Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08855 and CA264_08860 are separated by 59 nucleotides CA264_08860 and CA264_08865 are separated by 74 nucleotides CA264_08865 and CA264_08870 are separated by 37 nucleotides
CA264_08855: CA264_08855 - DUF1835 domain-containing protein, at 2,068,206 to 2,069,123
_08855
CA264_08860: CA264_08860 - hypothetical protein, at 2,069,183 to 2,069,584
_08860
CA264_08865: CA264_08865 - formimidoylglutamase, at 2,069,659 to 2,070,633
_08865
CA264_08870: CA264_08870 - imidazolonepropionase, at 2,070,671 to 2,071,924
_08870
Position (kb)
2069
2070
2071 Strain fitness (log2 ratio)
-2
-1
0
1 at 2068.686 kb on + strand, within CA264_08855 at 2068.687 kb on - strand, within CA264_08855 at 2068.719 kb on + strand, within CA264_08855 at 2068.877 kb on + strand, within CA264_08855 at 2068.878 kb on - strand, within CA264_08855 at 2068.909 kb on - strand, within CA264_08855 at 2068.925 kb on - strand, within CA264_08855 at 2068.925 kb on - strand, within CA264_08855 at 2068.925 kb on - strand, within CA264_08855 at 2068.925 kb on - strand, within CA264_08855 at 2068.985 kb on + strand, within CA264_08855 at 2068.985 kb on + strand, within CA264_08855 at 2069.028 kb on - strand, within CA264_08855 at 2069.034 kb on - strand at 2069.149 kb on - strand at 2069.159 kb on + strand at 2069.160 kb on - strand at 2069.160 kb on - strand at 2069.160 kb on - strand at 2069.165 kb on + strand at 2069.170 kb on + strand at 2069.204 kb on + strand at 2069.204 kb on + strand at 2069.205 kb on - strand at 2069.211 kb on + strand at 2069.212 kb on - strand at 2069.290 kb on + strand, within CA264_08860 at 2069.291 kb on - strand, within CA264_08860 at 2069.324 kb on - strand, within CA264_08860 at 2069.372 kb on + strand, within CA264_08860 at 2069.372 kb on + strand, within CA264_08860 at 2069.372 kb on + strand, within CA264_08860 at 2069.372 kb on + strand, within CA264_08860 at 2069.373 kb on - strand, within CA264_08860 at 2069.556 kb on - strand at 2069.592 kb on + strand at 2069.595 kb on - strand at 2069.640 kb on - strand at 2069.657 kb on - strand at 2069.662 kb on + strand at 2069.662 kb on + strand at 2069.691 kb on - strand at 2069.883 kb on + strand, within CA264_08865 at 2069.897 kb on + strand, within CA264_08865 at 2069.897 kb on + strand, within CA264_08865 at 2069.897 kb on + strand, within CA264_08865 at 2069.898 kb on - strand, within CA264_08865 at 2069.898 kb on - strand, within CA264_08865 at 2069.900 kb on - strand, within CA264_08865 at 2069.900 kb on - strand, within CA264_08865 at 2069.900 kb on - strand, within CA264_08865 at 2069.941 kb on + strand, within CA264_08865 at 2069.941 kb on + strand, within CA264_08865 at 2069.942 kb on - strand, within CA264_08865 at 2069.984 kb on + strand, within CA264_08865 at 2070.137 kb on + strand, within CA264_08865 at 2070.225 kb on - strand, within CA264_08865 at 2070.357 kb on - strand, within CA264_08865 at 2070.520 kb on + strand, within CA264_08865 at 2070.521 kb on - strand, within CA264_08865 at 2070.592 kb on + strand at 2070.593 kb on - strand at 2070.593 kb on - strand at 2070.593 kb on - strand at 2070.597 kb on + strand at 2070.598 kb on - strand at 2070.628 kb on - strand at 2070.628 kb on - strand at 2070.630 kb on - strand at 2070.630 kb on - strand at 2070.630 kb on - strand at 2070.633 kb on + strand at 2070.633 kb on + strand at 2070.633 kb on + strand at 2070.634 kb on - strand at 2070.666 kb on - strand at 2070.745 kb on + strand at 2070.751 kb on + strand at 2070.997 kb on - strand, within CA264_08870 at 2071.067 kb on + strand, within CA264_08870 at 2071.068 kb on - strand, within CA264_08870 at 2071.147 kb on + strand, within CA264_08870 at 2071.292 kb on + strand, within CA264_08870 at 2071.317 kb on + strand, within CA264_08870 at 2071.320 kb on - strand, within CA264_08870 at 2071.532 kb on + strand, within CA264_08870 at 2071.532 kb on + strand, within CA264_08870 at 2071.572 kb on - strand, within CA264_08870 at 2071.599 kb on - strand, within CA264_08870 at 2071.599 kb on - strand, within CA264_08870
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,068,686 + CA264_08855 0.52 -1.1 2,068,687 - CA264_08855 0.52 -0.1 2,068,719 + CA264_08855 0.56 +0.0 2,068,877 + CA264_08855 0.73 -0.2 2,068,878 - CA264_08855 0.73 -1.0 2,068,909 - CA264_08855 0.77 -0.4 2,068,925 - CA264_08855 0.78 +0.5 2,068,925 - CA264_08855 0.78 -0.8 2,068,925 - CA264_08855 0.78 +0.2 2,068,925 - CA264_08855 0.78 +0.4 2,068,985 + CA264_08855 0.85 -0.0 2,068,985 + CA264_08855 0.85 -0.2 2,069,028 - CA264_08855 0.90 -1.2 2,069,034 - -0.5 2,069,149 - -1.0 2,069,159 + +0.8 2,069,160 - -0.3 2,069,160 - -1.6 2,069,160 - -0.7 2,069,165 + -0.4 2,069,170 + +0.4 2,069,204 + -0.8 2,069,204 + -0.5 2,069,205 - -1.2 2,069,211 + -0.2 2,069,212 - -0.3 2,069,290 + CA264_08860 0.27 -0.3 2,069,291 - CA264_08860 0.27 +0.3 2,069,324 - CA264_08860 0.35 -0.6 2,069,372 + CA264_08860 0.47 -0.2 2,069,372 + CA264_08860 0.47 -0.0 2,069,372 + CA264_08860 0.47 -1.6 2,069,372 + CA264_08860 0.47 -0.3 2,069,373 - CA264_08860 0.47 +0.1 2,069,556 - +0.1 2,069,592 + -1.0 2,069,595 - +0.6 2,069,640 - -0.2 2,069,657 - -1.0 2,069,662 + -0.5 2,069,662 + +0.2 2,069,691 - -0.1 2,069,883 + CA264_08865 0.23 -0.2 2,069,897 + CA264_08865 0.24 -0.0 2,069,897 + CA264_08865 0.24 +0.3 2,069,897 + CA264_08865 0.24 +0.3 2,069,898 - CA264_08865 0.25 -0.0 2,069,898 - CA264_08865 0.25 -0.4 2,069,900 - CA264_08865 0.25 -0.0 2,069,900 - CA264_08865 0.25 +0.2 2,069,900 - CA264_08865 0.25 +0.2 2,069,941 + CA264_08865 0.29 +0.7 2,069,941 + CA264_08865 0.29 -1.5 2,069,942 - CA264_08865 0.29 -0.7 2,069,984 + CA264_08865 0.33 -0.7 2,070,137 + CA264_08865 0.49 -0.2 2,070,225 - CA264_08865 0.58 +0.5 2,070,357 - CA264_08865 0.72 +1.3 2,070,520 + CA264_08865 0.88 +0.2 2,070,521 - CA264_08865 0.88 +0.0 2,070,592 + -0.0 2,070,593 - -1.0 2,070,593 - +0.6 2,070,593 - +0.1 2,070,597 + +0.9 2,070,598 - -0.0 2,070,628 - +0.0 2,070,628 - -0.0 2,070,630 - -0.6 2,070,630 - +0.2 2,070,630 - -0.6 2,070,633 + -0.6 2,070,633 + +1.3 2,070,633 + +0.0 2,070,634 - -0.7 2,070,666 - -0.2 2,070,745 + -1.6 2,070,751 + -1.9 2,070,997 - CA264_08870 0.26 +0.5 2,071,067 + CA264_08870 0.32 -1.4 2,071,068 - CA264_08870 0.32 -1.6 2,071,147 + CA264_08870 0.38 +1.3 2,071,292 + CA264_08870 0.50 -2.1 2,071,317 + CA264_08870 0.52 -0.0 2,071,320 - CA264_08870 0.52 +0.0 2,071,532 + CA264_08870 0.69 +0.2 2,071,532 + CA264_08870 0.69 -1.1 2,071,572 - CA264_08870 0.72 -0.6 2,071,599 - CA264_08870 0.74 -0.5 2,071,599 - CA264_08870 0.74 -0.9
Or see this region's nucleotide sequence