Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05560 and CA264_05565 are separated by 562 nucleotides CA264_05565 and CA264_05570 are separated by 54 nucleotides CA264_05570 and CA264_05575 are separated by 132 nucleotides CA264_05575 and CA264_05580 are separated by 32 nucleotides CA264_05580 and CA264_05585 are separated by 249 nucleotides
CA264_05560: CA264_05560 - hypothetical protein, at 1,294,564 to 1,295,730
_05560
CA264_05565: CA264_05565 - tRNA-Thr, at 1,296,293 to 1,296,365
_05565
CA264_05570: CA264_05570 - tRNA-Thr, at 1,296,420 to 1,296,495
_05570
CA264_05575: CA264_05575 - hypothetical protein, at 1,296,628 to 1,298,721
_05575
CA264_05580: CA264_05580 - hypothetical protein, at 1,298,754 to 1,299,323
_05580
CA264_05585: CA264_05585 - pyridoxamine 5'-phosphate oxidase, at 1,299,573 to 1,300,220
_05585
Position (kb)
1296
1297
1298
1299 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1295.731 kb on - strand at 1295.735 kb on + strand at 1295.756 kb on - strand at 1295.767 kb on - strand at 1295.786 kb on + strand at 1295.798 kb on + strand at 1295.821 kb on + strand at 1295.821 kb on + strand at 1295.823 kb on + strand at 1295.823 kb on + strand at 1295.824 kb on - strand at 1295.827 kb on - strand at 1295.827 kb on - strand at 1295.839 kb on + strand at 1295.840 kb on - strand at 1295.845 kb on + strand at 1295.846 kb on - strand at 1295.857 kb on + strand at 1295.857 kb on + strand at 1295.858 kb on - strand at 1295.858 kb on - strand at 1295.922 kb on - strand at 1295.922 kb on - strand at 1295.924 kb on - strand at 1295.924 kb on - strand at 1296.088 kb on - strand at 1296.120 kb on + strand at 1296.121 kb on - strand at 1296.121 kb on - strand at 1296.127 kb on + strand at 1296.127 kb on + strand at 1296.128 kb on - strand at 1296.133 kb on - strand at 1296.149 kb on + strand at 1296.149 kb on + strand at 1296.167 kb on - strand at 1296.168 kb on + strand at 1296.168 kb on + strand at 1296.169 kb on - strand at 1296.200 kb on - strand at 1296.200 kb on - strand at 1296.289 kb on + strand at 1296.329 kb on + strand, within CA264_05565 at 1296.400 kb on - strand at 1296.400 kb on - strand at 1296.595 kb on - strand at 1296.595 kb on - strand at 1296.828 kb on + strand at 1296.853 kb on - strand, within CA264_05575 at 1296.946 kb on - strand, within CA264_05575 at 1296.946 kb on - strand, within CA264_05575 at 1296.952 kb on - strand, within CA264_05575 at 1296.978 kb on + strand, within CA264_05575 at 1296.978 kb on + strand, within CA264_05575 at 1297.253 kb on - strand, within CA264_05575 at 1297.400 kb on + strand, within CA264_05575 at 1297.400 kb on + strand, within CA264_05575 at 1297.401 kb on - strand, within CA264_05575 at 1297.616 kb on + strand, within CA264_05575 at 1297.636 kb on + strand, within CA264_05575 at 1297.637 kb on - strand, within CA264_05575 at 1297.656 kb on + strand, within CA264_05575 at 1297.657 kb on - strand, within CA264_05575 at 1297.753 kb on + strand, within CA264_05575 at 1297.756 kb on - strand, within CA264_05575 at 1298.181 kb on + strand, within CA264_05575 at 1298.333 kb on + strand, within CA264_05575 at 1298.341 kb on - strand, within CA264_05575 at 1298.454 kb on + strand, within CA264_05575 at 1298.455 kb on - strand, within CA264_05575 at 1298.455 kb on - strand, within CA264_05575 at 1298.725 kb on + strand at 1298.725 kb on + strand at 1298.738 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.745 kb on - strand at 1298.747 kb on - strand at 1298.841 kb on + strand, within CA264_05580 at 1298.841 kb on + strand, within CA264_05580 at 1298.862 kb on - strand, within CA264_05580 at 1298.880 kb on + strand, within CA264_05580 at 1298.881 kb on - strand, within CA264_05580 at 1299.022 kb on + strand, within CA264_05580 at 1299.076 kb on + strand, within CA264_05580 at 1299.092 kb on - strand, within CA264_05580 at 1299.092 kb on - strand, within CA264_05580 at 1299.225 kb on + strand, within CA264_05580 at 1299.226 kb on - strand, within CA264_05580 at 1299.279 kb on - strand at 1299.282 kb on + strand at 1299.282 kb on + strand at 1299.282 kb on + strand at 1299.282 kb on + strand at 1299.283 kb on - strand at 1299.283 kb on - strand at 1299.341 kb on - strand at 1299.341 kb on - strand at 1299.341 kb on - strand at 1299.378 kb on + strand at 1299.400 kb on + strand at 1299.401 kb on - strand at 1299.410 kb on - strand at 1299.444 kb on + strand at 1299.468 kb on + strand at 1299.473 kb on + strand at 1299.473 kb on + strand at 1299.473 kb on + strand at 1299.477 kb on - strand at 1299.477 kb on - strand at 1299.477 kb on - strand at 1299.480 kb on + strand at 1299.480 kb on + strand at 1299.481 kb on - strand at 1299.481 kb on - strand at 1299.482 kb on + strand at 1299.482 kb on + strand at 1299.486 kb on - strand at 1299.486 kb on - strand at 1299.486 kb on - strand at 1299.486 kb on - strand at 1299.486 kb on - strand at 1299.523 kb on - strand at 1299.581 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,295,731 - -0.2 1,295,735 + +0.2 1,295,756 - -1.9 1,295,767 - +0.0 1,295,786 + +1.3 1,295,798 + +0.1 1,295,821 + -1.1 1,295,821 + -0.2 1,295,823 + -0.1 1,295,823 + -0.0 1,295,824 - -0.1 1,295,827 - -0.3 1,295,827 - +0.4 1,295,839 + -0.3 1,295,840 - -0.7 1,295,845 + -0.2 1,295,846 - -0.5 1,295,857 + -0.9 1,295,857 + -0.3 1,295,858 - +0.0 1,295,858 - -0.3 1,295,922 - -0.1 1,295,922 - -2.6 1,295,924 - +0.8 1,295,924 - -0.9 1,296,088 - +1.6 1,296,120 + -0.3 1,296,121 - +0.1 1,296,121 - +0.1 1,296,127 + -0.5 1,296,127 + -0.5 1,296,128 - -0.9 1,296,133 - -0.2 1,296,149 + +0.6 1,296,149 + +0.2 1,296,167 - -0.5 1,296,168 + +0.2 1,296,168 + -0.7 1,296,169 - -1.0 1,296,200 - -0.8 1,296,200 - +0.9 1,296,289 + -0.8 1,296,329 + CA264_05565 0.49 -1.2 1,296,400 - -0.3 1,296,400 - -0.4 1,296,595 - -0.4 1,296,595 - +2.0 1,296,828 + -0.1 1,296,853 - CA264_05575 0.11 -0.3 1,296,946 - CA264_05575 0.15 -0.5 1,296,946 - CA264_05575 0.15 +0.1 1,296,952 - CA264_05575 0.15 -0.2 1,296,978 + CA264_05575 0.17 -0.4 1,296,978 + CA264_05575 0.17 +0.6 1,297,253 - CA264_05575 0.30 -0.1 1,297,400 + CA264_05575 0.37 -0.5 1,297,400 + CA264_05575 0.37 -0.9 1,297,401 - CA264_05575 0.37 -0.6 1,297,616 + CA264_05575 0.47 +0.6 1,297,636 + CA264_05575 0.48 -0.0 1,297,637 - CA264_05575 0.48 +0.9 1,297,656 + CA264_05575 0.49 -0.4 1,297,657 - CA264_05575 0.49 -0.3 1,297,753 + CA264_05575 0.54 -1.6 1,297,756 - CA264_05575 0.54 +0.3 1,298,181 + CA264_05575 0.74 +0.2 1,298,333 + CA264_05575 0.81 -0.5 1,298,341 - CA264_05575 0.82 +0.7 1,298,454 + CA264_05575 0.87 -0.7 1,298,455 - CA264_05575 0.87 +0.3 1,298,455 - CA264_05575 0.87 -0.4 1,298,725 + +0.7 1,298,725 + -0.4 1,298,738 - -1.8 1,298,745 - -0.4 1,298,745 - -0.4 1,298,745 - +0.3 1,298,745 - +0.0 1,298,745 - -0.7 1,298,745 - -0.0 1,298,747 - -0.2 1,298,841 + CA264_05580 0.15 +0.7 1,298,841 + CA264_05580 0.15 -0.6 1,298,862 - CA264_05580 0.19 +0.1 1,298,880 + CA264_05580 0.22 -0.6 1,298,881 - CA264_05580 0.22 -0.4 1,299,022 + CA264_05580 0.47 -0.8 1,299,076 + CA264_05580 0.56 +0.4 1,299,092 - CA264_05580 0.59 +0.3 1,299,092 - CA264_05580 0.59 +0.8 1,299,225 + CA264_05580 0.83 +0.0 1,299,226 - CA264_05580 0.83 -0.5 1,299,279 - +0.5 1,299,282 + +0.1 1,299,282 + +1.1 1,299,282 + +0.4 1,299,282 + -0.3 1,299,283 - +0.2 1,299,283 - -1.4 1,299,341 - +1.3 1,299,341 - +1.1 1,299,341 - +1.3 1,299,378 + -0.9 1,299,400 + +0.2 1,299,401 - -0.0 1,299,410 - -0.6 1,299,444 + +0.2 1,299,468 + +0.6 1,299,473 + -0.2 1,299,473 + -0.9 1,299,473 + -0.7 1,299,477 - -0.5 1,299,477 - +0.1 1,299,477 - -0.3 1,299,480 + -1.5 1,299,480 + +0.1 1,299,481 - -0.5 1,299,481 - +0.9 1,299,482 + -0.2 1,299,482 + -0.4 1,299,486 - -0.9 1,299,486 - -0.1 1,299,486 - +1.1 1,299,486 - -1.0 1,299,486 - -0.3 1,299,523 - +2.7 1,299,581 - -1.1
Or see this region's nucleotide sequence