Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07455 and CA264_07460 are separated by 445 nucleotides CA264_07460 and CA264_07465 are separated by 44 nucleotides CA264_07465 and CA264_07470 are separated by 456 nucleotides
CA264_07455: CA264_07455 - hydrolase, at 1,724,632 to 1,725,408
_07455
CA264_07460: CA264_07460 - hypothetical protein, at 1,725,854 to 1,728,571
_07460
CA264_07465: CA264_07465 - hypothetical protein, at 1,728,616 to 1,728,801
_07465
CA264_07470: CA264_07470 - glucose-6-phosphate isomerase, at 1,729,258 to 1,730,904
_07470
Position (kb)
1725
1726
1727
1728
1729 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1725.212 kb on + strand, within CA264_07455 at 1725.213 kb on - strand, within CA264_07455 at 1725.394 kb on - strand at 1725.475 kb on + strand at 1725.476 kb on - strand at 1725.509 kb on + strand at 1725.555 kb on + strand at 1725.557 kb on + strand at 1725.558 kb on - strand at 1725.607 kb on - strand at 1725.607 kb on - strand at 1725.608 kb on + strand at 1725.626 kb on + strand at 1725.675 kb on + strand at 1725.710 kb on - strand at 1725.718 kb on - strand at 1725.718 kb on - strand at 1725.728 kb on - strand at 1725.747 kb on - strand at 1725.750 kb on + strand at 1725.751 kb on - strand at 1725.856 kb on - strand at 1725.874 kb on + strand at 1725.921 kb on - strand at 1725.991 kb on - strand at 1726.023 kb on - strand at 1726.037 kb on + strand at 1726.037 kb on + strand at 1726.037 kb on + strand at 1726.041 kb on + strand at 1726.041 kb on + strand at 1726.042 kb on - strand at 1726.042 kb on - strand at 1726.097 kb on - strand at 1726.102 kb on + strand at 1726.103 kb on - strand at 1726.109 kb on + strand at 1726.110 kb on - strand at 1726.174 kb on - strand, within CA264_07460 at 1726.174 kb on - strand, within CA264_07460 at 1726.214 kb on - strand, within CA264_07460 at 1726.223 kb on + strand, within CA264_07460 at 1726.228 kb on + strand, within CA264_07460 at 1726.228 kb on + strand, within CA264_07460 at 1726.290 kb on - strand, within CA264_07460 at 1726.412 kb on - strand, within CA264_07460 at 1726.694 kb on - strand, within CA264_07460 at 1726.694 kb on - strand, within CA264_07460 at 1726.694 kb on - strand, within CA264_07460 at 1726.694 kb on - strand, within CA264_07460 at 1726.819 kb on + strand, within CA264_07460 at 1726.819 kb on + strand, within CA264_07460 at 1726.820 kb on - strand, within CA264_07460 at 1726.823 kb on + strand, within CA264_07460 at 1726.823 kb on + strand, within CA264_07460 at 1726.883 kb on + strand, within CA264_07460 at 1726.883 kb on + strand, within CA264_07460 at 1726.884 kb on - strand, within CA264_07460 at 1726.884 kb on - strand, within CA264_07460 at 1726.907 kb on + strand, within CA264_07460 at 1726.940 kb on + strand, within CA264_07460 at 1726.940 kb on + strand, within CA264_07460 at 1726.940 kb on + strand, within CA264_07460 at 1726.941 kb on - strand, within CA264_07460 at 1727.022 kb on + strand, within CA264_07460 at 1727.258 kb on + strand, within CA264_07460 at 1727.258 kb on + strand, within CA264_07460 at 1727.259 kb on - strand, within CA264_07460 at 1727.259 kb on - strand, within CA264_07460 at 1727.422 kb on + strand, within CA264_07460 at 1727.422 kb on + strand, within CA264_07460 at 1727.451 kb on - strand, within CA264_07460 at 1727.451 kb on - strand, within CA264_07460 at 1727.452 kb on + strand, within CA264_07460 at 1727.452 kb on + strand, within CA264_07460 at 1727.453 kb on - strand, within CA264_07460 at 1727.453 kb on - strand, within CA264_07460 at 1727.453 kb on - strand, within CA264_07460 at 1727.589 kb on - strand, within CA264_07460 at 1727.589 kb on - strand, within CA264_07460 at 1727.591 kb on - strand, within CA264_07460 at 1727.623 kb on + strand, within CA264_07460 at 1727.971 kb on + strand, within CA264_07460 at 1728.242 kb on + strand, within CA264_07460 at 1728.242 kb on + strand, within CA264_07460 at 1728.243 kb on - strand, within CA264_07460 at 1728.315 kb on + strand at 1728.315 kb on + strand at 1728.315 kb on + strand at 1728.315 kb on + strand at 1728.316 kb on - strand at 1728.339 kb on + strand at 1728.348 kb on - strand at 1728.375 kb on - strand at 1728.377 kb on - strand at 1728.377 kb on - strand at 1728.547 kb on - strand at 1728.564 kb on - strand at 1728.571 kb on + strand at 1728.571 kb on + strand at 1728.572 kb on - strand at 1728.572 kb on - strand at 1728.572 kb on - strand at 1728.575 kb on + strand at 1728.583 kb on + strand at 1728.583 kb on + strand at 1728.583 kb on + strand at 1728.583 kb on + strand at 1728.584 kb on - strand at 1728.584 kb on - strand at 1728.599 kb on + strand at 1728.697 kb on + strand, within CA264_07465 at 1728.697 kb on + strand, within CA264_07465 at 1728.699 kb on + strand, within CA264_07465 at 1728.699 kb on + strand, within CA264_07465 at 1728.699 kb on + strand, within CA264_07465 at 1728.699 kb on + strand, within CA264_07465 at 1728.700 kb on - strand, within CA264_07465 at 1728.700 kb on - strand, within CA264_07465 at 1728.700 kb on - strand, within CA264_07465 at 1728.700 kb on - strand, within CA264_07465 at 1728.702 kb on - strand, within CA264_07465 at 1728.804 kb on + strand at 1728.804 kb on + strand at 1728.805 kb on - strand at 1728.808 kb on + strand at 1728.808 kb on + strand at 1728.808 kb on + strand at 1728.808 kb on + strand at 1728.809 kb on - strand at 1728.819 kb on + strand at 1728.820 kb on - strand at 1728.860 kb on - strand at 1728.869 kb on - strand at 1728.869 kb on - strand at 1728.869 kb on - strand at 1728.869 kb on - strand at 1728.872 kb on - strand at 1728.873 kb on + strand at 1728.873 kb on + strand at 1728.873 kb on + strand at 1728.873 kb on + strand at 1728.873 kb on + strand at 1728.874 kb on - strand at 1728.895 kb on + strand at 1729.003 kb on + strand at 1729.008 kb on + strand at 1729.010 kb on + strand at 1729.011 kb on - strand at 1729.027 kb on - strand at 1729.048 kb on + strand at 1729.048 kb on + strand at 1729.067 kb on - strand at 1729.082 kb on + strand at 1729.103 kb on + strand at 1729.113 kb on + strand at 1729.113 kb on + strand at 1729.119 kb on + strand at 1729.172 kb on - strand at 1729.173 kb on + strand at 1729.173 kb on + strand at 1729.174 kb on - strand at 1729.177 kb on + strand at 1729.178 kb on - strand at 1729.178 kb on - strand at 1729.178 kb on - strand at 1729.178 kb on - strand at 1729.180 kb on - strand at 1729.217 kb on + strand at 1729.218 kb on - strand at 1729.254 kb on + strand at 1729.254 kb on + strand at 1729.255 kb on - strand at 1729.255 kb on - strand at 1729.257 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,725,212 + CA264_07455 0.75 -3.1 1,725,213 - CA264_07455 0.75 -2.4 1,725,394 - -3.0 1,725,475 + +0.1 1,725,476 - -1.4 1,725,509 + +0.8 1,725,555 + -0.4 1,725,557 + +0.5 1,725,558 - -0.7 1,725,607 - -0.8 1,725,607 - -0.3 1,725,608 + -0.0 1,725,626 + -0.4 1,725,675 + -0.4 1,725,710 - -1.4 1,725,718 - +0.1 1,725,718 - -1.1 1,725,728 - +0.5 1,725,747 - +0.2 1,725,750 + -0.2 1,725,751 - +0.1 1,725,856 - -0.3 1,725,874 + +0.0 1,725,921 - -0.4 1,725,991 - +0.4 1,726,023 - -0.1 1,726,037 + +0.1 1,726,037 + +0.2 1,726,037 + -0.7 1,726,041 + +0.2 1,726,041 + -0.9 1,726,042 - +0.0 1,726,042 - +0.1 1,726,097 - -0.5 1,726,102 + -0.9 1,726,103 - -0.4 1,726,109 + -0.5 1,726,110 - -1.1 1,726,174 - CA264_07460 0.12 -0.0 1,726,174 - CA264_07460 0.12 +0.4 1,726,214 - CA264_07460 0.13 -1.2 1,726,223 + CA264_07460 0.14 +1.5 1,726,228 + CA264_07460 0.14 -0.1 1,726,228 + CA264_07460 0.14 -0.2 1,726,290 - CA264_07460 0.16 +0.1 1,726,412 - CA264_07460 0.21 -0.9 1,726,694 - CA264_07460 0.31 -0.3 1,726,694 - CA264_07460 0.31 -0.9 1,726,694 - CA264_07460 0.31 -0.1 1,726,694 - CA264_07460 0.31 +1.0 1,726,819 + CA264_07460 0.36 +0.5 1,726,819 + CA264_07460 0.36 -0.3 1,726,820 - CA264_07460 0.36 -0.2 1,726,823 + CA264_07460 0.36 +1.7 1,726,823 + CA264_07460 0.36 -0.3 1,726,883 + CA264_07460 0.38 +1.7 1,726,883 + CA264_07460 0.38 -0.8 1,726,884 - CA264_07460 0.38 -0.4 1,726,884 - CA264_07460 0.38 +1.0 1,726,907 + CA264_07460 0.39 -0.3 1,726,940 + CA264_07460 0.40 -1.2 1,726,940 + CA264_07460 0.40 +0.4 1,726,940 + CA264_07460 0.40 +1.1 1,726,941 - CA264_07460 0.40 +0.2 1,727,022 + CA264_07460 0.43 -0.9 1,727,258 + CA264_07460 0.52 +0.3 1,727,258 + CA264_07460 0.52 +0.0 1,727,259 - CA264_07460 0.52 -1.1 1,727,259 - CA264_07460 0.52 -0.7 1,727,422 + CA264_07460 0.58 +0.6 1,727,422 + CA264_07460 0.58 +0.5 1,727,451 - CA264_07460 0.59 -0.4 1,727,451 - CA264_07460 0.59 -1.7 1,727,452 + CA264_07460 0.59 -0.4 1,727,452 + CA264_07460 0.59 +0.7 1,727,453 - CA264_07460 0.59 -0.8 1,727,453 - CA264_07460 0.59 -0.3 1,727,453 - CA264_07460 0.59 +1.1 1,727,589 - CA264_07460 0.64 -0.2 1,727,589 - CA264_07460 0.64 -0.9 1,727,591 - CA264_07460 0.64 +0.0 1,727,623 + CA264_07460 0.65 +0.2 1,727,971 + CA264_07460 0.78 +0.3 1,728,242 + CA264_07460 0.88 -0.2 1,728,242 + CA264_07460 0.88 -0.3 1,728,243 - CA264_07460 0.88 -0.1 1,728,315 + +0.5 1,728,315 + +0.6 1,728,315 + +0.3 1,728,315 + +0.4 1,728,316 - -0.5 1,728,339 + -0.8 1,728,348 - -0.3 1,728,375 - -0.2 1,728,377 - -0.6 1,728,377 - -2.6 1,728,547 - -0.1 1,728,564 - -1.5 1,728,571 + -0.7 1,728,571 + +0.5 1,728,572 - +0.6 1,728,572 - -1.3 1,728,572 - +0.3 1,728,575 + +0.0 1,728,583 + -0.3 1,728,583 + -0.2 1,728,583 + -0.7 1,728,583 + -0.2 1,728,584 - -1.4 1,728,584 - +0.3 1,728,599 + +0.4 1,728,697 + CA264_07465 0.44 -0.5 1,728,697 + CA264_07465 0.44 +0.3 1,728,699 + CA264_07465 0.45 +0.8 1,728,699 + CA264_07465 0.45 -0.3 1,728,699 + CA264_07465 0.45 +0.2 1,728,699 + CA264_07465 0.45 +0.0 1,728,700 - CA264_07465 0.45 -0.1 1,728,700 - CA264_07465 0.45 +0.1 1,728,700 - CA264_07465 0.45 +0.4 1,728,700 - CA264_07465 0.45 -0.3 1,728,702 - CA264_07465 0.46 -0.1 1,728,804 + -0.2 1,728,804 + +0.1 1,728,805 - -0.2 1,728,808 + -0.8 1,728,808 + +0.6 1,728,808 + +0.1 1,728,808 + -0.2 1,728,809 - -0.0 1,728,819 + -0.6 1,728,820 - +0.1 1,728,860 - -0.7 1,728,869 - -0.3 1,728,869 - +0.1 1,728,869 - +1.7 1,728,869 - -2.3 1,728,872 - +0.1 1,728,873 + +0.5 1,728,873 + +0.4 1,728,873 + +0.2 1,728,873 + -0.1 1,728,873 + +0.1 1,728,874 - +0.1 1,728,895 + -0.2 1,729,003 + +0.0 1,729,008 + -0.1 1,729,010 + +0.2 1,729,011 - -0.2 1,729,027 - -0.1 1,729,048 + -0.1 1,729,048 + -0.2 1,729,067 - -0.9 1,729,082 + +0.1 1,729,103 + +1.2 1,729,113 + -0.1 1,729,113 + -0.2 1,729,119 + -0.4 1,729,172 - -0.1 1,729,173 + -0.4 1,729,173 + +0.1 1,729,174 - +0.3 1,729,177 + -0.4 1,729,178 - +0.1 1,729,178 - -0.2 1,729,178 - +0.7 1,729,178 - -0.8 1,729,180 - +0.6 1,729,217 + +0.6 1,729,218 - -0.9 1,729,254 + +0.0 1,729,254 + -0.2 1,729,255 - -0.1 1,729,255 - -0.5 1,729,257 + -1.4
Or see this region's nucleotide sequence