Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06250

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06245 and CA264_06250 are separated by 87 nucleotidesCA264_06250 and CA264_06255 overlap by 13 nucleotides CA264_06245: CA264_06245 - aspartate aminotransferase family protein, at 1,452,897 to 1,454,051 _06245 CA264_06250: CA264_06250 - N-acetyl-gamma-glutamyl-phosphate reductase, at 1,454,139 to 1,455,143 _06250 CA264_06255: CA264_06255 - argininosuccinate synthase, at 1,455,131 to 1,456,333 _06255 Position (kb) 1454 1455 1456Strain fitness (log2 ratio) -2 -1 0 1 2at 1453.164 kb on + strand, within CA264_06245at 1453.164 kb on + strand, within CA264_06245at 1453.165 kb on - strand, within CA264_06245at 1453.241 kb on - strand, within CA264_06245at 1453.284 kb on + strand, within CA264_06245at 1453.416 kb on + strand, within CA264_06245at 1453.590 kb on - strand, within CA264_06245at 1453.881 kb on + strand, within CA264_06245at 1453.882 kb on - strand, within CA264_06245at 1453.951 kb on + strandat 1453.964 kb on - strandat 1454.019 kb on - strandat 1454.054 kb on + strandat 1454.064 kb on - strandat 1454.066 kb on - strandat 1454.066 kb on - strandat 1454.421 kb on - strand, within CA264_06250at 1454.422 kb on + strand, within CA264_06250at 1454.552 kb on + strand, within CA264_06250at 1454.552 kb on + strand, within CA264_06250at 1454.554 kb on + strand, within CA264_06250at 1454.555 kb on - strand, within CA264_06250at 1454.641 kb on - strand, within CA264_06250at 1455.095 kb on + strandat 1455.128 kb on + strandat 1455.132 kb on + strandat 1455.247 kb on - strandat 1455.342 kb on - strand, within CA264_06255at 1455.375 kb on - strand, within CA264_06255at 1455.375 kb on - strand, within CA264_06255at 1455.467 kb on - strand, within CA264_06255at 1455.470 kb on + strand, within CA264_06255at 1455.470 kb on + strand, within CA264_06255at 1455.470 kb on + strand, within CA264_06255at 1455.536 kb on + strand, within CA264_06255at 1455.624 kb on - strand, within CA264_06255at 1455.660 kb on - strand, within CA264_06255at 1455.660 kb on - strand, within CA264_06255at 1455.861 kb on + strand, within CA264_06255at 1455.910 kb on + strand, within CA264_06255at 1455.942 kb on - strand, within CA264_06255at 1455.942 kb on - strand, within CA264_06255at 1456.015 kb on + strand, within CA264_06255at 1456.016 kb on - strand, within CA264_06255at 1456.117 kb on + strand, within CA264_06255

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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1,453,164 + CA264_06245 0.23 -0.9
1,453,164 + CA264_06245 0.23 -0.1
1,453,165 - CA264_06245 0.23 -0.3
1,453,241 - CA264_06245 0.30 -0.7
1,453,284 + CA264_06245 0.34 -0.4
1,453,416 + CA264_06245 0.45 -1.1
1,453,590 - CA264_06245 0.60 +1.9
1,453,881 + CA264_06245 0.85 -2.5
1,453,882 - CA264_06245 0.85 +0.4
1,453,951 + +0.4
1,453,964 - -0.2
1,454,019 - -0.5
1,454,054 + -0.1
1,454,064 - -0.8
1,454,066 - -1.1
1,454,066 - -1.9
1,454,421 - CA264_06250 0.28 +1.1
1,454,422 + CA264_06250 0.28 -0.9
1,454,552 + CA264_06250 0.41 -0.9
1,454,552 + CA264_06250 0.41 -0.1
1,454,554 + CA264_06250 0.41 -1.9
1,454,555 - CA264_06250 0.41 -0.1
1,454,641 - CA264_06250 0.50 -2.0
1,455,095 + -0.3
1,455,128 + -0.7
1,455,132 + -0.3
1,455,247 - -0.1
1,455,342 - CA264_06255 0.18 -1.1
1,455,375 - CA264_06255 0.20 +0.6
1,455,375 - CA264_06255 0.20 -0.7
1,455,467 - CA264_06255 0.28 +0.6
1,455,470 + CA264_06255 0.28 -0.7
1,455,470 + CA264_06255 0.28 -1.9
1,455,470 + CA264_06255 0.28 +1.1
1,455,536 + CA264_06255 0.34 -0.7
1,455,624 - CA264_06255 0.41 -1.1
1,455,660 - CA264_06255 0.44 -0.5
1,455,660 - CA264_06255 0.44 -1.1
1,455,861 + CA264_06255 0.61 +1.6
1,455,910 + CA264_06255 0.65 -0.4
1,455,942 - CA264_06255 0.67 -0.9
1,455,942 - CA264_06255 0.67 -0.3
1,456,015 + CA264_06255 0.73 +0.0
1,456,016 - CA264_06255 0.74 -0.8
1,456,117 + CA264_06255 0.82 +0.8

Or see this region's nucleotide sequence