Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08895

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_08885 and CA264_08890 overlap by 34 nucleotidesCA264_08890 and CA264_08895 are separated by 8 nucleotidesCA264_08895 and CA264_08900 are separated by 211 nucleotides CA264_08885: CA264_08885 - hypothetical protein, at 2,074,921 to 2,075,862 _08885 CA264_08890: CA264_08890 - hypothetical protein, at 2,075,829 to 2,076,461 _08890 CA264_08895: CA264_08895 - hypothetical protein, at 2,076,470 to 2,076,946 _08895 CA264_08900: CA264_08900 - peptidase, at 2,077,158 to 2,079,602 _08900 Position (kb) 2076 2077Strain fitness (log2 ratio) -2 -1 0 1 2at 2075.545 kb on + strand, within CA264_08885at 2075.545 kb on + strand, within CA264_08885at 2075.546 kb on - strand, within CA264_08885at 2075.562 kb on + strand, within CA264_08885at 2075.563 kb on - strand, within CA264_08885at 2075.563 kb on - strand, within CA264_08885at 2075.567 kb on + strand, within CA264_08885at 2075.568 kb on - strand, within CA264_08885at 2075.583 kb on + strand, within CA264_08885at 2075.584 kb on - strand, within CA264_08885at 2075.681 kb on + strand, within CA264_08885at 2075.682 kb on - strand, within CA264_08885at 2075.759 kb on - strand, within CA264_08885at 2075.794 kb on - strandat 2075.794 kb on - strandat 2075.794 kb on - strandat 2075.862 kb on + strandat 2075.862 kb on + strandat 2075.905 kb on + strand, within CA264_08890at 2076.036 kb on + strand, within CA264_08890at 2076.037 kb on - strand, within CA264_08890at 2076.100 kb on + strand, within CA264_08890at 2076.131 kb on + strand, within CA264_08890at 2076.195 kb on - strand, within CA264_08890at 2076.220 kb on + strand, within CA264_08890at 2076.220 kb on + strand, within CA264_08890at 2076.221 kb on - strand, within CA264_08890at 2076.221 kb on - strand, within CA264_08890at 2076.286 kb on + strand, within CA264_08890at 2076.286 kb on + strand, within CA264_08890at 2076.287 kb on - strand, within CA264_08890at 2076.288 kb on + strand, within CA264_08890at 2076.289 kb on - strand, within CA264_08890at 2076.492 kb on + strandat 2076.493 kb on - strandat 2076.493 kb on - strandat 2076.493 kb on - strandat 2076.544 kb on + strand, within CA264_08895at 2076.545 kb on - strand, within CA264_08895at 2076.545 kb on - strand, within CA264_08895at 2076.545 kb on - strand, within CA264_08895at 2076.579 kb on - strand, within CA264_08895at 2076.579 kb on - strand, within CA264_08895at 2076.597 kb on + strand, within CA264_08895at 2076.598 kb on - strand, within CA264_08895at 2076.858 kb on + strand, within CA264_08895at 2076.859 kb on - strand, within CA264_08895at 2076.861 kb on + strand, within CA264_08895at 2076.902 kb on + strandat 2076.902 kb on + strandat 2076.902 kb on + strandat 2076.903 kb on - strandat 2076.904 kb on + strandat 2076.926 kb on + strandat 2076.951 kb on + strandat 2076.951 kb on + strandat 2076.952 kb on - strandat 2076.952 kb on - strandat 2076.952 kb on - strandat 2076.952 kb on - strandat 2076.965 kb on + strandat 2076.965 kb on + strandat 2076.976 kb on - strandat 2076.990 kb on - strandat 2077.035 kb on + strandat 2077.055 kb on - strandat 2077.055 kb on - strandat 2077.057 kb on - strandat 2077.057 kb on - strandat 2077.118 kb on + strandat 2077.124 kb on - strandat 2077.124 kb on - strandat 2077.124 kb on - strandat 2077.124 kb on - strandat 2077.144 kb on - strandat 2077.150 kb on - strandat 2077.154 kb on + strandat 2077.154 kb on + strandat 2077.154 kb on + strandat 2077.154 kb on + strandat 2077.296 kb on + strandat 2077.297 kb on - strandat 2077.300 kb on - strandat 2077.316 kb on + strandat 2077.317 kb on - strandat 2077.333 kb on + strandat 2077.338 kb on - strandat 2077.363 kb on + strandat 2077.440 kb on + strand, within CA264_08900at 2077.440 kb on + strand, within CA264_08900at 2077.440 kb on + strand, within CA264_08900at 2077.440 kb on + strand, within CA264_08900at 2077.441 kb on - strand, within CA264_08900at 2077.441 kb on - strand, within CA264_08900at 2077.446 kb on - strand, within CA264_08900at 2077.569 kb on - strand, within CA264_08900at 2077.637 kb on + strand, within CA264_08900at 2077.637 kb on + strand, within CA264_08900at 2077.679 kb on + strand, within CA264_08900at 2077.680 kb on - strand, within CA264_08900at 2077.680 kb on - strand, within CA264_08900at 2077.760 kb on + strand, within CA264_08900at 2077.761 kb on - strand, within CA264_08900at 2077.767 kb on - strand, within CA264_08900at 2077.796 kb on - strand, within CA264_08900at 2077.859 kb on - strand, within CA264_08900at 2077.865 kb on + strand, within CA264_08900at 2077.872 kb on + strand, within CA264_08900at 2077.873 kb on - strand, within CA264_08900at 2077.873 kb on - strand, within CA264_08900at 2077.873 kb on - strand, within CA264_08900at 2077.873 kb on - strand, within CA264_08900at 2077.873 kb on - strand, within CA264_08900at 2077.873 kb on - strand, within CA264_08900at 2077.874 kb on + strand, within CA264_08900at 2077.906 kb on - strand, within CA264_08900at 2077.921 kb on - strand, within CA264_08900

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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2,075,545 + CA264_08885 0.66 +0.4
2,075,545 + CA264_08885 0.66 +0.5
2,075,546 - CA264_08885 0.66 -0.2
2,075,562 + CA264_08885 0.68 +1.6
2,075,563 - CA264_08885 0.68 +0.4
2,075,563 - CA264_08885 0.68 +0.4
2,075,567 + CA264_08885 0.69 -2.2
2,075,568 - CA264_08885 0.69 -0.6
2,075,583 + CA264_08885 0.70 +0.8
2,075,584 - CA264_08885 0.70 +1.8
2,075,681 + CA264_08885 0.81 +0.7
2,075,682 - CA264_08885 0.81 -0.4
2,075,759 - CA264_08885 0.89 -1.2
2,075,794 - -0.2
2,075,794 - +0.5
2,075,794 - -0.1
2,075,862 + -0.7
2,075,862 + +0.4
2,075,905 + CA264_08890 0.12 -0.6
2,076,036 + CA264_08890 0.33 -0.2
2,076,037 - CA264_08890 0.33 -0.2
2,076,100 + CA264_08890 0.43 +0.1
2,076,131 + CA264_08890 0.48 +1.9
2,076,195 - CA264_08890 0.58 +0.3
2,076,220 + CA264_08890 0.62 +1.7
2,076,220 + CA264_08890 0.62 -0.3
2,076,221 - CA264_08890 0.62 -2.4
2,076,221 - CA264_08890 0.62 +0.2
2,076,286 + CA264_08890 0.72 +0.5
2,076,286 + CA264_08890 0.72 -0.5
2,076,287 - CA264_08890 0.72 -0.7
2,076,288 + CA264_08890 0.73 -0.2
2,076,289 - CA264_08890 0.73 +0.7
2,076,492 + -0.6
2,076,493 - -0.8
2,076,493 - +0.2
2,076,493 - -0.4
2,076,544 + CA264_08895 0.16 -0.3
2,076,545 - CA264_08895 0.16 +0.4
2,076,545 - CA264_08895 0.16 +0.6
2,076,545 - CA264_08895 0.16 +0.3
2,076,579 - CA264_08895 0.23 +0.3
2,076,579 - CA264_08895 0.23 -0.2
2,076,597 + CA264_08895 0.27 -1.0
2,076,598 - CA264_08895 0.27 -0.8
2,076,858 + CA264_08895 0.81 -0.6
2,076,859 - CA264_08895 0.82 -0.7
2,076,861 + CA264_08895 0.82 -0.2
2,076,902 + -0.5
2,076,902 + +0.2
2,076,902 + -0.1
2,076,903 - -0.8
2,076,904 + +1.0
2,076,926 + +1.1
2,076,951 + +0.1
2,076,951 + +0.7
2,076,952 - -0.2
2,076,952 - +0.2
2,076,952 - -0.9
2,076,952 - -0.1
2,076,965 + -0.6
2,076,965 + +2.0
2,076,976 - -1.5
2,076,990 - +0.4
2,077,035 + +1.7
2,077,055 - -0.1
2,077,055 - +0.1
2,077,057 - -0.0
2,077,057 - -0.0
2,077,118 + -0.5
2,077,124 - -0.6
2,077,124 - -1.6
2,077,124 - +0.6
2,077,124 - -0.2
2,077,144 - -0.3
2,077,150 - -0.4
2,077,154 + -0.2
2,077,154 + -0.5
2,077,154 + -2.0
2,077,154 + +2.0
2,077,296 + -0.3
2,077,297 - +0.2
2,077,300 - +0.3
2,077,316 + +0.8
2,077,317 - +0.2
2,077,333 + +1.0
2,077,338 - +0.4
2,077,363 + +0.1
2,077,440 + CA264_08900 0.12 -0.1
2,077,440 + CA264_08900 0.12 +0.2
2,077,440 + CA264_08900 0.12 +0.5
2,077,440 + CA264_08900 0.12 +0.3
2,077,441 - CA264_08900 0.12 -0.0
2,077,441 - CA264_08900 0.12 -1.1
2,077,446 - CA264_08900 0.12 -1.1
2,077,569 - CA264_08900 0.17 -0.2
2,077,637 + CA264_08900 0.20 -0.0
2,077,637 + CA264_08900 0.20 +0.1
2,077,679 + CA264_08900 0.21 -0.3
2,077,680 - CA264_08900 0.21 -0.4
2,077,680 - CA264_08900 0.21 +0.6
2,077,760 + CA264_08900 0.25 -0.1
2,077,761 - CA264_08900 0.25 -1.2
2,077,767 - CA264_08900 0.25 +0.7
2,077,796 - CA264_08900 0.26 -0.2
2,077,859 - CA264_08900 0.29 +0.5
2,077,865 + CA264_08900 0.29 -0.4
2,077,872 + CA264_08900 0.29 -1.3
2,077,873 - CA264_08900 0.29 +0.4
2,077,873 - CA264_08900 0.29 -0.1
2,077,873 - CA264_08900 0.29 -0.0
2,077,873 - CA264_08900 0.29 -1.3
2,077,873 - CA264_08900 0.29 -1.4
2,077,873 - CA264_08900 0.29 -0.5
2,077,874 + CA264_08900 0.29 +0.4
2,077,906 - CA264_08900 0.31 +1.1
2,077,921 - CA264_08900 0.31 +0.4

Or see this region's nucleotide sequence