Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04345 and CA264_04350 are separated by 70 nucleotides CA264_04350 and CA264_04355 are separated by 237 nucleotides
CA264_04345: CA264_04345 - CAAX protease family protein, at 1,005,384 to 1,006,319
_04345
CA264_04350: CA264_04350 - alanine dehydrogenase, at 1,006,390 to 1,007,502
_04350
CA264_04355: CA264_04355 - hypothetical protein, at 1,007,740 to 1,008,525
_04355
Position (kb)
1006
1007
1008 Strain fitness (log2 ratio)
-1
0
1 at 1005.412 kb on - strand at 1005.437 kb on - strand at 1005.470 kb on - strand at 1005.485 kb on - strand, within CA264_04345 at 1005.487 kb on + strand, within CA264_04345 at 1005.488 kb on - strand, within CA264_04345 at 1005.504 kb on + strand, within CA264_04345 at 1005.543 kb on - strand, within CA264_04345 at 1005.607 kb on + strand, within CA264_04345 at 1005.629 kb on + strand, within CA264_04345 at 1005.629 kb on + strand, within CA264_04345 at 1005.640 kb on + strand, within CA264_04345 at 1005.674 kb on - strand, within CA264_04345 at 1005.674 kb on - strand, within CA264_04345 at 1005.678 kb on + strand, within CA264_04345 at 1005.678 kb on + strand, within CA264_04345 at 1005.678 kb on + strand, within CA264_04345 at 1005.679 kb on - strand, within CA264_04345 at 1005.679 kb on - strand, within CA264_04345 at 1005.685 kb on + strand, within CA264_04345 at 1005.686 kb on - strand, within CA264_04345 at 1005.736 kb on + strand, within CA264_04345 at 1005.736 kb on + strand, within CA264_04345 at 1005.737 kb on - strand, within CA264_04345 at 1005.750 kb on - strand, within CA264_04345 at 1005.817 kb on + strand, within CA264_04345 at 1005.832 kb on - strand, within CA264_04345 at 1005.845 kb on + strand, within CA264_04345 at 1005.845 kb on + strand, within CA264_04345 at 1005.894 kb on + strand, within CA264_04345 at 1006.004 kb on - strand, within CA264_04345 at 1006.026 kb on + strand, within CA264_04345 at 1006.027 kb on - strand, within CA264_04345 at 1006.042 kb on - strand, within CA264_04345 at 1006.042 kb on - strand, within CA264_04345 at 1006.047 kb on + strand, within CA264_04345 at 1006.048 kb on - strand, within CA264_04345 at 1006.103 kb on - strand, within CA264_04345 at 1006.124 kb on - strand, within CA264_04345 at 1006.135 kb on + strand, within CA264_04345 at 1006.135 kb on + strand, within CA264_04345 at 1006.136 kb on - strand, within CA264_04345 at 1006.207 kb on + strand, within CA264_04345 at 1006.219 kb on - strand, within CA264_04345 at 1006.219 kb on - strand, within CA264_04345 at 1006.288 kb on + strand at 1006.288 kb on + strand at 1006.289 kb on - strand at 1006.301 kb on - strand at 1006.416 kb on - strand at 1006.527 kb on + strand, within CA264_04350 at 1006.527 kb on + strand, within CA264_04350 at 1006.528 kb on - strand, within CA264_04350 at 1006.532 kb on - strand, within CA264_04350 at 1006.582 kb on - strand, within CA264_04350 at 1006.636 kb on + strand, within CA264_04350 at 1006.636 kb on + strand, within CA264_04350 at 1006.836 kb on - strand, within CA264_04350 at 1007.060 kb on + strand, within CA264_04350 at 1007.259 kb on - strand, within CA264_04350 at 1007.259 kb on - strand, within CA264_04350 at 1007.335 kb on - strand, within CA264_04350 at 1007.335 kb on - strand, within CA264_04350 at 1007.337 kb on + strand, within CA264_04350 at 1007.354 kb on + strand, within CA264_04350 at 1007.398 kb on + strand at 1007.399 kb on - strand at 1007.497 kb on + strand at 1007.539 kb on - strand at 1007.559 kb on - strand at 1007.559 kb on - strand at 1007.572 kb on - strand at 1007.598 kb on - strand at 1007.675 kb on + strand at 1007.677 kb on + strand at 1007.677 kb on + strand at 1007.678 kb on - strand at 1007.714 kb on - strand at 1007.800 kb on + strand at 1007.801 kb on + strand at 1007.803 kb on + strand at 1007.803 kb on + strand at 1007.804 kb on - strand at 1007.804 kb on - strand at 1007.844 kb on + strand, within CA264_04355 at 1007.844 kb on + strand, within CA264_04355 at 1007.845 kb on - strand, within CA264_04355 at 1007.884 kb on + strand, within CA264_04355 at 1007.900 kb on + strand, within CA264_04355 at 1007.901 kb on - strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.905 kb on + strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.906 kb on - strand, within CA264_04355 at 1007.957 kb on + strand, within CA264_04355 at 1007.961 kb on + strand, within CA264_04355 at 1007.962 kb on - strand, within CA264_04355 at 1008.127 kb on - strand, within CA264_04355 at 1008.128 kb on + strand, within CA264_04355 at 1008.129 kb on - strand, within CA264_04355 at 1008.129 kb on - strand, within CA264_04355 at 1008.199 kb on - strand, within CA264_04355 at 1008.254 kb on + strand, within CA264_04355 at 1008.385 kb on + strand, within CA264_04355 at 1008.386 kb on - strand, within CA264_04355 at 1008.386 kb on - strand, within CA264_04355 at 1008.389 kb on + strand, within CA264_04355 at 1008.389 kb on + strand, within CA264_04355 at 1008.389 kb on + strand, within CA264_04355 at 1008.390 kb on - strand, within CA264_04355 at 1008.393 kb on + strand, within CA264_04355 at 1008.418 kb on - strand, within CA264_04355 at 1008.484 kb on + strand at 1008.494 kb on - strand at 1008.497 kb on - strand at 1008.497 kb on - strand at 1008.497 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 1,005,412 - +0.7 1,005,437 - +1.6 1,005,470 - -0.7 1,005,485 - CA264_04345 0.11 -1.1 1,005,487 + CA264_04345 0.11 +1.0 1,005,488 - CA264_04345 0.11 -0.4 1,005,504 + CA264_04345 0.13 +0.3 1,005,543 - CA264_04345 0.17 +0.2 1,005,607 + CA264_04345 0.24 +0.9 1,005,629 + CA264_04345 0.26 -1.6 1,005,629 + CA264_04345 0.26 -1.2 1,005,640 + CA264_04345 0.27 -0.6 1,005,674 - CA264_04345 0.31 +0.6 1,005,674 - CA264_04345 0.31 +0.1 1,005,678 + CA264_04345 0.31 -0.0 1,005,678 + CA264_04345 0.31 -0.2 1,005,678 + CA264_04345 0.31 -0.6 1,005,679 - CA264_04345 0.32 +0.0 1,005,679 - CA264_04345 0.32 -0.1 1,005,685 + CA264_04345 0.32 -0.4 1,005,686 - CA264_04345 0.32 -0.1 1,005,736 + CA264_04345 0.38 -0.7 1,005,736 + CA264_04345 0.38 -0.4 1,005,737 - CA264_04345 0.38 -0.5 1,005,750 - CA264_04345 0.39 +0.7 1,005,817 + CA264_04345 0.46 -0.9 1,005,832 - CA264_04345 0.48 +0.4 1,005,845 + CA264_04345 0.49 -0.1 1,005,845 + CA264_04345 0.49 -1.2 1,005,894 + CA264_04345 0.54 -0.1 1,006,004 - CA264_04345 0.66 +0.0 1,006,026 + CA264_04345 0.69 -0.6 1,006,027 - CA264_04345 0.69 +1.1 1,006,042 - CA264_04345 0.70 -0.2 1,006,042 - CA264_04345 0.70 -0.3 1,006,047 + CA264_04345 0.71 -0.4 1,006,048 - CA264_04345 0.71 +1.4 1,006,103 - CA264_04345 0.77 +0.6 1,006,124 - CA264_04345 0.79 +0.4 1,006,135 + CA264_04345 0.80 +0.4 1,006,135 + CA264_04345 0.80 -0.2 1,006,136 - CA264_04345 0.80 -0.5 1,006,207 + CA264_04345 0.88 -0.2 1,006,219 - CA264_04345 0.89 -0.2 1,006,219 - CA264_04345 0.89 +0.7 1,006,288 + +0.1 1,006,288 + -0.1 1,006,289 - -0.2 1,006,301 - -0.1 1,006,416 - -0.1 1,006,527 + CA264_04350 0.12 -0.9 1,006,527 + CA264_04350 0.12 +1.0 1,006,528 - CA264_04350 0.12 -1.2 1,006,532 - CA264_04350 0.13 -0.7 1,006,582 - CA264_04350 0.17 -0.3 1,006,636 + CA264_04350 0.22 +0.6 1,006,636 + CA264_04350 0.22 -0.7 1,006,836 - CA264_04350 0.40 -0.5 1,007,060 + CA264_04350 0.60 -0.7 1,007,259 - CA264_04350 0.78 -0.2 1,007,259 - CA264_04350 0.78 -0.4 1,007,335 - CA264_04350 0.85 -0.6 1,007,335 - CA264_04350 0.85 +0.2 1,007,337 + CA264_04350 0.85 -1.3 1,007,354 + CA264_04350 0.87 -0.1 1,007,398 + -0.7 1,007,399 - +0.7 1,007,497 + +0.7 1,007,539 - +0.1 1,007,559 - -0.3 1,007,559 - +0.7 1,007,572 - +0.2 1,007,598 - +0.7 1,007,675 + +0.0 1,007,677 + +1.0 1,007,677 + +0.2 1,007,678 - -0.5 1,007,714 - -0.3 1,007,800 + +0.1 1,007,801 + -0.5 1,007,803 + +0.7 1,007,803 + +0.4 1,007,804 - -0.4 1,007,804 - -1.0 1,007,844 + CA264_04355 0.13 -0.1 1,007,844 + CA264_04355 0.13 -0.3 1,007,845 - CA264_04355 0.13 +1.5 1,007,884 + CA264_04355 0.18 -0.5 1,007,900 + CA264_04355 0.20 -0.8 1,007,901 - CA264_04355 0.20 +0.4 1,007,905 + CA264_04355 0.21 +0.6 1,007,905 + CA264_04355 0.21 -0.4 1,007,905 + CA264_04355 0.21 +0.0 1,007,905 + CA264_04355 0.21 -0.6 1,007,905 + CA264_04355 0.21 +0.4 1,007,906 - CA264_04355 0.21 +0.5 1,007,906 - CA264_04355 0.21 +1.2 1,007,906 - CA264_04355 0.21 +1.5 1,007,906 - CA264_04355 0.21 -0.5 1,007,906 - CA264_04355 0.21 -1.0 1,007,906 - CA264_04355 0.21 +0.0 1,007,957 + CA264_04355 0.28 -0.3 1,007,961 + CA264_04355 0.28 -0.5 1,007,962 - CA264_04355 0.28 -0.5 1,008,127 - CA264_04355 0.49 -0.3 1,008,128 + CA264_04355 0.49 -0.5 1,008,129 - CA264_04355 0.49 -0.1 1,008,129 - CA264_04355 0.49 -0.6 1,008,199 - CA264_04355 0.58 +0.3 1,008,254 + CA264_04355 0.65 -0.3 1,008,385 + CA264_04355 0.82 -1.0 1,008,386 - CA264_04355 0.82 -0.2 1,008,386 - CA264_04355 0.82 -0.2 1,008,389 + CA264_04355 0.83 -0.0 1,008,389 + CA264_04355 0.83 -0.3 1,008,389 + CA264_04355 0.83 -1.3 1,008,390 - CA264_04355 0.83 -1.0 1,008,393 + CA264_04355 0.83 +0.4 1,008,418 - CA264_04355 0.86 -1.0 1,008,484 + -0.7 1,008,494 - +1.6 1,008,497 - -0.9 1,008,497 - +1.2 1,008,497 - +1.3
Or see this region's nucleotide sequence