Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08775 and CA264_08780 are separated by 70 nucleotides CA264_08780 and CA264_08785 are separated by 113 nucleotides CA264_08785 and CA264_08790 are separated by 7 nucleotides CA264_08790 and CA264_08795 overlap by 4 nucleotides
CA264_08775: CA264_08775 - ZIP family metal transporter, at 2,049,662 to 2,050,486
_08775
CA264_08780: CA264_08780 - hypothetical protein, at 2,050,557 to 2,051,318
_08780
CA264_08785: CA264_08785 - hypothetical protein, at 2,051,432 to 2,052,622
_08785
CA264_08790: CA264_08790 - LamB/YcsF family protein, at 2,052,630 to 2,053,391
_08790
CA264_08795: CA264_08795 - KipI antagonist, at 2,053,388 to 2,054,401
_08795
Position (kb)
2051
2052
2053 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2050.443 kb on + strand at 2050.486 kb on + strand at 2050.486 kb on + strand at 2050.487 kb on - strand at 2050.487 kb on - strand at 2050.588 kb on + strand at 2050.588 kb on + strand at 2050.661 kb on + strand, within CA264_08780 at 2050.666 kb on + strand, within CA264_08780 at 2050.709 kb on + strand, within CA264_08780 at 2050.709 kb on + strand, within CA264_08780 at 2050.709 kb on + strand, within CA264_08780 at 2050.709 kb on + strand, within CA264_08780 at 2050.710 kb on - strand, within CA264_08780 at 2050.710 kb on - strand, within CA264_08780 at 2050.710 kb on - strand, within CA264_08780 at 2050.710 kb on - strand, within CA264_08780 at 2050.713 kb on + strand, within CA264_08780 at 2050.779 kb on - strand, within CA264_08780 at 2050.844 kb on + strand, within CA264_08780 at 2050.887 kb on + strand, within CA264_08780 at 2050.932 kb on + strand, within CA264_08780 at 2050.945 kb on + strand, within CA264_08780 at 2051.072 kb on + strand, within CA264_08780 at 2051.073 kb on - strand, within CA264_08780 at 2051.083 kb on + strand, within CA264_08780 at 2051.178 kb on + strand, within CA264_08780 at 2051.178 kb on + strand, within CA264_08780 at 2051.187 kb on + strand, within CA264_08780 at 2051.187 kb on + strand, within CA264_08780 at 2051.187 kb on + strand, within CA264_08780 at 2051.187 kb on + strand, within CA264_08780 at 2051.188 kb on - strand, within CA264_08780 at 2051.188 kb on - strand, within CA264_08780 at 2051.188 kb on - strand, within CA264_08780 at 2051.190 kb on - strand, within CA264_08780 at 2051.228 kb on + strand, within CA264_08780 at 2051.229 kb on - strand, within CA264_08780 at 2051.229 kb on - strand, within CA264_08780 at 2051.313 kb on + strand at 2051.314 kb on - strand at 2051.318 kb on + strand at 2051.318 kb on + strand at 2051.425 kb on + strand at 2051.484 kb on + strand at 2051.484 kb on + strand at 2051.485 kb on - strand at 2051.542 kb on - strand at 2051.566 kb on - strand, within CA264_08785 at 2051.574 kb on + strand, within CA264_08785 at 2051.631 kb on - strand, within CA264_08785 at 2051.631 kb on - strand, within CA264_08785 at 2051.631 kb on - strand, within CA264_08785 at 2051.632 kb on + strand, within CA264_08785 at 2051.633 kb on - strand, within CA264_08785 at 2051.633 kb on - strand, within CA264_08785 at 2051.669 kb on - strand, within CA264_08785 at 2051.687 kb on - strand, within CA264_08785 at 2051.699 kb on - strand, within CA264_08785 at 2051.821 kb on - strand, within CA264_08785 at 2051.933 kb on - strand, within CA264_08785 at 2052.129 kb on - strand, within CA264_08785 at 2052.146 kb on - strand, within CA264_08785 at 2052.273 kb on - strand, within CA264_08785 at 2052.301 kb on + strand, within CA264_08785 at 2052.332 kb on + strand, within CA264_08785 at 2052.333 kb on - strand, within CA264_08785 at 2052.333 kb on - strand, within CA264_08785 at 2052.334 kb on + strand, within CA264_08785 at 2052.337 kb on + strand, within CA264_08785 at 2052.409 kb on + strand, within CA264_08785 at 2052.450 kb on - strand, within CA264_08785 at 2052.456 kb on - strand, within CA264_08785 at 2052.481 kb on + strand, within CA264_08785 at 2052.739 kb on - strand, within CA264_08790 at 2052.823 kb on - strand, within CA264_08790 at 2052.878 kb on + strand, within CA264_08790 at 2052.879 kb on - strand, within CA264_08790 at 2052.879 kb on - strand, within CA264_08790 at 2052.879 kb on - strand, within CA264_08790 at 2052.958 kb on + strand, within CA264_08790 at 2052.963 kb on + strand, within CA264_08790 at 2052.963 kb on + strand, within CA264_08790 at 2052.965 kb on + strand, within CA264_08790 at 2052.965 kb on + strand, within CA264_08790 at 2052.965 kb on + strand, within CA264_08790 at 2052.978 kb on + strand, within CA264_08790 at 2052.979 kb on - strand, within CA264_08790 at 2052.979 kb on - strand, within CA264_08790 at 2053.040 kb on - strand, within CA264_08790 at 2053.118 kb on - strand, within CA264_08790 at 2053.132 kb on + strand, within CA264_08790 at 2053.132 kb on + strand, within CA264_08790 at 2053.133 kb on - strand, within CA264_08790 at 2053.273 kb on + strand, within CA264_08790 at 2053.274 kb on - strand, within CA264_08790 at 2053.298 kb on + strand, within CA264_08790 at 2053.298 kb on + strand, within CA264_08790 at 2053.401 kb on - strand at 2053.401 kb on - strand at 2053.453 kb on - strand at 2053.457 kb on + strand at 2053.458 kb on - strand at 2053.458 kb on - strand at 2053.458 kb on - strand at 2053.595 kb on - strand, within CA264_08795
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 2,050,443 + -0.6 2,050,486 + +1.5 2,050,486 + +0.6 2,050,487 - +0.4 2,050,487 - -0.1 2,050,588 + -0.0 2,050,588 + -0.1 2,050,661 + CA264_08780 0.14 +0.7 2,050,666 + CA264_08780 0.14 +0.3 2,050,709 + CA264_08780 0.20 +0.6 2,050,709 + CA264_08780 0.20 +0.9 2,050,709 + CA264_08780 0.20 +1.8 2,050,709 + CA264_08780 0.20 +0.6 2,050,710 - CA264_08780 0.20 +0.3 2,050,710 - CA264_08780 0.20 +1.2 2,050,710 - CA264_08780 0.20 +1.2 2,050,710 - CA264_08780 0.20 +0.5 2,050,713 + CA264_08780 0.20 -0.5 2,050,779 - CA264_08780 0.29 +0.3 2,050,844 + CA264_08780 0.38 +3.0 2,050,887 + CA264_08780 0.43 +1.0 2,050,932 + CA264_08780 0.49 +1.4 2,050,945 + CA264_08780 0.51 +0.0 2,051,072 + CA264_08780 0.68 +0.5 2,051,073 - CA264_08780 0.68 -0.0 2,051,083 + CA264_08780 0.69 +2.3 2,051,178 + CA264_08780 0.81 +1.1 2,051,178 + CA264_08780 0.81 +0.7 2,051,187 + CA264_08780 0.83 +0.3 2,051,187 + CA264_08780 0.83 -1.0 2,051,187 + CA264_08780 0.83 -0.1 2,051,187 + CA264_08780 0.83 -0.0 2,051,188 - CA264_08780 0.83 +0.7 2,051,188 - CA264_08780 0.83 +0.5 2,051,188 - CA264_08780 0.83 +0.5 2,051,190 - CA264_08780 0.83 +0.5 2,051,228 + CA264_08780 0.88 -1.3 2,051,229 - CA264_08780 0.88 +0.1 2,051,229 - CA264_08780 0.88 +0.8 2,051,313 + +0.2 2,051,314 - -0.0 2,051,318 + +0.3 2,051,318 + +0.6 2,051,425 + -1.3 2,051,484 + -0.4 2,051,484 + +0.6 2,051,485 - +1.1 2,051,542 - +0.1 2,051,566 - CA264_08785 0.11 +0.5 2,051,574 + CA264_08785 0.12 -0.2 2,051,631 - CA264_08785 0.17 +1.1 2,051,631 - CA264_08785 0.17 +1.2 2,051,631 - CA264_08785 0.17 -0.2 2,051,632 + CA264_08785 0.17 +1.1 2,051,633 - CA264_08785 0.17 +0.1 2,051,633 - CA264_08785 0.17 +0.5 2,051,669 - CA264_08785 0.20 +1.0 2,051,687 - CA264_08785 0.21 +0.4 2,051,699 - CA264_08785 0.22 +0.3 2,051,821 - CA264_08785 0.33 +0.0 2,051,933 - CA264_08785 0.42 -0.4 2,052,129 - CA264_08785 0.59 -0.4 2,052,146 - CA264_08785 0.60 -0.2 2,052,273 - CA264_08785 0.71 -0.0 2,052,301 + CA264_08785 0.73 +0.2 2,052,332 + CA264_08785 0.76 +0.1 2,052,333 - CA264_08785 0.76 +0.3 2,052,333 - CA264_08785 0.76 -0.4 2,052,334 + CA264_08785 0.76 +0.1 2,052,337 + CA264_08785 0.76 +0.2 2,052,409 + CA264_08785 0.82 +0.2 2,052,450 - CA264_08785 0.85 +0.0 2,052,456 - CA264_08785 0.86 -0.9 2,052,481 + CA264_08785 0.88 +0.7 2,052,739 - CA264_08790 0.14 +1.3 2,052,823 - CA264_08790 0.25 +2.5 2,052,878 + CA264_08790 0.33 -1.5 2,052,879 - CA264_08790 0.33 -0.2 2,052,879 - CA264_08790 0.33 +0.3 2,052,879 - CA264_08790 0.33 +0.4 2,052,958 + CA264_08790 0.43 -0.3 2,052,963 + CA264_08790 0.44 -1.4 2,052,963 + CA264_08790 0.44 -0.5 2,052,965 + CA264_08790 0.44 +0.7 2,052,965 + CA264_08790 0.44 -0.3 2,052,965 + CA264_08790 0.44 -0.5 2,052,978 + CA264_08790 0.46 -0.3 2,052,979 - CA264_08790 0.46 +0.7 2,052,979 - CA264_08790 0.46 +0.3 2,053,040 - CA264_08790 0.54 -0.0 2,053,118 - CA264_08790 0.64 -1.2 2,053,132 + CA264_08790 0.66 -0.4 2,053,132 + CA264_08790 0.66 -0.5 2,053,133 - CA264_08790 0.66 +0.1 2,053,273 + CA264_08790 0.84 -1.2 2,053,274 - CA264_08790 0.85 -0.4 2,053,298 + CA264_08790 0.88 -1.0 2,053,298 + CA264_08790 0.88 -0.6 2,053,401 - +0.4 2,053,401 - +0.6 2,053,453 - -0.8 2,053,457 + +0.2 2,053,458 - -0.8 2,053,458 - +0.1 2,053,458 - -0.4 2,053,595 - CA264_08795 0.20 -0.0
Or see this region's nucleotide sequence