Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05080 and CA264_05085 overlap by 11 nucleotides CA264_05085 and CA264_05090 are separated by 1 nucleotides
CA264_05080: CA264_05080 - tryptophan synthase subunit beta, at 1,175,999 to 1,177,189
_05080
CA264_05085: CA264_05085 - tryptophan synthase subunit alpha, at 1,177,179 to 1,177,955
_05085
CA264_05090: CA264_05090 - 3-deoxy-7-phosphoheptulonate synthase, at 1,177,957 to 1,178,967
_05090
Position (kb)
1177
1178 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1176.182 kb on + strand, within CA264_05080 at 1176.183 kb on - strand, within CA264_05080 at 1176.183 kb on - strand, within CA264_05080 at 1176.210 kb on - strand, within CA264_05080 at 1176.210 kb on - strand, within CA264_05080 at 1176.210 kb on - strand, within CA264_05080 at 1176.401 kb on + strand, within CA264_05080 at 1176.401 kb on + strand, within CA264_05080 at 1176.401 kb on + strand, within CA264_05080 at 1176.414 kb on + strand, within CA264_05080 at 1176.515 kb on - strand, within CA264_05080 at 1176.675 kb on + strand, within CA264_05080 at 1176.691 kb on - strand, within CA264_05080 at 1176.765 kb on + strand, within CA264_05080 at 1176.814 kb on + strand, within CA264_05080 at 1176.821 kb on - strand, within CA264_05080 at 1176.821 kb on - strand, within CA264_05080 at 1176.821 kb on - strand, within CA264_05080 at 1176.821 kb on - strand, within CA264_05080 at 1176.821 kb on - strand, within CA264_05080 at 1176.822 kb on + strand, within CA264_05080 at 1176.822 kb on + strand, within CA264_05080 at 1176.822 kb on + strand, within CA264_05080 at 1176.822 kb on + strand, within CA264_05080 at 1176.823 kb on - strand, within CA264_05080 at 1176.823 kb on - strand, within CA264_05080 at 1176.888 kb on + strand, within CA264_05080 at 1176.899 kb on + strand, within CA264_05080 at 1176.900 kb on - strand, within CA264_05080 at 1176.904 kb on + strand, within CA264_05080 at 1176.905 kb on - strand, within CA264_05080 at 1177.117 kb on + strand at 1177.149 kb on + strand at 1177.149 kb on + strand at 1177.150 kb on - strand at 1177.162 kb on - strand at 1177.187 kb on + strand at 1177.193 kb on + strand at 1177.194 kb on - strand at 1177.235 kb on - strand at 1177.326 kb on - strand, within CA264_05085 at 1177.326 kb on - strand, within CA264_05085 at 1177.405 kb on + strand, within CA264_05085 at 1177.405 kb on + strand, within CA264_05085 at 1177.406 kb on - strand, within CA264_05085 at 1177.406 kb on - strand, within CA264_05085 at 1177.410 kb on - strand, within CA264_05085 at 1177.494 kb on + strand, within CA264_05085 at 1177.532 kb on - strand, within CA264_05085 at 1177.536 kb on - strand, within CA264_05085 at 1177.538 kb on - strand, within CA264_05085 at 1177.538 kb on - strand, within CA264_05085 at 1177.547 kb on + strand, within CA264_05085 at 1177.547 kb on + strand, within CA264_05085 at 1177.547 kb on + strand, within CA264_05085 at 1177.548 kb on - strand, within CA264_05085 at 1177.576 kb on - strand, within CA264_05085 at 1177.587 kb on + strand, within CA264_05085 at 1177.587 kb on + strand, within CA264_05085 at 1177.588 kb on - strand, within CA264_05085 at 1177.589 kb on + strand, within CA264_05085 at 1177.610 kb on + strand, within CA264_05085 at 1177.611 kb on - strand, within CA264_05085 at 1177.670 kb on - strand, within CA264_05085 at 1177.680 kb on - strand, within CA264_05085 at 1177.716 kb on - strand, within CA264_05085 at 1177.738 kb on + strand, within CA264_05085 at 1177.758 kb on + strand, within CA264_05085 at 1177.758 kb on + strand, within CA264_05085 at 1177.759 kb on - strand, within CA264_05085 at 1177.778 kb on + strand, within CA264_05085 at 1177.779 kb on - strand, within CA264_05085 at 1177.935 kb on - strand at 1177.935 kb on - strand at 1177.965 kb on - strand at 1177.965 kb on - strand at 1178.019 kb on - strand at 1178.049 kb on + strand at 1178.158 kb on + strand, within CA264_05090 at 1178.159 kb on - strand, within CA264_05090 at 1178.159 kb on - strand, within CA264_05090 at 1178.160 kb on + strand, within CA264_05090 at 1178.176 kb on - strand, within CA264_05090 at 1178.193 kb on + strand, within CA264_05090 at 1178.200 kb on - strand, within CA264_05090 at 1178.221 kb on - strand, within CA264_05090 at 1178.322 kb on - strand, within CA264_05090 at 1178.346 kb on + strand, within CA264_05090 at 1178.355 kb on + strand, within CA264_05090 at 1178.365 kb on + strand, within CA264_05090 at 1178.366 kb on - strand, within CA264_05090 at 1178.412 kb on + strand, within CA264_05090 at 1178.413 kb on - strand, within CA264_05090 at 1178.469 kb on - strand, within CA264_05090 at 1178.480 kb on + strand, within CA264_05090 at 1178.480 kb on + strand, within CA264_05090 at 1178.485 kb on + strand, within CA264_05090 at 1178.485 kb on + strand, within CA264_05090 at 1178.485 kb on + strand, within CA264_05090 at 1178.486 kb on - strand, within CA264_05090 at 1178.625 kb on + strand, within CA264_05090 at 1178.692 kb on + strand, within CA264_05090 at 1178.693 kb on - strand, within CA264_05090 at 1178.760 kb on - strand, within CA264_05090 at 1178.760 kb on - strand, within CA264_05090 at 1178.792 kb on - strand, within CA264_05090 at 1178.795 kb on + strand, within CA264_05090 at 1178.796 kb on - strand, within CA264_05090 at 1178.802 kb on + strand, within CA264_05090
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,176,182 + CA264_05080 0.15 -2.1 1,176,183 - CA264_05080 0.15 -0.4 1,176,183 - CA264_05080 0.15 +0.8 1,176,210 - CA264_05080 0.18 -1.4 1,176,210 - CA264_05080 0.18 -0.2 1,176,210 - CA264_05080 0.18 -0.7 1,176,401 + CA264_05080 0.34 -0.7 1,176,401 + CA264_05080 0.34 +1.3 1,176,401 + CA264_05080 0.34 -1.6 1,176,414 + CA264_05080 0.35 -1.0 1,176,515 - CA264_05080 0.43 +0.5 1,176,675 + CA264_05080 0.57 -0.2 1,176,691 - CA264_05080 0.58 -0.6 1,176,765 + CA264_05080 0.64 +0.3 1,176,814 + CA264_05080 0.68 -0.6 1,176,821 - CA264_05080 0.69 -0.1 1,176,821 - CA264_05080 0.69 -3.1 1,176,821 - CA264_05080 0.69 -0.3 1,176,821 - CA264_05080 0.69 +0.4 1,176,821 - CA264_05080 0.69 -0.3 1,176,822 + CA264_05080 0.69 -1.3 1,176,822 + CA264_05080 0.69 -0.5 1,176,822 + CA264_05080 0.69 +0.7 1,176,822 + CA264_05080 0.69 +0.4 1,176,823 - CA264_05080 0.69 -1.3 1,176,823 - CA264_05080 0.69 -0.6 1,176,888 + CA264_05080 0.75 +0.5 1,176,899 + CA264_05080 0.76 +0.1 1,176,900 - CA264_05080 0.76 +0.3 1,176,904 + CA264_05080 0.76 -0.7 1,176,905 - CA264_05080 0.76 -1.3 1,177,117 + -0.3 1,177,149 + -0.4 1,177,149 + +0.2 1,177,150 - +0.1 1,177,162 - -0.2 1,177,187 + -0.0 1,177,193 + -0.5 1,177,194 - -0.3 1,177,235 - +0.7 1,177,326 - CA264_05085 0.19 -0.5 1,177,326 - CA264_05085 0.19 +0.6 1,177,405 + CA264_05085 0.29 -0.3 1,177,405 + CA264_05085 0.29 -0.9 1,177,406 - CA264_05085 0.29 -0.2 1,177,406 - CA264_05085 0.29 -0.5 1,177,410 - CA264_05085 0.30 +0.2 1,177,494 + CA264_05085 0.41 -0.8 1,177,532 - CA264_05085 0.45 +0.5 1,177,536 - CA264_05085 0.46 +0.1 1,177,538 - CA264_05085 0.46 -0.1 1,177,538 - CA264_05085 0.46 -0.3 1,177,547 + CA264_05085 0.47 -1.4 1,177,547 + CA264_05085 0.47 -0.5 1,177,547 + CA264_05085 0.47 -1.0 1,177,548 - CA264_05085 0.47 -0.6 1,177,576 - CA264_05085 0.51 -0.3 1,177,587 + CA264_05085 0.53 -1.0 1,177,587 + CA264_05085 0.53 -0.0 1,177,588 - CA264_05085 0.53 +0.3 1,177,589 + CA264_05085 0.53 +0.7 1,177,610 + CA264_05085 0.55 -0.8 1,177,611 - CA264_05085 0.56 -0.7 1,177,670 - CA264_05085 0.63 -0.5 1,177,680 - CA264_05085 0.64 +1.6 1,177,716 - CA264_05085 0.69 -0.4 1,177,738 + CA264_05085 0.72 -1.8 1,177,758 + CA264_05085 0.75 -0.6 1,177,758 + CA264_05085 0.75 -0.9 1,177,759 - CA264_05085 0.75 -0.8 1,177,778 + CA264_05085 0.77 -0.7 1,177,779 - CA264_05085 0.77 +0.0 1,177,935 - -0.9 1,177,935 - -0.9 1,177,965 - -0.5 1,177,965 - +0.5 1,178,019 - +0.6 1,178,049 + +0.3 1,178,158 + CA264_05090 0.20 +0.0 1,178,159 - CA264_05090 0.20 +1.2 1,178,159 - CA264_05090 0.20 +0.6 1,178,160 + CA264_05090 0.20 -0.3 1,178,176 - CA264_05090 0.22 -0.1 1,178,193 + CA264_05090 0.23 -0.9 1,178,200 - CA264_05090 0.24 -0.5 1,178,221 - CA264_05090 0.26 -0.2 1,178,322 - CA264_05090 0.36 +1.1 1,178,346 + CA264_05090 0.38 +1.3 1,178,355 + CA264_05090 0.39 -0.8 1,178,365 + CA264_05090 0.40 +0.1 1,178,366 - CA264_05090 0.40 +0.9 1,178,412 + CA264_05090 0.45 -1.0 1,178,413 - CA264_05090 0.45 -0.5 1,178,469 - CA264_05090 0.51 +0.7 1,178,480 + CA264_05090 0.52 +0.7 1,178,480 + CA264_05090 0.52 -0.6 1,178,485 + CA264_05090 0.52 +0.1 1,178,485 + CA264_05090 0.52 +0.1 1,178,485 + CA264_05090 0.52 -0.4 1,178,486 - CA264_05090 0.52 +0.5 1,178,625 + CA264_05090 0.66 +0.3 1,178,692 + CA264_05090 0.73 -0.4 1,178,693 - CA264_05090 0.73 -0.2 1,178,760 - CA264_05090 0.79 -0.1 1,178,760 - CA264_05090 0.79 +0.6 1,178,792 - CA264_05090 0.83 -0.0 1,178,795 + CA264_05090 0.83 +0.5 1,178,796 - CA264_05090 0.83 -0.1 1,178,802 + CA264_05090 0.84 -0.2
Or see this region's nucleotide sequence