Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09105 and CA264_09110 overlap by 4 nucleotides CA264_09110 and CA264_09115 are separated by 554 nucleotides
CA264_09105: CA264_09105 - amidohydrolase, at 2,132,096 to 2,133,358
_09105
CA264_09110: CA264_09110 - mechanosensitive ion channel protein MscS, at 2,133,355 to 2,134,275
_09110
CA264_09115: CA264_09115 - hypothetical protein, at 2,134,830 to 2,135,507
_09115
Position (kb)
2133
2134
2135 Strain fitness (log2 ratio)
-2
-1
0
1 at 2132.366 kb on + strand, within CA264_09105 at 2132.547 kb on + strand, within CA264_09105 at 2132.601 kb on - strand, within CA264_09105 at 2132.609 kb on - strand, within CA264_09105 at 2132.621 kb on + strand, within CA264_09105 at 2132.621 kb on + strand, within CA264_09105 at 2132.622 kb on - strand, within CA264_09105 at 2132.673 kb on + strand, within CA264_09105 at 2132.725 kb on - strand, within CA264_09105 at 2132.725 kb on - strand, within CA264_09105 at 2132.726 kb on + strand, within CA264_09105 at 2132.768 kb on - strand, within CA264_09105 at 2132.774 kb on - strand, within CA264_09105 at 2132.871 kb on + strand, within CA264_09105 at 2132.871 kb on + strand, within CA264_09105 at 2133.267 kb on + strand at 2133.401 kb on + strand at 2133.558 kb on - strand, within CA264_09110 at 2133.721 kb on + strand, within CA264_09110 at 2133.749 kb on + strand, within CA264_09110 at 2133.750 kb on - strand, within CA264_09110 at 2133.755 kb on + strand, within CA264_09110 at 2133.942 kb on + strand, within CA264_09110 at 2133.945 kb on + strand, within CA264_09110 at 2133.946 kb on - strand, within CA264_09110 at 2134.009 kb on + strand, within CA264_09110 at 2134.010 kb on - strand, within CA264_09110 at 2134.056 kb on - strand, within CA264_09110 at 2134.092 kb on - strand, within CA264_09110 at 2134.092 kb on - strand, within CA264_09110 at 2134.220 kb on + strand at 2134.221 kb on - strand at 2134.290 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.376 kb on + strand at 2134.386 kb on + strand at 2134.387 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.395 kb on + strand at 2134.395 kb on + strand at 2134.396 kb on - strand at 2134.419 kb on + strand at 2134.420 kb on - strand at 2134.537 kb on - strand at 2134.580 kb on + strand at 2134.581 kb on - strand at 2134.589 kb on + strand at 2134.727 kb on + strand at 2134.815 kb on + strand at 2134.843 kb on + strand at 2134.863 kb on - strand at 2134.871 kb on + strand at 2134.872 kb on - strand at 2134.896 kb on + strand at 2134.896 kb on + strand at 2134.897 kb on - strand at 2134.905 kb on + strand, within CA264_09115 at 2135.041 kb on - strand, within CA264_09115 at 2135.194 kb on + strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.253 kb on + strand, within CA264_09115 at 2135.254 kb on - strand, within CA264_09115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,132,366 + CA264_09105 0.21 -0.3 2,132,547 + CA264_09105 0.36 -1.1 2,132,601 - CA264_09105 0.40 -0.4 2,132,609 - CA264_09105 0.41 -0.2 2,132,621 + CA264_09105 0.42 -1.0 2,132,621 + CA264_09105 0.42 -0.4 2,132,622 - CA264_09105 0.42 +0.0 2,132,673 + CA264_09105 0.46 -0.7 2,132,725 - CA264_09105 0.50 -0.5 2,132,725 - CA264_09105 0.50 -0.4 2,132,726 + CA264_09105 0.50 -0.3 2,132,768 - CA264_09105 0.53 -0.3 2,132,774 - CA264_09105 0.54 +0.2 2,132,871 + CA264_09105 0.61 -0.2 2,132,871 + CA264_09105 0.61 +1.0 2,133,267 + -0.0 2,133,401 + -1.3 2,133,558 - CA264_09110 0.22 +0.2 2,133,721 + CA264_09110 0.40 -0.7 2,133,749 + CA264_09110 0.43 +1.7 2,133,750 - CA264_09110 0.43 -0.9 2,133,755 + CA264_09110 0.43 -1.0 2,133,942 + CA264_09110 0.64 -0.4 2,133,945 + CA264_09110 0.64 -1.9 2,133,946 - CA264_09110 0.64 -0.6 2,134,009 + CA264_09110 0.71 -1.0 2,134,010 - CA264_09110 0.71 -2.1 2,134,056 - CA264_09110 0.76 +1.0 2,134,092 - CA264_09110 0.80 -0.8 2,134,092 - CA264_09110 0.80 -0.0 2,134,220 + -0.4 2,134,221 - -0.1 2,134,290 - +0.5 2,134,368 - +1.5 2,134,368 - -1.0 2,134,368 - -0.5 2,134,368 - -0.2 2,134,368 - +0.4 2,134,376 + -1.3 2,134,386 + -1.5 2,134,387 - -0.5 2,134,391 - -0.2 2,134,391 - -0.5 2,134,391 - -0.7 2,134,391 - -0.1 2,134,391 - -0.0 2,134,395 + -1.3 2,134,395 + -0.7 2,134,396 - +0.5 2,134,419 + -0.9 2,134,420 - +0.0 2,134,537 - -0.0 2,134,580 + -0.6 2,134,581 - -0.0 2,134,589 + -0.1 2,134,727 + -0.2 2,134,815 + +0.4 2,134,843 + -0.5 2,134,863 - -0.2 2,134,871 + -0.1 2,134,872 - +0.2 2,134,896 + -0.5 2,134,896 + +0.3 2,134,897 - -0.9 2,134,905 + CA264_09115 0.11 -0.5 2,135,041 - CA264_09115 0.31 -1.1 2,135,194 + CA264_09115 0.54 +0.2 2,135,195 - CA264_09115 0.54 -0.5 2,135,195 - CA264_09115 0.54 -0.2 2,135,195 - CA264_09115 0.54 -0.9 2,135,253 + CA264_09115 0.62 -2.3 2,135,254 - CA264_09115 0.63 -0.3
Or see this region's nucleotide sequence