb on + strand, within CA264_11185 at 2591.168 kb on - strand, within CA264_11185 at 2591.204 kb on + strand, within CA264_11185 at 2591.206 kb on + strand, within CA264_11185 at 2591.206 kb on + strand, within CA264_11185 at 2591.244 kb on - strand, within CA264_11185 at 2591.244 kb on - strand, within CA264_11185 at 2591.283 kb on - strand at 2591.328 kb on + strand at 2591.334 kb on - strand at 2591.395 kb on + strand at 2591.468 kb on - strand at 2591.468 kb on - strand at 2591.503 kb on + strand at 2591.514 kb on + strand at 2591.514 kb on + strand at 2591.528 kb on - strand at 2591.528 kb on - strand at 2591.531 kb on - strand at 2591.548 kb on - strand at 2591.585 kb on + strand at 2591.675 kb on + strand at 2591.772 kb on + strand, within CA264_11190 at 2591.856 kb on - strand, within CA264_11190 at 2591.868 kb on - strand, within CA264_11190 at 2591.885 kb on + strand, within CA264_11190 at 2591.886 kb on - strand, within CA264_11190 at 2591.886 kb on - strand, within CA264_11190 at 2591.997 kb on + strand, within CA264_11190 at 2592.037 kb on + strand, within CA264_11190 at 2592.039 kb on + strand, within CA264_11190 at 2592.040 kb on - strand, within CA264_11190 at 2592.045 kb on + strand, within CA264_11190 at 2592.289 kb on + strand, within CA264_11190 at 2592.289 kb on + strand, within CA264_11190 at 2592.290 kb on - strand, within CA264_11190 at 2592.290 kb on - strand, within CA264_11190
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,589,535 + -1.0 2,589,536 - +2.1 2,589,590 + -0.8 2,589,677 + -0.6 2,589,678 - -0.1 2,589,711 - -0.6 2,589,779 - +0.1 2,589,779 - +0.4 2,589,823 - +0.2 2,589,829 - -0.7 2,589,895 + -0.2 2,589,896 - -0.7 2,589,897 + +0.0 2,589,919 - -1.5 2,589,919 - -1.1 2,589,927 + -0.2 2,589,927 + -1.5 2,589,928 - +1.3 2,589,928 - +0.7 2,589,928 - +0.2 2,589,930 + -0.8 2,589,930 + -3.2 2,589,931 - -0.0 2,589,937 + -0.6 2,589,937 + -0.3 2,589,937 + -0.1 2,589,937 + -1.4 2,589,938 - +1.2 2,589,938 - +0.3 2,589,938 - -1.4 2,589,943 - -2.4 2,589,943 - -0.7 2,589,968 - -0.2 2,590,065 + CA264_11180 0.17 -1.0 2,590,115 + CA264_11180 0.26 +0.1 2,590,115 + CA264_11180 0.26 -0.2 2,590,116 - CA264_11180 0.27 +0.9 2,590,119 + CA264_11180 0.27 +0.5 2,590,120 - CA264_11180 0.27 +0.8 2,590,120 - CA264_11180 0.27 +0.0 2,590,236 - CA264_11180 0.48 -0.4 2,590,236 - CA264_11180 0.48 +0.3 2,590,313 + CA264_11180 0.62 +0.8 2,590,327 + CA264_11180 0.64 -0.5 2,590,328 - CA264_11180 0.65 -1.1 2,590,328 - CA264_11180 0.65 -0.1 2,590,370 + CA264_11180 0.72 +1.3 2,590,371 - CA264_11180 0.72 -0.8 2,590,402 + CA264_11180 0.78 +0.4 2,590,418 - CA264_11180 0.81 +0.3 2,590,609 + CA264_11185 0.12 +0.4 2,590,619 + CA264_11185 0.14 -0.1 2,590,620 - CA264_11185 0.14 -0.6 2,590,620 - CA264_11185 0.14 -0.7 2,590,620 - CA264_11185 0.14 -1.1 2,590,621 + CA264_11185 0.14 +0.5 2,590,621 + CA264_11185 0.14 +0.1 2,590,621 + CA264_11185 0.14 -0.1 2,590,621 + CA264_11185 0.14 -1.3 2,590,621 + CA264_11185 0.14 -1.1 2,590,622 - CA264_11185 0.14 -0.8 2,590,641 + CA264_11185 0.16 +0.5 2,590,641 + CA264_11185 0.16 +1.0 2,590,641 + CA264_11185 0.16 +0.4 2,590,641 + CA264_11185 0.16 +0.8 2,590,641 + CA264_11185 0.16 +0.1 2,590,642 - CA264_11185 0.16 -0.3 2,590,645 + CA264_11185 0.17 -0.6 2,590,812 - CA264_11185 0.37 -0.4 2,590,861 + CA264_11185 0.42 +0.8 2,590,862 - CA264_11185 0.43 -0.2 2,590,862 - CA264_11185 0.43 +0.5 2,590,865 - CA264_11185 0.43 +0.3 2,590,865 - CA264_11185 0.43 +0.2 2,590,882 + CA264_11185 0.45 +0.6 2,590,904 - CA264_11185 0.48 +0.1 2,590,904 - CA264_11185 0.48 +0.1 2,590,969 + CA264_11185 0.55 -0.5 2,590,969 + CA264_11185 0.55 -0.2 2,590,969 + CA264_11185 0.55 +0.1 2,590,970 - CA264_11185 0.55 +0.1 2,590,970 - CA264_11185 0.55 -1.2 2,590,979 - CA264_11185 0.57 -0.4 2,591,039 + CA264_11185 0.64 +1.3 2,591,059 + CA264_11185 0.66 +0.2 2,591,098 + CA264_11185 0.71 +0.8 2,591,098 + CA264_11185 0.71 +0.4 2,591,098 + CA264_11185 0.71 +0.2 2,591,099 - CA264_11185 0.71 -0.3 2,591,099 - CA264_11185 0.71 +0.8 2,591,167 + CA264_11185 0.79 -0.0 2,591,168 - CA264_11185 0.79 +0.2 2,591,204 + CA264_11185 0.83 -0.7 2,591,206 + CA264_11185 0.84 +0.6 2,591,206 + CA264_11185 0.84 +0.6 2,591,244 - CA264_11185 0.88 +0.0 2,591,244 - CA264_11185 0.88 +2.1 2,591,283 - +0.8 2,591,328 + +0.6 2,591,334 - +0.0 2,591,395 + +0.3 2,591,468 - +0.0 2,591,468 - -0.4 2,591,503 + -0.0 2,591,514 + -0.8 2,591,514 + +0.4 2,591,528 - +0.3 2,591,528 - +0.4 2,591,531 - +0.7 2,591,548 - +1.1 2,591,585 + +0.3 2,591,675 + -0.1 2,591,772 + CA264_11190 0.11 +1.5 2,591,856 - CA264_11190 0.18 +0.3 2,591,868 - CA264_11190 0.19 +1.0 2,591,885 + CA264_11190 0.20 -0.3 2,591,886 - CA264_11190 0.20 +0.5 2,591,886 - CA264_11190 0.20 -0.3 2,591,997 + CA264_11190 0.29 +0.9 2,592,037 + CA264_11190 0.32 -1.4 2,592,039 + CA264_11190 0.32 +2.3 2,592,040 - CA264_11190 0.32 +0.1 2,592,045 + CA264_11190 0.33 -0.7 2,592,289 + CA264_11190 0.52 +1.3 2,592,289 + CA264_11190 0.52 -0.2 2,592,290 - CA264_11190 0.52 -0.4 2,592,290 - CA264_11190 0.52 -0.7
Or see this region's nucleotide sequence