Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05515 and CA264_05520 are separated by 137 nucleotides CA264_05520 and CA264_05525 overlap by 4 nucleotides
CA264_05515: CA264_05515 - aldehyde dehydrogenase, at 1,280,140 to 1,281,672
_05515
CA264_05520: CA264_05520 - AraC family transcriptional regulator, at 1,281,810 to 1,282,736
_05520
CA264_05525: CA264_05525 - oxidoreductase, at 1,282,733 to 1,283,794
_05525
Position (kb)
1281
1282
1283 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1280.953 kb on + strand, within CA264_05515 at 1281.297 kb on + strand, within CA264_05515 at 1281.298 kb on - strand, within CA264_05515 at 1281.388 kb on + strand, within CA264_05515 at 1281.388 kb on + strand, within CA264_05515 at 1281.388 kb on + strand, within CA264_05515 at 1281.389 kb on - strand, within CA264_05515 at 1281.389 kb on - strand, within CA264_05515 at 1281.389 kb on - strand, within CA264_05515 at 1281.391 kb on - strand, within CA264_05515 at 1281.489 kb on + strand, within CA264_05515 at 1281.605 kb on + strand at 1281.606 kb on - strand at 1281.606 kb on - strand at 1281.606 kb on - strand at 1281.673 kb on - strand at 1281.678 kb on - strand at 1281.678 kb on - strand at 1281.679 kb on + strand at 1281.704 kb on + strand at 1281.740 kb on - strand at 1281.743 kb on + strand at 1281.750 kb on + strand at 1281.758 kb on + strand at 1281.800 kb on - strand at 1281.891 kb on + strand at 1281.891 kb on + strand at 1281.891 kb on + strand at 1281.892 kb on - strand at 1281.894 kb on - strand at 1281.913 kb on + strand, within CA264_05520 at 1282.271 kb on - strand, within CA264_05520 at 1282.399 kb on - strand, within CA264_05520 at 1282.415 kb on + strand, within CA264_05520 at 1282.443 kb on + strand, within CA264_05520 at 1282.443 kb on + strand, within CA264_05520 at 1282.444 kb on - strand, within CA264_05520 at 1282.460 kb on + strand, within CA264_05520 at 1282.460 kb on + strand, within CA264_05520 at 1282.548 kb on + strand, within CA264_05520 at 1282.563 kb on + strand, within CA264_05520 at 1282.563 kb on + strand, within CA264_05520 at 1282.563 kb on + strand, within CA264_05520 at 1282.638 kb on + strand, within CA264_05520 at 1282.638 kb on + strand, within CA264_05520 at 1282.639 kb on - strand, within CA264_05520 at 1282.639 kb on - strand, within CA264_05520 at 1282.639 kb on - strand, within CA264_05520 at 1282.666 kb on - strand at 1282.693 kb on + strand at 1282.694 kb on - strand at 1282.745 kb on + strand at 1282.745 kb on + strand at 1282.787 kb on + strand at 1282.788 kb on - strand at 1282.788 kb on - strand at 1282.789 kb on + strand at 1282.789 kb on + strand at 1282.789 kb on + strand at 1282.821 kb on - strand at 1282.844 kb on + strand, within CA264_05525 at 1282.844 kb on + strand, within CA264_05525 at 1282.844 kb on + strand, within CA264_05525 at 1282.854 kb on + strand, within CA264_05525 at 1282.854 kb on + strand, within CA264_05525 at 1282.855 kb on - strand, within CA264_05525 at 1282.855 kb on - strand, within CA264_05525 at 1282.878 kb on + strand, within CA264_05525 at 1282.925 kb on + strand, within CA264_05525 at 1283.035 kb on - strand, within CA264_05525 at 1283.041 kb on + strand, within CA264_05525 at 1283.099 kb on - strand, within CA264_05525 at 1283.140 kb on + strand, within CA264_05525 at 1283.199 kb on - strand, within CA264_05525 at 1283.237 kb on + strand, within CA264_05525 at 1283.262 kb on - strand, within CA264_05525 at 1283.262 kb on - strand, within CA264_05525 at 1283.309 kb on + strand, within CA264_05525 at 1283.310 kb on - strand, within CA264_05525 at 1283.349 kb on - strand, within CA264_05525 at 1283.384 kb on - strand, within CA264_05525 at 1283.396 kb on - strand, within CA264_05525 at 1283.424 kb on + strand, within CA264_05525 at 1283.426 kb on + strand, within CA264_05525 at 1283.495 kb on - strand, within CA264_05525 at 1283.507 kb on + strand, within CA264_05525 at 1283.508 kb on - strand, within CA264_05525 at 1283.576 kb on + strand, within CA264_05525 at 1283.577 kb on - strand, within CA264_05525 at 1283.725 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,280,953 + CA264_05515 0.53 -0.4 1,281,297 + CA264_05515 0.75 +0.9 1,281,298 - CA264_05515 0.76 +0.4 1,281,388 + CA264_05515 0.81 +0.3 1,281,388 + CA264_05515 0.81 +1.3 1,281,388 + CA264_05515 0.81 -0.0 1,281,389 - CA264_05515 0.81 -0.5 1,281,389 - CA264_05515 0.81 +0.1 1,281,389 - CA264_05515 0.81 +0.4 1,281,391 - CA264_05515 0.82 +0.5 1,281,489 + CA264_05515 0.88 +0.1 1,281,605 + +0.3 1,281,606 - +0.5 1,281,606 - +0.3 1,281,606 - +0.1 1,281,673 - +0.0 1,281,678 - -0.6 1,281,678 - -0.2 1,281,679 + +0.1 1,281,704 + -0.4 1,281,740 - +0.1 1,281,743 + -0.1 1,281,750 + +1.7 1,281,758 + -0.2 1,281,800 - +0.6 1,281,891 + +0.3 1,281,891 + -0.3 1,281,891 + -0.2 1,281,892 - +0.4 1,281,894 - +0.9 1,281,913 + CA264_05520 0.11 +0.3 1,282,271 - CA264_05520 0.50 -0.1 1,282,399 - CA264_05520 0.64 -0.1 1,282,415 + CA264_05520 0.65 -1.0 1,282,443 + CA264_05520 0.68 +0.3 1,282,443 + CA264_05520 0.68 +0.2 1,282,444 - CA264_05520 0.68 +0.3 1,282,460 + CA264_05520 0.70 -0.9 1,282,460 + CA264_05520 0.70 -0.9 1,282,548 + CA264_05520 0.80 +0.1 1,282,563 + CA264_05520 0.81 -0.2 1,282,563 + CA264_05520 0.81 -0.3 1,282,563 + CA264_05520 0.81 -0.0 1,282,638 + CA264_05520 0.89 +1.4 1,282,638 + CA264_05520 0.89 -0.0 1,282,639 - CA264_05520 0.89 -0.2 1,282,639 - CA264_05520 0.89 -0.1 1,282,639 - CA264_05520 0.89 +0.4 1,282,666 - +0.3 1,282,693 + +0.2 1,282,694 - -1.1 1,282,745 + -2.1 1,282,745 + -0.9 1,282,787 + -1.8 1,282,788 - -0.9 1,282,788 - -1.3 1,282,789 + -1.4 1,282,789 + -1.5 1,282,789 + -1.9 1,282,821 - -4.1 1,282,844 + CA264_05525 0.10 -1.0 1,282,844 + CA264_05525 0.10 -2.0 1,282,844 + CA264_05525 0.10 -1.8 1,282,854 + CA264_05525 0.11 -1.4 1,282,854 + CA264_05525 0.11 -1.3 1,282,855 - CA264_05525 0.11 -0.8 1,282,855 - CA264_05525 0.11 -1.5 1,282,878 + CA264_05525 0.14 -0.7 1,282,925 + CA264_05525 0.18 -0.4 1,283,035 - CA264_05525 0.28 -0.9 1,283,041 + CA264_05525 0.29 -1.2 1,283,099 - CA264_05525 0.34 -1.4 1,283,140 + CA264_05525 0.38 -0.1 1,283,199 - CA264_05525 0.44 +0.9 1,283,237 + CA264_05525 0.47 -0.2 1,283,262 - CA264_05525 0.50 +0.1 1,283,262 - CA264_05525 0.50 -1.8 1,283,309 + CA264_05525 0.54 +0.7 1,283,310 - CA264_05525 0.54 -1.5 1,283,349 - CA264_05525 0.58 -1.6 1,283,384 - CA264_05525 0.61 -1.0 1,283,396 - CA264_05525 0.62 -1.2 1,283,424 + CA264_05525 0.65 -1.9 1,283,426 + CA264_05525 0.65 -1.6 1,283,495 - CA264_05525 0.72 -1.3 1,283,507 + CA264_05525 0.73 -1.7 1,283,508 - CA264_05525 0.73 -1.8 1,283,576 + CA264_05525 0.79 -0.2 1,283,577 - CA264_05525 0.79 -1.7 1,283,725 + -0.9
Or see this region's nucleotide sequence