Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08885 and CA264_08890 overlap by 34 nucleotides CA264_08890 and CA264_08895 are separated by 8 nucleotides CA264_08895 and CA264_08900 are separated by 211 nucleotides
CA264_08885: CA264_08885 - hypothetical protein, at 2,074,921 to 2,075,862
_08885
CA264_08890: CA264_08890 - hypothetical protein, at 2,075,829 to 2,076,461
_08890
CA264_08895: CA264_08895 - hypothetical protein, at 2,076,470 to 2,076,946
_08895
CA264_08900: CA264_08900 - peptidase, at 2,077,158 to 2,079,602
_08900
Position (kb)
2076
2077 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2075.545 kb on + strand, within CA264_08885 at 2075.545 kb on + strand, within CA264_08885 at 2075.546 kb on - strand, within CA264_08885 at 2075.562 kb on + strand, within CA264_08885 at 2075.563 kb on - strand, within CA264_08885 at 2075.563 kb on - strand, within CA264_08885 at 2075.567 kb on + strand, within CA264_08885 at 2075.568 kb on - strand, within CA264_08885 at 2075.583 kb on + strand, within CA264_08885 at 2075.584 kb on - strand, within CA264_08885 at 2075.681 kb on + strand, within CA264_08885 at 2075.682 kb on - strand, within CA264_08885 at 2075.759 kb on - strand, within CA264_08885 at 2075.794 kb on - strand at 2075.794 kb on - strand at 2075.794 kb on - strand at 2075.862 kb on + strand at 2075.862 kb on + strand at 2075.905 kb on + strand, within CA264_08890 at 2076.036 kb on + strand, within CA264_08890 at 2076.037 kb on - strand, within CA264_08890 at 2076.100 kb on + strand, within CA264_08890 at 2076.131 kb on + strand, within CA264_08890 at 2076.195 kb on - strand, within CA264_08890 at 2076.220 kb on + strand, within CA264_08890 at 2076.220 kb on + strand, within CA264_08890 at 2076.221 kb on - strand, within CA264_08890 at 2076.221 kb on - strand, within CA264_08890 at 2076.286 kb on + strand, within CA264_08890 at 2076.286 kb on + strand, within CA264_08890 at 2076.287 kb on - strand, within CA264_08890 at 2076.288 kb on + strand, within CA264_08890 at 2076.289 kb on - strand, within CA264_08890 at 2076.492 kb on + strand at 2076.493 kb on - strand at 2076.493 kb on - strand at 2076.493 kb on - strand at 2076.544 kb on + strand, within CA264_08895 at 2076.545 kb on - strand, within CA264_08895 at 2076.545 kb on - strand, within CA264_08895 at 2076.545 kb on - strand, within CA264_08895 at 2076.579 kb on - strand, within CA264_08895 at 2076.579 kb on - strand, within CA264_08895 at 2076.597 kb on + strand, within CA264_08895 at 2076.598 kb on - strand, within CA264_08895 at 2076.858 kb on + strand, within CA264_08895 at 2076.859 kb on - strand, within CA264_08895 at 2076.861 kb on + strand, within CA264_08895 at 2076.902 kb on + strand at 2076.902 kb on + strand at 2076.902 kb on + strand at 2076.903 kb on - strand at 2076.904 kb on + strand at 2076.926 kb on + strand at 2076.951 kb on + strand at 2076.951 kb on + strand at 2076.952 kb on - strand at 2076.952 kb on - strand at 2076.952 kb on - strand at 2076.952 kb on - strand at 2076.965 kb on + strand at 2076.965 kb on + strand at 2076.976 kb on - strand at 2076.990 kb on - strand at 2077.035 kb on + strand at 2077.055 kb on - strand at 2077.055 kb on - strand at 2077.057 kb on - strand at 2077.057 kb on - strand at 2077.118 kb on + strand at 2077.124 kb on - strand at 2077.124 kb on - strand at 2077.124 kb on - strand at 2077.124 kb on - strand at 2077.144 kb on - strand at 2077.150 kb on - strand at 2077.154 kb on + strand at 2077.154 kb on + strand at 2077.154 kb on + strand at 2077.154 kb on + strand at 2077.296 kb on + strand at 2077.297 kb on - strand at 2077.300 kb on - strand at 2077.316 kb on + strand at 2077.317 kb on - strand at 2077.333 kb on + strand at 2077.338 kb on - strand at 2077.363 kb on + strand at 2077.440 kb on + strand, within CA264_08900 at 2077.440 kb on + strand, within CA264_08900 at 2077.440 kb on + strand, within CA264_08900 at 2077.440 kb on + strand, within CA264_08900 at 2077.441 kb on - strand, within CA264_08900 at 2077.441 kb on - strand, within CA264_08900 at 2077.446 kb on - strand, within CA264_08900 at 2077.569 kb on - strand, within CA264_08900 at 2077.637 kb on + strand, within CA264_08900 at 2077.637 kb on + strand, within CA264_08900 at 2077.679 kb on + strand, within CA264_08900 at 2077.680 kb on - strand, within CA264_08900 at 2077.680 kb on - strand, within CA264_08900 at 2077.760 kb on + strand, within CA264_08900 at 2077.761 kb on - strand, within CA264_08900 at 2077.767 kb on - strand, within CA264_08900 at 2077.796 kb on - strand, within CA264_08900 at 2077.859 kb on - strand, within CA264_08900 at 2077.865 kb on + strand, within CA264_08900 at 2077.872 kb on + strand, within CA264_08900 at 2077.873 kb on - strand, within CA264_08900 at 2077.873 kb on - strand, within CA264_08900 at 2077.873 kb on - strand, within CA264_08900 at 2077.873 kb on - strand, within CA264_08900 at 2077.873 kb on - strand, within CA264_08900 at 2077.873 kb on - strand, within CA264_08900 at 2077.874 kb on + strand, within CA264_08900 at 2077.906 kb on - strand, within CA264_08900 at 2077.921 kb on - strand, within CA264_08900
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,075,545 + CA264_08885 0.66 +0.4 2,075,545 + CA264_08885 0.66 +0.5 2,075,546 - CA264_08885 0.66 -0.2 2,075,562 + CA264_08885 0.68 +1.6 2,075,563 - CA264_08885 0.68 +0.4 2,075,563 - CA264_08885 0.68 +0.4 2,075,567 + CA264_08885 0.69 -2.2 2,075,568 - CA264_08885 0.69 -0.6 2,075,583 + CA264_08885 0.70 +0.8 2,075,584 - CA264_08885 0.70 +1.8 2,075,681 + CA264_08885 0.81 +0.7 2,075,682 - CA264_08885 0.81 -0.4 2,075,759 - CA264_08885 0.89 -1.2 2,075,794 - -0.2 2,075,794 - +0.5 2,075,794 - -0.1 2,075,862 + -0.7 2,075,862 + +0.4 2,075,905 + CA264_08890 0.12 -0.6 2,076,036 + CA264_08890 0.33 -0.2 2,076,037 - CA264_08890 0.33 -0.2 2,076,100 + CA264_08890 0.43 +0.1 2,076,131 + CA264_08890 0.48 +1.9 2,076,195 - CA264_08890 0.58 +0.3 2,076,220 + CA264_08890 0.62 +1.7 2,076,220 + CA264_08890 0.62 -0.3 2,076,221 - CA264_08890 0.62 -2.4 2,076,221 - CA264_08890 0.62 +0.2 2,076,286 + CA264_08890 0.72 +0.5 2,076,286 + CA264_08890 0.72 -0.5 2,076,287 - CA264_08890 0.72 -0.7 2,076,288 + CA264_08890 0.73 -0.2 2,076,289 - CA264_08890 0.73 +0.7 2,076,492 + -0.6 2,076,493 - -0.8 2,076,493 - +0.2 2,076,493 - -0.4 2,076,544 + CA264_08895 0.16 -0.3 2,076,545 - CA264_08895 0.16 +0.4 2,076,545 - CA264_08895 0.16 +0.6 2,076,545 - CA264_08895 0.16 +0.3 2,076,579 - CA264_08895 0.23 +0.3 2,076,579 - CA264_08895 0.23 -0.2 2,076,597 + CA264_08895 0.27 -1.0 2,076,598 - CA264_08895 0.27 -0.8 2,076,858 + CA264_08895 0.81 -0.6 2,076,859 - CA264_08895 0.82 -0.7 2,076,861 + CA264_08895 0.82 -0.2 2,076,902 + -0.5 2,076,902 + +0.2 2,076,902 + -0.1 2,076,903 - -0.8 2,076,904 + +1.0 2,076,926 + +1.1 2,076,951 + +0.1 2,076,951 + +0.7 2,076,952 - -0.2 2,076,952 - +0.2 2,076,952 - -0.9 2,076,952 - -0.1 2,076,965 + -0.6 2,076,965 + +2.0 2,076,976 - -1.5 2,076,990 - +0.4 2,077,035 + +1.7 2,077,055 - -0.1 2,077,055 - +0.1 2,077,057 - -0.0 2,077,057 - -0.0 2,077,118 + -0.5 2,077,124 - -0.6 2,077,124 - -1.6 2,077,124 - +0.6 2,077,124 - -0.2 2,077,144 - -0.3 2,077,150 - -0.4 2,077,154 + -0.2 2,077,154 + -0.5 2,077,154 + -2.0 2,077,154 + +2.0 2,077,296 + -0.3 2,077,297 - +0.2 2,077,300 - +0.3 2,077,316 + +0.8 2,077,317 - +0.2 2,077,333 + +1.0 2,077,338 - +0.4 2,077,363 + +0.1 2,077,440 + CA264_08900 0.12 -0.1 2,077,440 + CA264_08900 0.12 +0.2 2,077,440 + CA264_08900 0.12 +0.5 2,077,440 + CA264_08900 0.12 +0.3 2,077,441 - CA264_08900 0.12 -0.0 2,077,441 - CA264_08900 0.12 -1.1 2,077,446 - CA264_08900 0.12 -1.1 2,077,569 - CA264_08900 0.17 -0.2 2,077,637 + CA264_08900 0.20 -0.0 2,077,637 + CA264_08900 0.20 +0.1 2,077,679 + CA264_08900 0.21 -0.3 2,077,680 - CA264_08900 0.21 -0.4 2,077,680 - CA264_08900 0.21 +0.6 2,077,760 + CA264_08900 0.25 -0.1 2,077,761 - CA264_08900 0.25 -1.2 2,077,767 - CA264_08900 0.25 +0.7 2,077,796 - CA264_08900 0.26 -0.2 2,077,859 - CA264_08900 0.29 +0.5 2,077,865 + CA264_08900 0.29 -0.4 2,077,872 + CA264_08900 0.29 -1.3 2,077,873 - CA264_08900 0.29 +0.4 2,077,873 - CA264_08900 0.29 -0.1 2,077,873 - CA264_08900 0.29 -0.0 2,077,873 - CA264_08900 0.29 -1.3 2,077,873 - CA264_08900 0.29 -1.4 2,077,873 - CA264_08900 0.29 -0.5 2,077,874 + CA264_08900 0.29 +0.4 2,077,906 - CA264_08900 0.31 +1.1 2,077,921 - CA264_08900 0.31 +0.4
Or see this region's nucleotide sequence