Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06465 and CA264_06470 are separated by 229 nucleotides CA264_06470 and CA264_06475 are separated by 112 nucleotides CA264_06475 and CA264_06480 are separated by 77 nucleotides
CA264_06465: CA264_06465 - orotate phosphoribosyltransferase, at 1,496,091 to 1,496,729
_06465
CA264_06470: CA264_06470 - YfcE family phosphodiesterase, at 1,496,959 to 1,497,459
_06470
CA264_06475: CA264_06475 - hypothetical protein, at 1,497,572 to 1,497,763
_06475
CA264_06480: CA264_06480 - threonine aldolase, at 1,497,841 to 1,498,887
_06480
Position (kb)
1497
1498 Strain fitness (log2 ratio)
-2
-1
0
1 at 1496.621 kb on + strand, within CA264_06465 at 1496.625 kb on + strand, within CA264_06465 at 1496.662 kb on - strand, within CA264_06465 at 1496.726 kb on - strand at 1496.727 kb on + strand at 1496.728 kb on - strand at 1496.728 kb on - strand at 1496.766 kb on - strand at 1496.768 kb on - strand at 1496.822 kb on + strand at 1496.844 kb on + strand at 1496.902 kb on + strand at 1496.911 kb on - strand at 1496.911 kb on - strand at 1496.958 kb on + strand at 1496.958 kb on + strand at 1497.115 kb on + strand, within CA264_06470 at 1497.125 kb on + strand, within CA264_06470 at 1497.125 kb on + strand, within CA264_06470 at 1497.126 kb on - strand, within CA264_06470 at 1497.126 kb on - strand, within CA264_06470 at 1497.126 kb on - strand, within CA264_06470 at 1497.150 kb on - strand, within CA264_06470 at 1497.226 kb on + strand, within CA264_06470 at 1497.227 kb on - strand, within CA264_06470 at 1497.251 kb on + strand, within CA264_06470 at 1497.252 kb on - strand, within CA264_06470 at 1497.399 kb on + strand, within CA264_06470 at 1497.551 kb on + strand at 1497.551 kb on + strand at 1497.552 kb on - strand at 1497.701 kb on + strand, within CA264_06475 at 1497.752 kb on - strand at 1497.844 kb on + strand at 1497.845 kb on + strand at 1497.845 kb on + strand at 1497.849 kb on + strand at 1497.849 kb on + strand at 1497.855 kb on - strand at 1498.047 kb on + strand, within CA264_06480 at 1498.076 kb on + strand, within CA264_06480 at 1498.076 kb on + strand, within CA264_06480 at 1498.173 kb on + strand, within CA264_06480 at 1498.218 kb on + strand, within CA264_06480 at 1498.295 kb on + strand, within CA264_06480 at 1498.322 kb on + strand, within CA264_06480 at 1498.322 kb on + strand, within CA264_06480 at 1498.323 kb on - strand, within CA264_06480 at 1498.323 kb on - strand, within CA264_06480 at 1498.323 kb on - strand, within CA264_06480 at 1498.396 kb on - strand, within CA264_06480 at 1498.409 kb on - strand, within CA264_06480 at 1498.415 kb on + strand, within CA264_06480 at 1498.415 kb on + strand, within CA264_06480 at 1498.415 kb on + strand, within CA264_06480 at 1498.415 kb on + strand, within CA264_06480 at 1498.416 kb on - strand, within CA264_06480 at 1498.417 kb on + strand, within CA264_06480 at 1498.426 kb on - strand, within CA264_06480 at 1498.455 kb on - strand, within CA264_06480 at 1498.482 kb on - strand, within CA264_06480 at 1498.576 kb on + strand, within CA264_06480 at 1498.577 kb on - strand, within CA264_06480 at 1498.596 kb on - strand, within CA264_06480 at 1498.661 kb on - strand, within CA264_06480 at 1498.661 kb on - strand, within CA264_06480 at 1498.664 kb on + strand, within CA264_06480 at 1498.664 kb on + strand, within CA264_06480 at 1498.665 kb on - strand, within CA264_06480 at 1498.665 kb on - strand, within CA264_06480 at 1498.665 kb on - strand, within CA264_06480 at 1498.686 kb on + strand, within CA264_06480
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,496,621 + CA264_06465 0.83 +1.2 1,496,625 + CA264_06465 0.84 -0.1 1,496,662 - CA264_06465 0.89 +0.2 1,496,726 - -0.7 1,496,727 + +1.5 1,496,728 - -0.3 1,496,728 - -0.9 1,496,766 - -0.9 1,496,768 - +0.8 1,496,822 + -0.1 1,496,844 + -0.4 1,496,902 + -0.1 1,496,911 - +0.9 1,496,911 - -0.6 1,496,958 + +1.1 1,496,958 + -0.5 1,497,115 + CA264_06470 0.31 +0.5 1,497,125 + CA264_06470 0.33 -0.8 1,497,125 + CA264_06470 0.33 -0.3 1,497,126 - CA264_06470 0.33 +0.0 1,497,126 - CA264_06470 0.33 -0.1 1,497,126 - CA264_06470 0.33 +1.1 1,497,150 - CA264_06470 0.38 -0.3 1,497,226 + CA264_06470 0.53 -1.4 1,497,227 - CA264_06470 0.53 +0.2 1,497,251 + CA264_06470 0.58 -0.4 1,497,252 - CA264_06470 0.58 -0.5 1,497,399 + CA264_06470 0.88 -0.6 1,497,551 + +0.6 1,497,551 + -0.6 1,497,552 - -0.9 1,497,701 + CA264_06475 0.67 -1.3 1,497,752 - -0.9 1,497,844 + +0.3 1,497,845 + -0.5 1,497,845 + -0.5 1,497,849 + -2.1 1,497,849 + +0.0 1,497,855 - -0.3 1,498,047 + CA264_06480 0.20 -0.9 1,498,076 + CA264_06480 0.22 -0.3 1,498,076 + CA264_06480 0.22 -0.4 1,498,173 + CA264_06480 0.32 -0.4 1,498,218 + CA264_06480 0.36 +0.7 1,498,295 + CA264_06480 0.43 -0.5 1,498,322 + CA264_06480 0.46 -0.5 1,498,322 + CA264_06480 0.46 +1.5 1,498,323 - CA264_06480 0.46 +0.1 1,498,323 - CA264_06480 0.46 -0.1 1,498,323 - CA264_06480 0.46 -1.4 1,498,396 - CA264_06480 0.53 +0.1 1,498,409 - CA264_06480 0.54 +0.3 1,498,415 + CA264_06480 0.55 +0.3 1,498,415 + CA264_06480 0.55 +0.9 1,498,415 + CA264_06480 0.55 +0.1 1,498,415 + CA264_06480 0.55 -0.5 1,498,416 - CA264_06480 0.55 -0.3 1,498,417 + CA264_06480 0.55 -0.6 1,498,426 - CA264_06480 0.56 +0.2 1,498,455 - CA264_06480 0.59 -0.0 1,498,482 - CA264_06480 0.61 -0.5 1,498,576 + CA264_06480 0.70 +0.3 1,498,577 - CA264_06480 0.70 +0.3 1,498,596 - CA264_06480 0.72 -0.4 1,498,661 - CA264_06480 0.78 -0.8 1,498,661 - CA264_06480 0.78 +0.3 1,498,664 + CA264_06480 0.79 -0.6 1,498,664 + CA264_06480 0.79 +1.0 1,498,665 - CA264_06480 0.79 -1.1 1,498,665 - CA264_06480 0.79 +0.2 1,498,665 - CA264_06480 0.79 -0.0 1,498,686 + CA264_06480 0.81 +0.6
Or see this region's nucleotide sequence