Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07450 and CA264_07455 are separated by 195 nucleotides CA264_07455 and CA264_07460 are separated by 445 nucleotides
CA264_07450: CA264_07450 - trehalose-phosphatase, at 1,720,449 to 1,724,436
_07450
CA264_07455: CA264_07455 - hydrolase, at 1,724,632 to 1,725,408
_07455
CA264_07460: CA264_07460 - hypothetical protein, at 1,725,854 to 1,728,571
_07460
Position (kb)
1724
1725
1726 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1723.677 kb on + strand, within CA264_07450 at 1723.678 kb on - strand, within CA264_07450 at 1723.678 kb on - strand, within CA264_07450 at 1723.678 kb on - strand, within CA264_07450 at 1723.678 kb on - strand, within CA264_07450 at 1723.678 kb on - strand, within CA264_07450 at 1723.686 kb on + strand, within CA264_07450 at 1723.686 kb on + strand, within CA264_07450 at 1723.687 kb on - strand, within CA264_07450 at 1723.900 kb on + strand, within CA264_07450 at 1723.972 kb on + strand, within CA264_07450 at 1723.973 kb on - strand, within CA264_07450 at 1723.973 kb on - strand, within CA264_07450 at 1723.999 kb on + strand, within CA264_07450 at 1724.061 kb on - strand at 1724.109 kb on + strand at 1724.152 kb on + strand at 1724.153 kb on - strand at 1724.153 kb on - strand at 1724.213 kb on + strand at 1724.231 kb on - strand at 1724.260 kb on + strand at 1724.260 kb on + strand at 1724.271 kb on - strand at 1724.272 kb on + strand at 1724.272 kb on + strand at 1724.273 kb on - strand at 1724.393 kb on - strand at 1724.485 kb on - strand at 1724.497 kb on + strand at 1724.571 kb on - strand at 1724.614 kb on - strand at 1724.617 kb on + strand at 1724.638 kb on - strand at 1724.725 kb on - strand, within CA264_07455 at 1724.726 kb on + strand, within CA264_07455 at 1725.212 kb on + strand, within CA264_07455 at 1725.213 kb on - strand, within CA264_07455 at 1725.394 kb on - strand at 1725.475 kb on + strand at 1725.476 kb on - strand at 1725.509 kb on + strand at 1725.555 kb on + strand at 1725.557 kb on + strand at 1725.558 kb on - strand at 1725.607 kb on - strand at 1725.607 kb on - strand at 1725.608 kb on + strand at 1725.626 kb on + strand at 1725.675 kb on + strand at 1725.710 kb on - strand at 1725.718 kb on - strand at 1725.718 kb on - strand at 1725.728 kb on - strand at 1725.747 kb on - strand at 1725.750 kb on + strand at 1725.751 kb on - strand at 1725.856 kb on - strand at 1725.874 kb on + strand at 1725.921 kb on - strand at 1725.991 kb on - strand at 1726.023 kb on - strand at 1726.037 kb on + strand at 1726.037 kb on + strand at 1726.037 kb on + strand at 1726.041 kb on + strand at 1726.041 kb on + strand at 1726.042 kb on - strand at 1726.042 kb on - strand at 1726.097 kb on - strand at 1726.102 kb on + strand at 1726.103 kb on - strand at 1726.109 kb on + strand at 1726.110 kb on - strand at 1726.174 kb on - strand, within CA264_07460 at 1726.174 kb on - strand, within CA264_07460 at 1726.214 kb on - strand, within CA264_07460 at 1726.223 kb on + strand, within CA264_07460 at 1726.228 kb on + strand, within CA264_07460 at 1726.228 kb on + strand, within CA264_07460 at 1726.290 kb on - strand, within CA264_07460
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,723,677 + CA264_07450 0.81 +0.1 1,723,678 - CA264_07450 0.81 +0.4 1,723,678 - CA264_07450 0.81 -0.2 1,723,678 - CA264_07450 0.81 +0.2 1,723,678 - CA264_07450 0.81 -0.1 1,723,678 - CA264_07450 0.81 +0.6 1,723,686 + CA264_07450 0.81 +1.2 1,723,686 + CA264_07450 0.81 +0.2 1,723,687 - CA264_07450 0.81 -1.9 1,723,900 + CA264_07450 0.87 -0.4 1,723,972 + CA264_07450 0.88 -0.1 1,723,973 - CA264_07450 0.88 -0.2 1,723,973 - CA264_07450 0.88 +0.1 1,723,999 + CA264_07450 0.89 -0.6 1,724,061 - -0.4 1,724,109 + +0.2 1,724,152 + -0.6 1,724,153 - +1.6 1,724,153 - -0.5 1,724,213 + +0.0 1,724,231 - -0.6 1,724,260 + +0.1 1,724,260 + -0.8 1,724,271 - -0.1 1,724,272 + +0.2 1,724,272 + +0.2 1,724,273 - +1.3 1,724,393 - -1.0 1,724,485 - +1.1 1,724,497 + -1.1 1,724,571 - -0.4 1,724,614 - +0.3 1,724,617 + -3.1 1,724,638 - -3.1 1,724,725 - CA264_07455 0.12 -0.4 1,724,726 + CA264_07455 0.12 -3.2 1,725,212 + CA264_07455 0.75 -3.1 1,725,213 - CA264_07455 0.75 -2.4 1,725,394 - -3.0 1,725,475 + +0.1 1,725,476 - -1.4 1,725,509 + +0.8 1,725,555 + -0.4 1,725,557 + +0.5 1,725,558 - -0.7 1,725,607 - -0.8 1,725,607 - -0.3 1,725,608 + -0.0 1,725,626 + -0.4 1,725,675 + -0.4 1,725,710 - -1.4 1,725,718 - +0.1 1,725,718 - -1.1 1,725,728 - +0.5 1,725,747 - +0.2 1,725,750 + -0.2 1,725,751 - +0.1 1,725,856 - -0.3 1,725,874 + +0.0 1,725,921 - -0.4 1,725,991 - +0.4 1,726,023 - -0.1 1,726,037 + +0.1 1,726,037 + +0.2 1,726,037 + -0.7 1,726,041 + +0.2 1,726,041 + -0.9 1,726,042 - +0.0 1,726,042 - +0.1 1,726,097 - -0.5 1,726,102 + -0.9 1,726,103 - -0.4 1,726,109 + -0.5 1,726,110 - -1.1 1,726,174 - CA264_07460 0.12 -0.0 1,726,174 - CA264_07460 0.12 +0.4 1,726,214 - CA264_07460 0.13 -1.2 1,726,223 + CA264_07460 0.14 +1.5 1,726,228 + CA264_07460 0.14 -0.1 1,726,228 + CA264_07460 0.14 -0.2 1,726,290 - CA264_07460 0.16 +0.1
Or see this region's nucleotide sequence