Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04565 and CA264_04570 are separated by 91 nucleotides CA264_04570 and CA264_04575 are separated by 146 nucleotides
CA264_04565: CA264_04565 - histidine--tRNA ligase, at 1,054,805 to 1,056,202
_04565
CA264_04570: CA264_04570 - undecaprenyl-phosphate glucose phosphotransferase, at 1,056,294 to 1,057,667
_04570
CA264_04575: CA264_04575 - glycosyltransferase, at 1,057,814 to 1,058,929
_04575
Position (kb)
1056
1057
1058 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1056.229 kb on - strand at 1056.232 kb on - strand at 1056.277 kb on - strand at 1056.296 kb on - strand at 1056.321 kb on - strand at 1056.327 kb on - strand at 1056.327 kb on - strand at 1056.327 kb on - strand at 1056.328 kb on + strand at 1056.328 kb on + strand at 1056.330 kb on + strand at 1056.332 kb on - strand at 1056.337 kb on + strand at 1056.337 kb on + strand at 1056.400 kb on - strand at 1056.402 kb on - strand at 1056.418 kb on + strand at 1056.418 kb on + strand at 1056.537 kb on + strand, within CA264_04570 at 1056.587 kb on + strand, within CA264_04570 at 1056.601 kb on - strand, within CA264_04570 at 1056.693 kb on + strand, within CA264_04570 at 1056.694 kb on - strand, within CA264_04570 at 1056.694 kb on - strand, within CA264_04570 at 1056.750 kb on + strand, within CA264_04570 at 1056.801 kb on + strand, within CA264_04570 at 1056.802 kb on - strand, within CA264_04570 at 1056.802 kb on - strand, within CA264_04570 at 1056.813 kb on + strand, within CA264_04570 at 1056.837 kb on + strand, within CA264_04570 at 1056.837 kb on + strand, within CA264_04570 at 1056.842 kb on + strand, within CA264_04570 at 1056.843 kb on - strand, within CA264_04570 at 1056.915 kb on + strand, within CA264_04570 at 1056.927 kb on + strand, within CA264_04570 at 1056.968 kb on - strand, within CA264_04570 at 1057.008 kb on - strand, within CA264_04570 at 1057.023 kb on + strand, within CA264_04570 at 1057.069 kb on + strand, within CA264_04570 at 1057.070 kb on - strand, within CA264_04570 at 1057.070 kb on - strand, within CA264_04570 at 1057.070 kb on - strand, within CA264_04570 at 1057.116 kb on + strand, within CA264_04570 at 1057.129 kb on + strand, within CA264_04570 at 1057.155 kb on - strand, within CA264_04570 at 1057.179 kb on - strand, within CA264_04570 at 1057.215 kb on + strand, within CA264_04570 at 1057.216 kb on - strand, within CA264_04570 at 1057.266 kb on - strand, within CA264_04570 at 1057.267 kb on + strand, within CA264_04570 at 1057.267 kb on + strand, within CA264_04570 at 1057.267 kb on + strand, within CA264_04570 at 1057.267 kb on + strand, within CA264_04570 at 1057.299 kb on - strand, within CA264_04570 at 1057.321 kb on - strand, within CA264_04570 at 1057.335 kb on + strand, within CA264_04570 at 1057.345 kb on + strand, within CA264_04570 at 1057.345 kb on + strand, within CA264_04570 at 1057.346 kb on - strand, within CA264_04570 at 1057.346 kb on - strand, within CA264_04570 at 1057.352 kb on - strand, within CA264_04570 at 1057.391 kb on + strand, within CA264_04570 at 1057.420 kb on + strand, within CA264_04570 at 1057.420 kb on + strand, within CA264_04570 at 1057.420 kb on + strand, within CA264_04570 at 1057.421 kb on - strand, within CA264_04570 at 1057.421 kb on - strand, within CA264_04570 at 1057.422 kb on + strand, within CA264_04570 at 1057.423 kb on - strand, within CA264_04570 at 1057.446 kb on + strand, within CA264_04570 at 1057.481 kb on + strand, within CA264_04570 at 1057.481 kb on + strand, within CA264_04570 at 1057.481 kb on + strand, within CA264_04570 at 1057.482 kb on - strand, within CA264_04570 at 1057.482 kb on - strand, within CA264_04570 at 1057.482 kb on - strand, within CA264_04570 at 1057.482 kb on - strand, within CA264_04570 at 1057.486 kb on + strand, within CA264_04570 at 1057.497 kb on + strand, within CA264_04570 at 1057.497 kb on + strand, within CA264_04570 at 1057.521 kb on + strand, within CA264_04570 at 1057.522 kb on - strand, within CA264_04570 at 1057.533 kb on + strand at 1057.534 kb on - strand at 1057.534 kb on - strand at 1057.537 kb on - strand at 1057.550 kb on - strand at 1057.593 kb on + strand at 1057.593 kb on + strand at 1057.594 kb on - strand at 1057.624 kb on - strand at 1057.624 kb on - strand at 1057.624 kb on - strand at 1057.641 kb on + strand at 1057.643 kb on + strand at 1057.645 kb on + strand at 1057.645 kb on + strand at 1057.646 kb on - strand at 1057.668 kb on - strand at 1057.668 kb on - strand at 1057.681 kb on + strand at 1057.682 kb on - strand at 1057.698 kb on + strand at 1057.721 kb on + strand at 1057.721 kb on + strand at 1057.722 kb on - strand at 1057.722 kb on - strand at 1057.723 kb on + strand at 1057.723 kb on + strand at 1057.724 kb on - strand at 1057.724 kb on - strand at 1057.724 kb on - strand at 1057.762 kb on - strand at 1057.762 kb on - strand at 1057.771 kb on - strand at 1057.771 kb on - strand at 1057.790 kb on - strand at 1057.798 kb on - strand at 1057.798 kb on - strand at 1057.833 kb on - strand at 1057.845 kb on - strand at 1057.846 kb on + strand at 1057.891 kb on + strand at 1057.891 kb on + strand at 1057.891 kb on + strand at 1057.894 kb on + strand at 1057.935 kb on - strand, within CA264_04575 at 1057.935 kb on - strand, within CA264_04575 at 1057.946 kb on + strand, within CA264_04575 at 1057.946 kb on + strand, within CA264_04575 at 1057.997 kb on + strand, within CA264_04575 at 1057.997 kb on + strand, within CA264_04575 at 1057.997 kb on + strand, within CA264_04575 at 1057.998 kb on - strand, within CA264_04575 at 1057.998 kb on - strand, within CA264_04575 at 1057.998 kb on - strand, within CA264_04575 at 1057.998 kb on - strand, within CA264_04575 at 1058.072 kb on - strand, within CA264_04575 at 1058.075 kb on - strand, within CA264_04575 at 1058.122 kb on + strand, within CA264_04575 at 1058.122 kb on + strand, within CA264_04575 at 1058.123 kb on - strand, within CA264_04575 at 1058.174 kb on - strand, within CA264_04575 at 1058.189 kb on - strand, within CA264_04575 at 1058.279 kb on - strand, within CA264_04575 at 1058.279 kb on - strand, within CA264_04575 at 1058.281 kb on - strand, within CA264_04575 at 1058.286 kb on - strand, within CA264_04575 at 1058.286 kb on - strand, within CA264_04575 at 1058.286 kb on - strand, within CA264_04575 at 1058.286 kb on - strand, within CA264_04575 at 1058.288 kb on + strand, within CA264_04575 at 1058.288 kb on + strand, within CA264_04575 at 1058.289 kb on - strand, within CA264_04575 at 1058.289 kb on - strand, within CA264_04575 at 1058.289 kb on - strand, within CA264_04575 at 1058.308 kb on - strand, within CA264_04575 at 1058.308 kb on - strand, within CA264_04575 at 1058.308 kb on - strand, within CA264_04575 at 1058.384 kb on - strand, within CA264_04575 at 1058.385 kb on + strand, within CA264_04575 at 1058.386 kb on - strand, within CA264_04575 at 1058.429 kb on - strand, within CA264_04575 at 1058.429 kb on - strand, within CA264_04575 at 1058.430 kb on + strand, within CA264_04575 at 1058.430 kb on + strand, within CA264_04575 at 1058.431 kb on - strand, within CA264_04575 at 1058.455 kb on + strand, within CA264_04575 at 1058.456 kb on - strand, within CA264_04575 at 1058.472 kb on - strand, within CA264_04575 at 1058.476 kb on - strand, within CA264_04575 at 1058.485 kb on + strand, within CA264_04575 at 1058.486 kb on - strand, within CA264_04575 at 1058.547 kb on + strand, within CA264_04575 at 1058.547 kb on + strand, within CA264_04575 at 1058.563 kb on - strand, within CA264_04575 at 1058.566 kb on + strand, within CA264_04575 at 1058.583 kb on + strand, within CA264_04575 at 1058.590 kb on + strand, within CA264_04575 at 1058.590 kb on + strand, within CA264_04575 at 1058.590 kb on + strand, within CA264_04575 at 1058.590 kb on + strand, within CA264_04575 at 1058.591 kb on - strand, within CA264_04575 at 1058.591 kb on - strand, within CA264_04575 at 1058.594 kb on + strand, within CA264_04575 at 1058.594 kb on + strand, within CA264_04575 at 1058.595 kb on - strand, within CA264_04575 at 1058.595 kb on - strand, within CA264_04575 at 1058.595 kb on - strand, within CA264_04575 at 1058.595 kb on - strand, within CA264_04575 at 1058.645 kb on + strand, within CA264_04575 at 1058.646 kb on - strand, within CA264_04575 at 1058.646 kb on - strand, within CA264_04575 at 1058.649 kb on - strand, within CA264_04575 at 1058.652 kb on - strand, within CA264_04575 at 1058.652 kb on - strand, within CA264_04575 at 1058.658 kb on + strand, within CA264_04575 at 1058.659 kb on - strand, within CA264_04575 at 1058.659 kb on - strand, within CA264_04575 at 1058.659 kb on - strand, within CA264_04575
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,056,229 - -0.0 1,056,232 - -0.1 1,056,277 - +0.1 1,056,296 - -0.3 1,056,321 - +0.2 1,056,327 - -0.5 1,056,327 - -0.3 1,056,327 - +0.3 1,056,328 + -0.1 1,056,328 + -0.0 1,056,330 + -0.1 1,056,332 - -0.1 1,056,337 + +0.5 1,056,337 + +1.3 1,056,400 - -0.4 1,056,402 - -0.1 1,056,418 + +0.3 1,056,418 + +0.8 1,056,537 + CA264_04570 0.18 -0.5 1,056,587 + CA264_04570 0.21 -0.2 1,056,601 - CA264_04570 0.22 +2.9 1,056,693 + CA264_04570 0.29 -0.6 1,056,694 - CA264_04570 0.29 -1.3 1,056,694 - CA264_04570 0.29 -0.1 1,056,750 + CA264_04570 0.33 +0.8 1,056,801 + CA264_04570 0.37 +1.4 1,056,802 - CA264_04570 0.37 +0.3 1,056,802 - CA264_04570 0.37 -1.2 1,056,813 + CA264_04570 0.38 -0.2 1,056,837 + CA264_04570 0.40 +0.1 1,056,837 + CA264_04570 0.40 +0.2 1,056,842 + CA264_04570 0.40 +0.9 1,056,843 - CA264_04570 0.40 -0.1 1,056,915 + CA264_04570 0.45 +0.7 1,056,927 + CA264_04570 0.46 +0.6 1,056,968 - CA264_04570 0.49 +0.6 1,057,008 - CA264_04570 0.52 -0.1 1,057,023 + CA264_04570 0.53 -0.5 1,057,069 + CA264_04570 0.56 -0.1 1,057,070 - CA264_04570 0.56 -0.1 1,057,070 - CA264_04570 0.56 +0.3 1,057,070 - CA264_04570 0.56 -0.7 1,057,116 + CA264_04570 0.60 +0.4 1,057,129 + CA264_04570 0.61 +0.1 1,057,155 - CA264_04570 0.63 +0.9 1,057,179 - CA264_04570 0.64 -0.5 1,057,215 + CA264_04570 0.67 +0.2 1,057,216 - CA264_04570 0.67 +0.2 1,057,266 - CA264_04570 0.71 +0.1 1,057,267 + CA264_04570 0.71 -0.6 1,057,267 + CA264_04570 0.71 -0.5 1,057,267 + CA264_04570 0.71 +1.1 1,057,267 + CA264_04570 0.71 -0.4 1,057,299 - CA264_04570 0.73 -0.0 1,057,321 - CA264_04570 0.75 +0.2 1,057,335 + CA264_04570 0.76 +1.8 1,057,345 + CA264_04570 0.76 +0.7 1,057,345 + CA264_04570 0.76 -0.0 1,057,346 - CA264_04570 0.77 +0.2 1,057,346 - CA264_04570 0.77 -1.8 1,057,352 - CA264_04570 0.77 -0.8 1,057,391 + CA264_04570 0.80 -1.2 1,057,420 + CA264_04570 0.82 +0.9 1,057,420 + CA264_04570 0.82 +0.5 1,057,420 + CA264_04570 0.82 +0.9 1,057,421 - CA264_04570 0.82 +0.2 1,057,421 - CA264_04570 0.82 -0.7 1,057,422 + CA264_04570 0.82 +0.3 1,057,423 - CA264_04570 0.82 +0.1 1,057,446 + CA264_04570 0.84 +0.3 1,057,481 + CA264_04570 0.86 +0.3 1,057,481 + CA264_04570 0.86 -0.2 1,057,481 + CA264_04570 0.86 +0.3 1,057,482 - CA264_04570 0.86 +0.7 1,057,482 - CA264_04570 0.86 -0.6 1,057,482 - CA264_04570 0.86 -0.2 1,057,482 - CA264_04570 0.86 -0.4 1,057,486 + CA264_04570 0.87 +0.1 1,057,497 + CA264_04570 0.88 +0.0 1,057,497 + CA264_04570 0.88 +1.8 1,057,521 + CA264_04570 0.89 +0.7 1,057,522 - CA264_04570 0.89 +0.7 1,057,533 + -1.5 1,057,534 - -0.5 1,057,534 - +0.2 1,057,537 - +0.2 1,057,550 - -0.6 1,057,593 + -0.7 1,057,593 + -0.4 1,057,594 - +0.3 1,057,624 - -0.0 1,057,624 - +0.8 1,057,624 - +0.3 1,057,641 + -0.1 1,057,643 + -0.4 1,057,645 + -0.0 1,057,645 + -0.6 1,057,646 - +0.6 1,057,668 - +0.1 1,057,668 - -0.8 1,057,681 + -0.6 1,057,682 - -0.1 1,057,698 + -0.2 1,057,721 + +0.9 1,057,721 + -0.2 1,057,722 - -1.0 1,057,722 - +0.3 1,057,723 + +0.2 1,057,723 + +1.5 1,057,724 - -0.5 1,057,724 - -1.0 1,057,724 - +0.2 1,057,762 - -0.2 1,057,762 - -1.5 1,057,771 - -0.9 1,057,771 - -0.5 1,057,790 - +0.5 1,057,798 - -0.1 1,057,798 - +0.4 1,057,833 - -0.4 1,057,845 - +0.5 1,057,846 + -0.4 1,057,891 + +0.3 1,057,891 + -1.4 1,057,891 + +0.7 1,057,894 + +0.3 1,057,935 - CA264_04575 0.11 +0.1 1,057,935 - CA264_04575 0.11 +0.4 1,057,946 + CA264_04575 0.12 +0.7 1,057,946 + CA264_04575 0.12 -1.8 1,057,997 + CA264_04575 0.16 -0.0 1,057,997 + CA264_04575 0.16 -0.6 1,057,997 + CA264_04575 0.16 -2.1 1,057,998 - CA264_04575 0.16 -0.3 1,057,998 - CA264_04575 0.16 -0.0 1,057,998 - CA264_04575 0.16 -0.8 1,057,998 - CA264_04575 0.16 -0.1 1,058,072 - CA264_04575 0.23 +0.2 1,058,075 - CA264_04575 0.23 -0.6 1,058,122 + CA264_04575 0.28 -0.2 1,058,122 + CA264_04575 0.28 -0.3 1,058,123 - CA264_04575 0.28 -0.6 1,058,174 - CA264_04575 0.32 -0.3 1,058,189 - CA264_04575 0.34 +1.2 1,058,279 - CA264_04575 0.42 -0.4 1,058,279 - CA264_04575 0.42 +0.6 1,058,281 - CA264_04575 0.42 -1.0 1,058,286 - CA264_04575 0.42 +0.4 1,058,286 - CA264_04575 0.42 -0.2 1,058,286 - CA264_04575 0.42 -0.3 1,058,286 - CA264_04575 0.42 +0.0 1,058,288 + CA264_04575 0.42 +0.1 1,058,288 + CA264_04575 0.42 -0.1 1,058,289 - CA264_04575 0.43 -0.0 1,058,289 - CA264_04575 0.43 +1.6 1,058,289 - CA264_04575 0.43 -0.7 1,058,308 - CA264_04575 0.44 +0.3 1,058,308 - CA264_04575 0.44 +0.1 1,058,308 - CA264_04575 0.44 -0.9 1,058,384 - CA264_04575 0.51 +0.3 1,058,385 + CA264_04575 0.51 +1.3 1,058,386 - CA264_04575 0.51 +0.3 1,058,429 - CA264_04575 0.55 +0.3 1,058,429 - CA264_04575 0.55 +0.4 1,058,430 + CA264_04575 0.55 +0.7 1,058,430 + CA264_04575 0.55 +0.5 1,058,431 - CA264_04575 0.55 +0.3 1,058,455 + CA264_04575 0.57 -1.1 1,058,456 - CA264_04575 0.58 +0.3 1,058,472 - CA264_04575 0.59 -0.3 1,058,476 - CA264_04575 0.59 +0.0 1,058,485 + CA264_04575 0.60 +0.0 1,058,486 - CA264_04575 0.60 +0.6 1,058,547 + CA264_04575 0.66 -1.8 1,058,547 + CA264_04575 0.66 -0.5 1,058,563 - CA264_04575 0.67 -0.2 1,058,566 + CA264_04575 0.67 +0.2 1,058,583 + CA264_04575 0.69 +0.1 1,058,590 + CA264_04575 0.70 -0.2 1,058,590 + CA264_04575 0.70 +0.2 1,058,590 + CA264_04575 0.70 +0.4 1,058,590 + CA264_04575 0.70 +0.1 1,058,591 - CA264_04575 0.70 -0.2 1,058,591 - CA264_04575 0.70 +0.1 1,058,594 + CA264_04575 0.70 +0.1 1,058,594 + CA264_04575 0.70 -0.7 1,058,595 - CA264_04575 0.70 +0.3 1,058,595 - CA264_04575 0.70 -0.5 1,058,595 - CA264_04575 0.70 +0.1 1,058,595 - CA264_04575 0.70 -0.0 1,058,645 + CA264_04575 0.74 -0.3 1,058,646 - CA264_04575 0.75 +0.2 1,058,646 - CA264_04575 0.75 -1.1 1,058,649 - CA264_04575 0.75 +0.1 1,058,652 - CA264_04575 0.75 +0.4 1,058,652 - CA264_04575 0.75 -0.8 1,058,658 + CA264_04575 0.76 +0.1 1,058,659 - CA264_04575 0.76 -1.0 1,058,659 - CA264_04575 0.76 -0.6 1,058,659 - CA264_04575 0.76 -0.4
Or see this region's nucleotide sequence